Trichoderma atroviride: 25778369
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Entry
25778369 CDS
T10217
Symbol
TrAtP1_009872
Name
(RefSeq) uncharacterized protein
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
tatv Trichoderma atroviride
Pathway
tatv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
25778369 (TrAtP1_009872)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tatv03021
]
25778369 (TrAtP1_009872)
Enzymes [BR:
tatv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
25778369 (TrAtP1_009872)
Transcription machinery [BR:
tatv03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
25778369 (TrAtP1_009872)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
ORC3_ins
Microp_apicomplexa_22
Motif
Other DBs
NCBI-GeneID:
25778369
NCBI-ProteinID:
XP_013946561
UniProt:
G9NKG7
LinkDB
All DBs
Position
5:complement(join(1918890..1923747,1923818..1923999))
Genome browser
AA seq
1679 aa
AA seq
DB search
MNIAQPVASEVESVEFTFLSAKEIQAISVKRIENESTFDNLLNPVPGGLYDPALGSWGDA
PCSTCNLNQSNCPGHPGHIQLPVPVYHPVFMDQAYRLLRATCVYCKGFRLPPKDLHKYTC
QLRLLHHGLIREAHMVATIGENELAVEIQEALGEGPSEAEEEESSIDSVTRQREKFVRKC
LQGIKLKRGEAKRGKHEGAYEMRREVIKDFLTEIIKKRVCSSCGGISPTYRKDRFVKVFE
KALSAKEKAKMAQKALKFGDAMTRVHNRPASKKSKGGENGVVRINGSEVSPPGSQDIEMA
DADDDDDAGAGEDSQRYISSMEVKARLEELFHKEQDLLSLVYNAKPPTQSSSKVTPDMFF
IKVILVPPNRFRPEARTGDSQISEAQQNGLYKNILACCSRIAHVYKALEEKRSDITNMHQ
AWTELQDAVNSLIDKNKNPVQGAAAARNEEGIKQLLEKKEGLFRKNMMGKRVNYAARSVI
SPDPNIETNEIGVPPVFAKKLTYPEPVTSHNFKDMQQAVINGVDKWPGAFAIENENGQIV
NLRNKSVDDRISLANQLLAPTNSSAARMKNKKVHRHLTNGDVVLMNRQPTLHKPSIMGHR
VRVLPGEKTIRMHYANCNTYNADFDGDEMNMHFPQNEVARVEALQIADTDHQYLSGTAGK
PLRGLIQDHISVSVSLCNRDTFFTRSDYQQLVYSALRPESGHILGERLQLVPPAVIKPVP
RWTGKQVISTILANMRPPNCGGLTMSENTQLKAEQWGKNSEEGTVLIQDGEFITGILDKS
QIGPSSSGLIHAVHEIYGPSVAGKLLSSLGRLLTRYLGMRAFSCGMDDLRLTAEGEAARR
RELVAADHLGLGIAANYVSLENQQDALNPLLLERLEEVARDDSKQEGLDLLMNQGTKDIT
DAVQKALIPNGLEKSFPKNQMQAMTTSGAKGSRVNASLISCNLGQQVLEGRRVPLMVSGK
SLPCFRPFETNIRAGGYIVNRFLTGIRPQEYYFHHMAGREGLIDTAVKTSRSGYLQRCII
KGMEGLTVSYDTSVRDADGSLIQFLYGEDGLDITKQNYLKDFKFILQNVTSEAAQLKYDP
KVGERLGANRQAFQKYMKNAVKHAKAKDPNGKDPLTASFDPATNAFATSETFYEAMTEYL
KENPDGLVREKKSQDKAVSNPNQVTLNKKNAEMLFAMKYLRSLVEPGEAVGIVAGQSIGE
PSTQMTLNTFHLAGHSAKNVTLGIPRLREILMTASKTISTPAMTLYPIAELSEQDIEVFS
KSISVLRLSQVLDGVVVEEMVGKGKLRGLAKIYKINLKFFPASEYSATYAVSVSDIMTTV
EKKLLRNILAIMKREVKKRQTQTTTGTPEIGVKVGTVETARAEGAPDGAAGEDDDDDDDD
DDNDAAGAKRRANRGQAVSYGPNDDDDDAIQKDMSRGAEDDSDDEGADTAAGSNGVDKEL
GDEDGDEDGTMWSSRARKERVLKNYVEATDFQCDDKRGEWCNVTLEFEVNIPKVLMLNIV
EDAVRQTVVQQVAGIESCLVAQEKGATAINTTGVNLRAMHRYSDFIDPHRIQTNDIAAVL
EVYGVEACRSNIVQELSGVFGGHGIKVDNRHLNLIADHMTRNGDFTAFSRMGLRGNVSPF
TKMSFETTLGFLKDALMDGDWDDLTTPSSRLVMGKLGRVGTGGFDVLTQLPTYYVNSLA
