Trichoderma asperellum: 36613364
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Entry
36613364 CDS
T10296
Symbol
TrAFT101_003191
Name
(RefSeq) uncharacterized protein
KO
K12600
superkiller protein 3
Organism
tasp Trichoderma asperellum
Pathway
tasp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
36613364 (TrAFT101_003191)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasp03019
]
36613364 (TrAFT101_003191)
Messenger RNA biogenesis [BR:
tasp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
36613364 (TrAFT101_003191)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_CcmH_CycH
TPR_1
TPR_16
TPR_14
TPR_19
TPR_17
TPR_12
TPR_11
TPR_7
ARM_TT21_N
TPR_Slam
ARM_TT21_C
ARM_TT21
ANAPC3
ARM_TT21_2nd
Coatomer_E
HemY_N
E_motif
HAT_Syf1_CNRKL1_N
SesA
Motif
Other DBs
NCBI-GeneID:
36613364
NCBI-ProteinID:
XP_024764317
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All DBs
Position
2:2642286..2645462
Genome browser
AA seq
1058 aa
AA seq
DB search
MMTDGIASSESPFGYKLAGQYFLRSGEYETTVELMRKAIPFLNKQRHKIGLAYEKMEDDY
SICLATALIYFQSPRHHQEAKSLFDKILEHDKSSTPALIGVGLIFEEEEEYEEAIDFLTR
ALARDGSNFRVKSEAAWVKALKGDWQTARDELQECLEPLAKQGSTAKELLADTQYRIGMC
IWNMETDKQARKRRKGDCAYAYWLNALNNNLNHAPTYTSLGIFYSDYAKDKKRARRCFQK
ALELSSSEVTAAERLARSFADDGDWDRVELVAQRIVDSGKVKPPPGSKRKGISWPFAALG
VAELNKQEFHKSIVSFQAALRISPNDYHSWVGLGESYHSSGRYIAATKAILNAKKLEEDS
KEDVSGDTWFTNYMLANIKRELGEFDESITLYRVVLETHGDEEGVVLALMQTMVDNAVTS
VDKGLFGKAVHLAIDVIKFASEKSGSVLETFNFWKSIAEACSIFTSVHSRVLDFPLDSIK
SLLGSVPQEAFDVLAIVDRVGTDIIYKEVATNDHFGLELAMCLHAAILSYKQAIHVSLND
IHAQAVAYYNLGWAEYRAHTCLPSHLRKKANQYIRAAVRAFKRSIELEASNADFWNALGV
VTSDINAEISQHAFVRSLHLNERSPVAWTNLGTLALLSGDVKLANENFTRAQSNDPDYAH
AWLGQGFVALLCGEAKEAMGLFTHAMEISDSSSLPTRRHYSSSLFDQILTAPPNLNVASL
IQPLFAVNQVQSLRPDDLVFLHLGTLLQERTGEHSRAVKTLEKICAKVEVDYEKTESADD
LARFTLARIDLARAFLASGLYEQAVDCGEMALQLSGEENENELTSEQRKKARLSAHLTVG
LAQYCLKKYNEAEKSFESALEESDNNPDATCLLAQVLWAQGTEDAKEKARGALFEVIESY
PNHIQSVLLLGVIALLDQDETSLEAVVEELQGLRTNDKVTATEQSRIGEVLQAVASLGEG
KTVQDMISQVQTDIILYPYLPHGWSCLAEAAGEDGDYAAQVSLKVATRGIPPRGKLEAHG
LAKAHSCTGRVADAQRAAFLAPWEMSGWNALQAGVEGM
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgatgactgatggcattgcgagttctgaatccccctttggttataaattagcgggacag
tactttttgcgatctggagaatacgagactaccgtggaattgatgcgcaaggctattccg
ttccttaataaacaaaggcacaagattggactggcatatgaaaaaatggaggatgactat
tccatctgcctagcaactgccctcatctacttccagtctccaagacatcatcaagaggcc
aagagcttgtttgataaaattttggagcacgacaagagttcaactcccgccctgattggc
gtcggactcatatttgaagaggaagaagagtatgaagaagccatcgactttcttactcgc
gcactggctcgagatggttcaaattttcgtgttaagtctgaagctgcttgggtcaaagct
cttaagggagattggcaaacggctcgagatgagctgcaggagtgcctggaacccttggca
aagcaaggtagtacggctaaagaactgttggctgatacccaataccgaatcggaatgtgc
atttggaacatggagaccgataaacaagctcgaaagaggagaaagggcgattgcgcttat
