Tateyamaria sp. SN3-11: ACMHLQ_15790
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Entry
ACMHLQ_15790 CDS
T11508
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
tate Tateyamaria sp. SN3-11
Pathway
tate03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tate00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACMHLQ_15790 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tate03021
]
ACMHLQ_15790 (rpoB)
03400 DNA repair and recombination proteins [BR:
tate03400
]
ACMHLQ_15790 (rpoB)
Enzymes [BR:
tate01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACMHLQ_15790 (rpoB)
Transcription machinery [BR:
tate03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACMHLQ_15790 (rpoB)
DNA repair and recombination proteins [BR:
tate03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACMHLQ_15790 (rpoB)
BRITE hierarchy
Other DBs
NCBI-ProteinID:
XOI61846
LinkDB
All DBs
Position
2697791..2701927
Genome browser
AA seq
1378 aa
AA seq
DB search
MAQSFLGQKRLRKYYGKIREVLDMPNLIEVQKSSYDLFLNSGDAEVPTDGDGIQGVFQSV
FPIKDFNETSVLEYVKYELEKPKYDVEECQQRDMTYSAPLKVTLRLIVFDVDEDTGAKSV
KDIKEQDVFMGDMPLMTPNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAC
RIIPYRGSWLDFEFDAKDIVFARIDRRRKLPVTTLLYALGLDQEGIMDAYYNTVTYTLKK
NKGWVTPFFPDRVRGTRPTYDLVDAKTGEVIAEAGKKVTPRAVKKLIDEGTVKDLLVPFE
HIVGKFVSKDIINEENGAIYVEAGDELTLEYDKDGTLIGGTAKELIDAGITEIPVLDIDN
VNVGPYMRNTMAQDKNMNRETALMDIYRVMRPGEPPTVDAASALFDTLFFDSERYDLSAV
GRVKMNMRLALDAEDTQRTLRREDIVSCIKALVELRDGKGDIDDIDHLGNRRVRSVGELM
ENQYRVGLLRMERAIKERMSSVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNP
LSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRMCPIETPEGPNIGLINSLATFAR
VNKYGFIETPYRVVNEGQVTDEVHYMSATEEMRHTVAQANATLDEAGKFKNEMVNTRKSG
DYTLSPVDSVDLIDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLLQAEAPLV
GTGIEEVVARDSGAAIMAKRAGIIDQVDATRIVIRATHDLELGDAGVDIYRMRKFQRSNQ
NTCINQRPLVKVGDTVQKGEVIADGPSTDMGELALGKNVVVAFMPWNGYNYEDSILISER
VSRDDVFTSIHIEEFEVAARDTKLGPEEITRDIPNVGEEALRNLDEAGIVYIGADVEPGD
ILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRVKPGDFGTVVEVRVFNRHGVEK
DERALQIEREEVERLARDRDDELTILDRNIYARLGDMLLGKEIAKGPKGVKAGSNVDADL
LEAFPRSAWWQIALKDEQSAQVVEALNEQYEAQKRALDARFEDKVEKVRRGDDLPPGVMK
MVKVFVAVKRKLQPGDKMAGRHGNKGVISKVVPMEDMPFLADGTPVDFCLNPLGVPSRMN
VGQILETHMGWAARGLGLNVDEALQEYRRSGDLTPVREAMSLAYGEDVYEEGITGMDEDR
LVEAAGNVTRGVPIATPVFDGAKEADVNNALERAGFSSSGQSVLFDGRTGEQFSRPVTVG
IKYLLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQ
EMLTVKSDDVAGRTKVYESIVKGEDNFEAGVPESFNVLVKEVRGLGLNMELLDAEEDE
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaatcgttccttggccagaaacgtcttcgtaaatattacggcaaaatccgcgaa
gttctggatatgccgaacctcatcgaggtccagaaatcctcctacgacctgttcctgaac
tccggcgacgccgaagtccccactgatggggacggtattcagggcgtgttccagtcggtc
ttcccgatcaaggacttcaacgaaacatccgtccttgaatacgtcaaatacgagttggaa
aagccgaaatatgacgtcgaggaatgtcagcaacgcgacatgacctactcggcaccgctc
aaggtgacgctgcgcctgatcgtgttcgatgtcgatgaagacaccggcgccaagtccgtc
aaggacatcaaggaacaggacgtgttcatgggtgacatgcccctgatgacaccgaacggg
acgttcatcgtgaacggcaccgagcgtgtgatcgtcagccagatgcaccgctcgcccggc
gtgttctttgaccacgacaagggcaagacacactcctccggcaaactgctctttgcctgc
cgcatcattccctatcgcggcagctggctcgactttgaattcgacgccaaggacatcgtg
ttcgcccgcatcgaccgtcgccgcaaattgcccgtcacgacgctgctctatgccctgggt
ctcgaccaggaaggcatcatggatgcctattacaacaccgtcacctacacgctgaaaaag
aacaaaggctgggtcacgccgttcttccccgaccgtgtgcgcggcacccgccccacttac
gatctggtggatgccaagaccggtgaagtgattgccgaagccggcaagaaagtcacgccg