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgcgcagcccgtcgcctcggaggtggagagcgtggagtttaccttcctctcc
gccaaagagatccaggccatctcggtgaagcgcatcgagaatgaaagcactttcgacaac
ctcttgaatccagtgcccggaggcctgtacgatccggcgttgggatcatggggcgatgca
ccatgttctacttgcaacctgaatcagtccaattgtccgggacatccaggccacattcaa
ctcccagtccccgtctaccacccagtcttcatggaccaggcctatcgactgctccgtgca
acctgcgtttactgcaaaggcttccgtctgcctcccaaggatctacacaaatacacctgc
caattgcgcctgcttcaccatggcctcatccgcgaagcacacatggtggctacgattgga
gagaacgagctggcagtagaaatccaggaggcgttgggagagggccccagcgaggctgag
gaggaggaatccagcatcgacagcgtcacccgacaaagagaaaaattcgttcgcaagtgt
cttcagggcatcaagctgaagaggggcgaggccaagcgaggcaagcatgaaggcgcatat
gaaatgcgccgcgaagtcatcaaggatttccttaccgagattatcaagaagagagtatgc
tctagctgtggcggaatttccccgacgtaccgaaaggaccgatttgtcaaagttttcgaa
aaggccctctccgcgaaagaaaaggcaaagatggcacaaaaggcactaaaattcggtgat
gccatgaccagagtccataatcgcccggcatccaagaaatccaagggcggcgaaaacggt
gttgttcggatcaatggctcagaggtatctcctcctgggagccaagatatcgaaatggca
gacgcagatgacgacgatgatgccggtgctggagaggattcgcaaagatacatcagctca
atggaggtaaaagcacggctagaggaactattccacaaggagcaagatttgctgtcactc
gtgtacaacgccaagcctcctacacagagctcatcaaaggttactcccgatatgttcttt
atcaaagtgattctggtgccgccgaaccgtttccgaccagaggcccgaacgggagattca
caaatctccgaagctcagcaaaacggactttataaaaacattctcgcctgctgctcaagg
attgctcacgtttacaaggctcttgaggagaaaaggtcagacattacaaacatgcaccag
gcttggacagagcttcaagatgcagtcaactcattgatcgacaaaaacaagaatcctgtg
cagggagcagctgcggcgcggaacgaggaaggaatcaagcagctgcttgagaagaaggag
ggtcttttccgtaagaacatgatgggaaagcgagtcaactacgccgcccgaagtgtcatt
tcaccagatccaaacatcgaaaccaacgaaatcggtgttcctcccgtatttgccaagaag
ctgacctatcccgagcccgtgacgagccacaacttcaaggacatgcagcaagctgtcatc
aatggcgtggacaagtggccgggcgctttcgccattgagaatgaaaacggtcagattgtg
aaccttcgcaacaagtcggtggacgatcgaatttctctcgccaaccagctcctggcgccg
acaaacagcagcgccgcccgcatgaagaacaagaaagtccaccgccatcttaccaatgga
gacgttgtcctgatgaaccgccagcccacgctacataagccgtccatcatgggacaccga
gtccgcgtgctaccgggcgaaaagactattcgaatgcactacgccaactgcaacacgtac
aatgccgatttcgacggagacgaaatgaacatgcatttcccccaaaacgaggtggcccgt
gtagaagcactgcaaattgccgataccgaccaccagtacttgtcaggcactgcgggaaag
cccctgagaggtctgattcaagatcacatttcagtgtccgtctcgctttgcaaccgagac
accttcttcacccgcagcgactaccagcagctagtatacagcgcccttcggccagaaagc
ggccatatcctgggagagcgactccagcttgtaccacccgccgtcatcaagccggtgcca
agatggacaggaaagcaggtcatcagcacaattctggcaaacatgcggccacccaactgc
ggcggactgaccatgagcgaaaacacccaactcaaggcggagcaatggggcaaaaactca
gaggaaggaactgtgcttatccaggacggcgaattcataacgggaattctcgacaagtct
cagatcggacccagctcgagcggtttgatccacgccgtgcacgagatatacggaccgtcc
gttgccggcaaactgctcagcagcttgggccgtctgctcacaagatacctcggcatgaga
gccttttcatgcggaatggacgacttgaggctaacggcagagggagaggcggcacgacga
