Trichosporon asahii var. asahii: A1Q1_06646
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Entry
A1Q1_06646 CDS
T06566
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
A1Q1_06646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasa03019
]
A1Q1_06646
Enzymes [BR:
tasa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
A1Q1_06646
Messenger RNA biogenesis [BR:
tasa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
A1Q1_06646
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clp1
CLP1_P
Motif
Other DBs
NCBI-GeneID:
25990158
NCBI-ProteinID:
XP_014183170
UniProt:
J5RDX6
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MPSNTLSADVPTLGWWYGGQEPTTRGVPIWTKLIENMGGAYRARLEKGPLLVHSGLFLDT
PSAFTNPTLGQVKENPTRYPLLQQAVEAFDGRCSCPVVHSKADAAVDFVIVIGHEKLTIE
LQRLLAPSGVKVVPLPKSGGVVDLDDAYRELAHSQQVRTYFYGEPALPSSLAGLSGSTVP
LGLQLNPYSFQIPWDALHVLRVGEGNAAPTSALPLGSSHVLSPTRLTRVDPGGPAHVVRL
LNTVLAIVRVDPEDRLETAKSKVKEEEGEKAEEEVKEVEIDEDEVPYREEIAQREVLGFV
VITAIDTLKRKYTILSPSPGKLPSTVAIAGSIEWVDSA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcaacacactgagcgcggatgtgcccacactcggatggtggtatggtggacag
gagcccacgactcgcggcgtgccgatctggaccaagctgatcgaaaacatgggtggcgcc
taccgcgcacgactcgagaagggccctttgcttgtccacagcggactgttcctcgacacg
ccatctgccttcacgaatccgacgctgggccaggtgaaggaaaaccctacccgttaccct
ctgctgcagcaggcggtcgaagcgttcgatggtaggtgcagctgccctgttgtgcattcg
aaagctgacgcggcagtggactttgtgatcgtcatcggacatgagaagctcacgatcgag
cttcagcgtcttctcgccccgagcggcgtcaaggtcgtccctctccctaagagcggcggt
gtggtcgacctcgacgatgcgtatcgcgagctcgcgcattcgcagcaggtccgcacgtac
ttctacggcgagcctgcgctgccctcttctctcgctggactctcgggtagcactgtgcct
ctcggattacagcttaacccgtactcgttccagatcccatgggacgcgctccacgtactg
cgtgtgggtgagggcaacgcggctccgacctcggcgcttccgcttggctcgtcccatgtc
ctctcaccaactcgcctcacccgcgttgaccctggaggtcccgcccacgtcgtccgcctc
ctcaacaccgtgctcgccattgtgcgtgtcgaccctgaggaccgcctggagactgctaag
agcaaggtgaaggaggaggagggcgagaaggccgaggaggaggtcaaggaggtggagatc
gacgaggacgaggtcccgtaccgcgaggagattgcgcagcgcgaggtcctcggctttgtc
gtcatcactgccatcgacaccctcaagaggaagtacaccattctctcgccgagccccggt
aagcttccctcgactgtcgcgatcgccggatcgatcgagtgggttgattcggcttga
DBGET
integrated database retrieval system