gcttactggctaaatgctctaaacaacaacttgaaccacgctccaacgtatactagcctg
ggtatcttttacagcgactacgctaaagacaagaagcgggcacggcgatgtttccaaaaa
gccctagagctatcgtcatcagaggtaacggctgctgaacgtttggcacgctcctttgcg
gatgatggcgattgggatcgtgtggagttggttgctcagcgaatcgtcgactctggcaag
gtgaagcccccaccagggtcaaaacgtaagggaataagctggccatttgcggcgctgggt
gttgcagagctgaacaaacaagaattccacaagtcaattgtctcgtttcaggcagccctc
agaatctcaccaaacgattaccattcatgggtcggtcttggtgaatcttatcacagctct
ggccgttacattgcagccactaaagccattctcaatgctaagaaattagaagaagactcg
aaagaagatgtctccggagatacttggtttaccaattatatgcttgccaacatcaagcgt
gaattgggcgagtttgacgaatctattacactttatcgagttgtcctagagacgcatggt
gatgaagaaggagtggttcttgcgcttatgcagaccatggtggataatgctgttaccagc
gtggataagggcctgtttggaaaagcagttcatcttgctatagatgtcatcaagtttgcc
tcagagaaaagtggcagcgtgttggaaactttcaatttttggaagagcatcgccgaggct
tgctccatctttacttcagtccatagccgagtactggactttccccttgattctatcaag
tcactgttagggtcggtgccccaagaggcttttgacgtcctggccattgttgatagagtt
ggcaccgacatcatctataaagaggtcgcgacgaatgatcactttggtcttgagcttgcc
atgtgcctacatgcagctattttgagctacaagcaggctatccatgtatccttaaacgac
atccacgcacaagctgtggcttactacaaccttggatgggctgagtaccgtgctcacact
tgcctgccgtcacatctacggaaaaaggcaaatcaatacatcagggctgcagttagagca
ttcaaacgctcgattgagctagaagccagcaatgcggacttctggaacgccttgggggtg
gtgacaagtgatatcaacgcagaaatatcccagcacgcttttgtccggagcttacatttg
aatgagcgtagtcccgtggcgtggacaaaccttggaactttggcgctgctatcaggcgat
gtcaagcttgccaatgaaaatttcacaagagctcagtcaaacgatccggattatgcccat
gcatggcttggtcaaggatttgtggccctgttgtgcggtgaagccaaggaagccatggga
ctttttactcatgccatggaaatttcagactcttcgtcgctgcctacgcgccgtcactat
tcatcctcgctgtttgaccaaatattgacagctccgcccaacctgaacgtggcatcgcta
attcaacccctatttgctgttaaccaagtccaaagcttacgtcctgatgatttggtgttt
ctacatcttggcacccttttgcaagagcggacgggtgaacactctcgcgcggtcaagacc
cttgagaagatatgcgcaaaggtggaagtcgactacgaaaagacggagtctgcggatgat
ctcgcaagatttacactagctagaatcgatcttgcacgagcatttctcgcctctggactc
tatgagcaggccgttgactgcggtgaaatggcactgcagctgagtggcgaagagaacgag
aacgagttgacgagtgagcagcgcaagaaggccaggctgtcagcgcatttgactgttggc
ctggcacaatactgcctaaagaagtataacgaggcagagaagagtttcgagtcagctttg
gaagagtctgacaacaaccctgatgcgacgtgcttactggctcaagtactatgggcacag
ggcaccgaagatgcaaaggaaaaggctcgcggcgctcttttcgaagtcattgaatcgtat
cctaaccatatacaaagcgtcctgctcctcggggtcattgcactactagaccaagacgag
acaagcttagaagccgtagtagaagagcttcaaggccttcgaacgaatgacaaggtcacc
gccacagagcaatcgcgcattggcgaagtattgcaagcggtggcctccctcggagaaggc
aagacagtccaagacatgatttcgcaggtccagacagacatcatcctctacccctatctc
ccgcatggctggtcttgtcttgctgaggcggcaggcgaagatggtgattatgccgctcag
gtatcactaaaggttgctacaaggggcattccgccgcgtggtaagctggaagcgcatggc
ttggcaaaggcacattcatgtacgggcagggtggcagatgcgcagagagcggcgtttttg
gcgccgtgggagatgtctggatggaatgcattgcaagctggtgttgagggtatgtga
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