cgggagcttgttgcggccgaccatctaggactgggcattgccgccaactacgtctctcta
gagaaccagcaagatgcgctgaatccgctcctattagagcgtctggaggaggttgcgcgc
gacgacagcaaacaggagggtctcgatctcttgatgaaccagggaacaaaggacattaca
gatgccgtgcaaaaggcgctcattcccaacggcctcgagaagagcttccccaagaaccag
atgcaggccatgactacttccggtgctaagggatctcgtgtcaacgcttccctcatttcc
tgcaacctgggacagcaggtcttggaaggtagacgtgtaccgctgatggtgagcggaaag
tcgctgccttgcttccggccatttgagacaaacatcagagcgggcggttacattgtgaat
cgattcttgactggaatccggccgcaggaatactatttccaccacatggcaggacgtgag
ggtttgattgacacagccgtcaagacatcccgctcaggttatctgcagcgttgtatcatc
aagggcatggagggccttacagtctcttacgacacatcagtgagagatgcggatggctca
ctgatccagttcctgtacggtgaagatggattggacataacaaaacaaaactacctcaag
gacttcaagtttatcctgcagaacgtgacttcggaggcggcacagctcaagtacgacccc
aaggtgggcgagcgccttggtgccaaccgccaggcgttccagaaatacatgaagaacgcc
gtcaagcacgccaaggccaaggatccgaatggcaaggaccctctgacagccagcttcgat
ccggccaccaatgcatttgccacgtcggaaacattttacgaggccatgacagagtaccta
aaggaaaaccccgatgggctggtgcgagaaaagaagagccaagacaaggccgtctccaat
cccaaccaggtgacgctgaacaagaagaatgcagagatgcttttcgccatgaagtatctg
cggtcgttggtcgagcctggagaggccgtcggcattgttgccggccagtctattggtgag
ccgtctacacagatgacgctgaacactttccatttggccggtcactcagccaagaacgtg
acgctgggtatccctcgtctgagagaaatcctgatgactgccagtaagacgatttcaacg
ccggcaatgacactataccccattgccgagctgtcagagcaggatatcgaggtcttctcc
aagtctatcagtgtgctacgcctgagccaggtgctggacggtgtcgtggttgaggaaatg
gtcggcaagggcaaactccgcggccttgccaagatttacaagatcaatctcaagttcttc
ccggcatcagagtactcggccacctatgcagtcagcgtctcggacataatgaccacggtg
gagaagaagcttttgcgcaacatcctggcaatcatgaagagggaggtcaagaagcgccag
acgcagacaacaacgggaactcccgaaattggcgtcaaggtgggcactgtcgagacagcc
cgagctgaaggagcgccggatggtgctgcaggcgaggacgacgacgatgatgatgatgac
gacgacaacgacgctgccggggcgaagcgacgagccaaccgaggccaggccgtctcctat
ggacccaatgacgacgacgatgacgctatccagaaggacatgtcacgaggggcggaggac
gactcagacgacgaaggtgccgacaccgccgctggctcaaacggcgtggataaggagctc
ggcgacgaggacggcgacgaggacggcacgatgtggtcgtcgagggcgcgaaaggagcgg
gtgctcaagaactacgtggaggcgacggatttccagtgcgacgacaagcgcggcgagtgg
tgcaacgtgacgctcgagtttgaggtcaacatccccaaggtgctgatgctcaacattgtc
gaggacgcggtgcggcagacggtggtgcagcaggtggcgggcatcgagtcgtgcctggtg
gcccaggagaagggcgcgacggccatcaacacgacgggcgtcaacctgcgcgcgatgcac
cgctacagcgactttatcgacccgcaccggatccagaccaacgacatcgcggccgtgctg
gaggtgtacggcgtggaggcgtgccgcagcaacattgtgcaggagctgtcgggcgtcttt
ggcggccacggcatcaaggtggacaaccgccacctcaacctgattgccgaccacatgacg
cgcaacggcgacttcacggcctttagccgcatgggcctgcgcggcaacgtgagccccttt
accaagatgagcttcgagacgacgctgggcttcctcaaggacgcgctgatggacggcgac
tgggacgacctgacgacgcccagcagccggctggtgatgggcaagctgggacgagtcggc
acgggcggcttcgacgtgctgacgcagctgccgacgtactatgtcaactcgctggcatag
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integrated database retrieval system
