Trichoderma atroviride: 25778460
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Entry
25778460 CDS
T10217
Symbol
TrAtP1_005619
Name
(RefSeq) uncharacterized protein
KO
K14309
nuclear pore complex protein Nup93
Organism
tatv Trichoderma atroviride
Pathway
tatv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
25778460 (TrAtP1_005619)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tatv03019
]
25778460 (TrAtP1_005619)
Messenger RNA biogenesis [BR:
tatv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
25778460 (TrAtP1_005619)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
25778460
NCBI-ProteinID:
XP_013944660
UniProt:
G9NSP3
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All DBs
Position
3:complement(join(1218000..1218320,1218398..1221490))
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AA seq
1137 aa
AA seq
DB search
MSLFGGQTTGSSLFGQPAQQQQQAQSNTTTTGGGGGLFGGGGGGGGLFGGGQQQQQQKPG
GLFGAATTATPQTGGGLFGAATTATPQATTGGLFGQAATTQNQQTPTPGGGLFGNTQNAV
AQQPKPSLFGGSALTGLGGGTTAAKPSLFGATMAAPAQQSTALPLTGGLLGGQALTAQNN
NTTSAAAQPAGAYFDSLFAKTQKAGVVNANMEDLPSLELGLGDLRHRLRKLQSKQTERAD
GKAHYLLAASGVDPSTAAKDLGLLDIQGARTERPTHGYPPADVDVETYLSNLQTKTTLSM
IQDGLERSLRDFDNFLEDNVAMEWDAQRKRIYHHFGIKPRETSVTAGRESQGGFGKSRRG
KTQGSTPRDARSSTFGTSTFQRSVIGARSRIGAHQSEFADVERATDGASKSRNEDQALRE
RQSKLAEKVRSLNASRLVGRPYPILAELAEIEQKSHEPHAPHIVEAYRAMIEIVGEDADA
ETSLSGNTAKERQFAEMYLDENPNSQLSVEMRKRILSGANAFLEKQFLREVESLIAKHPH
EAKLGGLPDITSKIKAYIRLRSARKDLVPDNTELQQIHGEYVWATVFYLIRSGHVNDAAK
YVNDNSNHFRGIDRTFSTYLNNYAASEDRRITNRKLLDRCTNEYIQRSRNAPENTIDPFR
MACYKVIGRIELNNRNLDGLNTDINDWIWLQFNLAREGDKALEMAGESYGLADLQNSIKE
IGQKHFPKTASDDNNGSCGMYFYLQILSGMFEDAVSYLYPFSYVDAVHFGLALEFYGLLR
PSDPISASNDLRTHSIKGLPQINFGPMIGYYTRDFRAADAVSAVDYLTLICLNADLGGEA
GERHSGLCHEALRELVLETREFSKLIGDIRPDGRRILGVIEGRGPLIGLDGQDDFVNTVT
LQAASFADENGRITDSVLLYHLAGEYDAVVAIVSRALSEAISLEIGEDPMRLLPVKPRGG
NNQESDQGGSLSLAAIDDPVELAKTMMTMYERDAMFYRNIQDQNKVACRVLLEMSSIKSL
VETSQWAQCLDKIRGLDILPLEAGGDASTIRAYAAKFSSLSQPVSINVPNLIMWTIISCV
RQREQLVNGQFSGNEGTRKMMVEQLKQMILDLTTYTSQLRYRFPPHLHEALARASAE
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttttcggcggacagacgaccggctcatcgctgtttggccagcccgcgcagcaa
caacaacaggcccagagcaacaccacaacgacaggtggaggaggtggattgtttggcggc
ggcggtggtggtggcgggctttttggcggcgggcagcagcaacagcaacagaagcctggg
ggtcttttcggagcagcaacaacagcgacaccacagactggcggaggtctgttcggagca
gccacgacagctacaccacaggccaccacgggcggcctatttggacaggcagcgacgact
cagaaccagcagactcctacacccggtggtggcctgtttggaaacacccagaatgcggtc
gcgcagcagccaaagccttcgctgttcggcggctcagcactgaccgggcttggtggtggc
actacagccgcgaagccttctctgtttggggctacaatggctgccccggctcagcagagc
acagccttgcctttgacgggcggccttttgggcggccaggcgctgactgcccagaataac
aacacgacgagcgcggcagcccagcccgcaggcgcctacttcgacagcctctttgcgaag
acccaaaaggccggcgtcgttaatgcaaacatggaagatctccctagtctggagctgggc
ttgggcgacttgcgccatcggttgagaaaactacaatcgaaacagaccgaaagagcggat