cgcgcggtgaagaagctgatcgacgaaggcacggtcaaggacctgcttgtcccgttcgaa
catatcgtgggcaagttcgtctccaaggacatcatcaacgaagaaaacggcgcgatctat
gtcgaagccggtgatgagctgaccctggaatacgacaaggacggcaccctgatcggtggc
accgccaaagagctgatcgacgcaggcatcaccgagatccccgtgctcgacatcgacaac
gtcaatgtcggcccctacatgcgcaacaccatggcgcaggacaagaacatgaaccgcgaa
accgcgctcatggacatctatcgcgtcatgcgtccgggtgaaccacccaccgtcgatgcg
gcctcggccctgttcgacacgctgttctttgacagcgagcggtatgacctgtccgccgtt
ggtcgcgtgaaaatgaacatgcgtctggctctggatgccgaagacacgcagcgcaccctg
cgccgcgaagacatcgtttcctgcatcaaggctctggttgagctgcgcgacggcaagggc
gacatcgacgacatcgaccacctcggcaaccgccgtgtgcgctcggtcggtgagctgatg
gaaaaccagtaccgcgtcggcctgcttcggatggagcgtgcgatcaaggaacgtatgtcc
tcggtcgagatcgacacggtcatgccgcaggacctgatcaacgcgaaacccgccgctgcg
gccgtgcgtgaattcttcggctcctcgcagctgtcgcagttcatggaccagaccaacccg
ctctccgaagtgacgcacaagcgtcgcctctcggcgcttgggcctggcggtctgacccgt
gagcgtgccggcttcgaggtgcgcgacgtgcacccgacccactatggccggatgtgcccg
attgaaacgcccgaagggccgaacatcggtctgatcaactcgctggccacctttgcccgc
gtgaacaagtacggctttatcgaaacaccctaccgcgtcgtgaacgaaggtcaggtgacg
gacgaagtgcactacatgtccgccaccgaggaaatgcgtcacaccgtggcgcaggccaac
gcgacgctggacgaagcgggcaagttcaagaacgagatggtcaacacccggaaatcgggt
gactacaccctgtcgcccgttgacagcgtggacctgatcgacgtcagcccgaagcagttg
gtctcggtcgctgcgtccctgatcccgttcctggaaaatgacgacgccaaccgcgctctg
atgggttcgaacatgcaacgtcaggcggttccgcttctgcaagccgaggcgccgctggtc
ggcaccggtatcgaagaagttgtggcccgtgactccggtgcggccatcatggccaagcgc
gccggtatcatcgaccaggttgatgccacacggatcgtgatccgcgccacgcatgacctc
gaactgggcgacgcaggcgtggacatctaccggatgcgcaagttccagcgctcgaaccag
aacacctgcatcaaccagcgcccgctggtgaaggtgggtgacacggttcagaagggcgaa
gtgattgccgatggtccgtccaccgatatgggtgaactcgccttgggtaaaaacgtggtc
gtcgcattcatgccgtggaacggctacaactacgaagactcgatcctgatctccgagcgc
gtgtcgcgtgatgacgtctttacctcgatccacatcgaggaattcgaagtcgccgcccgt
gacaccaagctggggccagaggaaatcacccgcgacatccccaacgtcggtgaggaagcc
ctgcgcaacctcgacgaagcgggcatcgtctatattggtgcagatgttgagccgggcgat
atcctcgtcgggaaaatcacccccaagggcgaaagcccgatgacgccggaagaaaaactg
ctgcgcgccatctttggtgagaaagcttcggacgtacgcgacacctcgctgcgtgtgaag
ccgggtgatttcggcacagttgtcgaggtgcgcgtctttaaccgccacggtgtggaaaaa
gacgaacgtgccctgcaaatcgagcgtgaggaagttgaacgcctcgcccgtgaccgcgat
gacgagctgaccattcttgaccgcaacatctatgcccgtctgggcgacatgctgctgggc
aaagagatcgccaaggggccgaaaggcgtcaaggcagggtcgaacgtcgacgctgacctg
ctcgaagcgttcccacgctcggcatggtggcagattgccctgaaagacgagcaatcggca
caggtggtcgaggccctgaacgagcaatacgaggcgcaaaagcgtgctctcgatgcccgt
ttcgaggacaaggtcgaaaaggtccgccgtggcgacgatctgccccccggggtcatgaag
atggtcaaagtgttcgtcgcggtgaagcgcaagctgcaaccgggcgacaagatggccgga
cgtcacggcaacaagggtgtgatttcgaaagtggtgccgatggaggacatgccgttcctc
gccgatggcaccccggtcgatttctgtctgaacccgctgggcgtgccctcgcgcatgaac
gtcggtcagattcttgaaacccacatgggctgggccgcgcgcggtctgggtctgaacgtg
gacgaggcgctgcaagagtatcgccgctcgggcgatctgaccccggtgcgcgaagcgatg
agcctggcctatggcgaggatgtctacgaagaaggcatcaccggcatggacgaggatcgc
ctggtcgaggccgctggcaacgtcacacgcggtgttccgatcgccacgcccgtctttgac
ggcgcgaaagaggcggatgtgaacaacgcgctggaacgtgcgggcttctcctcttcgggt
cagtcggtgctgtttgacggtcgcacgggcgagcagttcagccgccccgtgaccgtgggc
atcaagtacctgctcaaactgcaccaccttgtggacgacaagatccacgctcggtcgact
ggtccgtacagcctcgtcacacagcagccgctgggtggtaaggcgcagttcggtggtcag
cgctttggtgagatggaggtctgggcgctcgaagcctacggcgccgcctacaccctgcaa
gagatgctgacggtgaagtcggatgacgtggcaggccggaccaaagtgtacgagagcatc
gtcaagggcgaggacaacttcgaagccggcgtgccggaatcgttcaacgttctggtcaaa
gaggtccgcggcctgggcctcaacatggaactcctggatgcggaggaagatgagtga
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