Trichoderma asperellum: 90966376
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Entry
90966376 CDS
T10296
Symbol
TrAFT101_003564
Name
(RefSeq) uncharacterized protein
KO
K10756
replication factor C subunit 3/5
Organism
tasp Trichoderma asperellum
Pathway
tasp03030
DNA replication
tasp03410
Base excision repair
tasp03420
Nucleotide excision repair
tasp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
90966376 (TrAFT101_003564)
03410 Base excision repair
90966376 (TrAFT101_003564)
03420 Nucleotide excision repair
90966376 (TrAFT101_003564)
03430 Mismatch repair
90966376 (TrAFT101_003564)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tasp03032
]
90966376 (TrAFT101_003564)
03036 Chromosome and associated proteins [BR:
tasp03036
]
90966376 (TrAFT101_003564)
03400 DNA repair and recombination proteins [BR:
tasp03400
]
90966376 (TrAFT101_003564)
DNA replication proteins [BR:
tasp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
90966376 (TrAFT101_003564)
DNA Replication Termination Factors
ELG1-RFC complex
90966376 (TrAFT101_003564)
Chromosome and associated proteins [BR:
tasp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
90966376 (TrAFT101_003564)
DNA repair and recombination proteins [BR:
tasp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
90966376 (TrAFT101_003564)
Check point factors
HRAD17(Rad24)-RFC complex
90966376 (TrAFT101_003564)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_22
AAA_30
AAA_11
AAA_16
AAA_24
AAA_19
DUF815
AAA_14
RuvB_N
AAA_5
AAA_3
ResIII
DEAD
AAA_28
DNAX_ATPase_lid
SLFN-g3_helicase
ATPase_2
Mg_chelatase
ParM_N
AAA_7
AAA_25
bpMoxR
AAA_18
RNA_helicase
nSTAND3
TniB
3HCDH_N
nSTAND6
ABC_tran
Motif
Other DBs
NCBI-GeneID:
90966376
NCBI-ProteinID:
XP_065983029
LinkDB
All DBs
Position
2:join(3806421..3806554,3806618..3807264,3807339..3807733)
Genome browser
AA seq
391 aa
AA seq
DB search
MSDYEDEMDVDGPAPSADITFSAEATKGKRSAANLPVEAEDSLPWVEKYRPVTLDDVSGH
QDILATINKFVEMNRLPHLLLYGPPGTGKTSTILALARRIYGASNMRQMVLELNASDDRG
IDVVREQIKTFASTKQIFSMGGGAAKSNSIAGFKLIILDEADAMTNTAQMALRRIMEKYT
ANTRFCIIANYAHKLSPALLSRCTRFRFSPLKEGDIRVLVEKVVEEENVKIQGEAVDALV
KLSKGDMRRALNVLQACHASSTPLRLKNEPKPPESEIKRETITTETIYNCIAAPQPEAIK
EIVETLLSTPDVTSCLNTINALKTTQGLALADIITAVMEQLTKLEVNAEVMITWLEGLAE
IEHRVAGGASEMVQTGAVVGVVRGGVELMSK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactatgaggacgagatggacgtcgatggcccggcgccatccgccgatatcacg
ttttcggctgaggcaaccaagggcaagagaagtgctgccaatctaccagttgaagccgag
gacagcttgccatgggttgaaaagtaccgaccagtaacgctcgacgatgtgtccggccac
caagacatcctcgccaccatcaacaagtttgtcgagatgaaccgccttcctcacctgctt
ctctacgggccgcctggcacaggtaaaacatcgaccatcctggctctcgcgcggcggatc
tacggcgcttccaacatgcggcagatggtgctagagctgaacgcttcggacgacagaggc
atcgacgtggtgcgagagcagatcaagacgtttgctagcaccaagcagatcttttccatg
ggcggcggcgcggccaagtcgaattccattgctggcttcaagctcatcatcctggacgag
gcggatgccatgaccaacactgcacagatggctctacgaagaatcatggagaagtacacg
gcgaacacacggttttgcatcattgccaattacgcacacaagcttagccctgcgctgcta
tctcggtgtacgaggttcagattcagtccgctaaaggaaggggatatcagagtattggtg
gagaaggtggtggaagaggagaatgtcaagattcagggcgaggctgtcgatgcgctggtg
aagctgagcaagggcgacatgcgacgggcactcaatgtgcttcaagcgtgccatgcatca
agcacaccgctgaggttaaagaacgagcccaagccgcccgagagcgagatcaagcgcgag
acgattacgacagagacgatttacaactgcattgcggcaccccagcccgaagccatcaag
gagattgtggagacgctcctgagcacgccggacgtgacgagctgcctcaacaccatcaac
gccctgaagacgacgcaaggactggcgctggccgacatcatcacggcggtgatggagcag
ctgacaaagctggaggtcaatgcagaggtcatgattacctggctggaggggctggcagag
attgagcaccgggttgctggaggggccagcgagatggtgcagacgggagcggtggtggga
gttgtgcgaggcggggtggagctgatgagcaagtga
DBGET
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