ggaaaggctcactatcttcttgccgcttcgggcgtggatcctagtactgcggccaaggac
ctcggcctgctcgatattcaaggtgcacgaaccgaacgaccaacacacggttatcctccg
gctgatgtcgacgtcgaaacctatttgtcgaacctgcaaacgaaaacgaccctcagcatg
attcaggatggcctggagcggtcattacgcgacttcgataactttctggaagataatgtg
gctatggagtgggatgcgcagcgaaagcgtatctaccaccatttcggcatcaagcctaga
gagacgtcagtaacggcgggtcgcgagtctcaaggcggatttggaaagtctcgacgcgga
aagactcaagggagcactccacgcgatgctcgtagcagcacgtttggtacctcgactttc
cagcgatcagttatcggagcgcgatcaaggattggggcgcatcaatctgaattcgccgat
gtcgaaagagctacagacggcgctagcaaatcaagaaatgaagatcaggccctccgtgaa
cgacagtcgaagctggctgagaaagttcgcagcctcaacgcttcacgtttggttggccgc
ccttaccccatcttggccgaactggcagaaattgagcaaaagtcccacgagccccatgca
cctcacattgtggaggcataccgcgccatgattgagattgttggtgaagatgccgatgcc
gagacgtcgcttagcggcaacacggccaaggagcgccagttcgccgagatgtatctggat
gaaaaccccaactctcagctttcagttgaaatgaggaagcgcatcttgagcggcgccaat
gctttcctcgagaagcagttcttgcgtgaggtggagtctctcattgccaagcatcctcac
gaggccaagctgggtggtctgcctgacatcactagtaagatcaaggcatacatccgcttg
cgatcagctagaaaggatttggttccggacaacactgagcttcagcaaatccatggcgag
tatgtttgggccactgttttctatctgatccgatctggtcatgtaaacgatgctgccaag
tatgtcaacgacaatagcaaccacttccgaggaatcgatcgcacgttttcgacatacctc
aacaactatgctgccagtgaagatcgcagaatcactaacaggaagcttctcgaccgctgt
acgaacgaatacatccaacgatcccgcaacgctccagagaacacaatcgaccccttccgc
atggcatgttacaaggtcattggtcggattgagctgaataatcgaaatctggatggtctc
aataccgacattaacgactggatttggctgcagttcaacttggccagagagggcgacaag
gcactggagatggctggggaatcgtacggactggcggatcttcaaaatagcatcaaggag
attggccagaagcacttccccaagactgcctctgacgataacaacggcagctgtggcatg
tacttttacctgcagatcctatctggcatgtttgaggacgctgtttcctatctctaccca
ttttcctatgtcgacgcagttcactttggtttggctcttgagttttacggcctgcttcgc
cccagtgacccgatatctgcctccaacgacttgcgcacacacagcatcaagggtcttcca
caaatcaactttggccccatgattggctactatactcgggatttccgagctgctgatgcc
gtctccgcggttgattatctcacattgatttgcctaaacgcagatcttggtggagaagct
ggagagcgtcatagcggcctttgccacgaggcattgcgagaactggtgctggagacacga
gagttcagcaagctcattggagatattcgacctgacggccgtcgcatcctaggtgttatt
gagggccgtggcccgctaattggcctcgatggtcaggatgactttgtcaataccgtcact
ctgcaagccgccagctttgctgatgagaatggtcgaatcactgactcagtactgctctat
caccttgccggcgagtatgacgcagtcgtggccattgtcagccgtgctctcagtgaggcc
atctccctggagattggagaggacccaatgcgtctcttgcccgttaagccaaggggtggc
aacaaccaggagtcagatcaaggcggcagccttagcttagcggccatcgatgaccctgtt
gagttggccaagacgatgatgaccatgtatgagcgcgacgcaatgttctaccgcaacatt
caggaccagaacaaggttgcttgccgcgttttgcttgagatgagtagcattaagagcttg
gtggagactagccagtgggctcaatgtcttgacaaaatccgtggcttggacattctccct
ctcgaggccggcggcgatgccagcacaatccgagcctacgctgccaaattctctagcctc
tcacagccagtctctatcaatgtgcctaacctgattatgtggaccatcatcagctgcgtc
aggcagagagagcagctggtcaatggccagttcagcggcaacgagggcaccaggaagatg
atggtagagcagctgaagcagatgattttggatttgacgacgtacacgagtcaactgcgg
tacaggttcccgccgcacctgcatgaggcgttggcgagggcatctgcagagtaa
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