Thermodesulfovibrio autotrophicus: V4D30_05120
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Entry
V4D30_05120 CDS
T10573
Name
(GenBank) hypothetical protein
KO
K03265
peptide chain release factor subunit 1
Organism
taut Thermodesulfovibrio autotrophicus
Brite
KEGG Orthology (KO) [BR:
taut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
V4D30_05120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taut03019
]
V4D30_05120
03012 Translation factors [BR:
taut03012
]
V4D30_05120
Messenger RNA biogenesis [BR:
taut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
V4D30_05120
Translation factors [BR:
taut03012
]
Eukaryotic type
Release factors
V4D30_05120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
baeRF_family10
baeRF_family3
eRF1_2
eRF1_3
acVLRF1
baeRF_family2
baeRF_family12
baeRF_family5
LpxI_N
Ribosomal_L7Ae
Mrpl_C
Motif
Other DBs
NCBI-ProteinID:
XCH45717
UniProt:
A0AAU8GVS7
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Position
complement(1004173..1005291)
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AA seq
372 aa
AA seq
DB search
MFERKDLERLEKFRFEDAFVVSLFLNVSPQERKKQAYLSKFKNLVKALPEKTQSSVKEDI
EKIESFLQSERESFKKSLVIYSCSKKELWVRYDLNVELKEDLIVDRTPYTSLLFDLLDNY
QKYGVVLVDKRTARVFLVFLGDIEEYGVIEHEDVPGKHKKGGWFALAEKRYERHIDYHVK
IHLKDVVDKFGDFLKDKEIRRLIVAGPDEAISHLMNMIPDEVKLKIVGRANIEKHASKEE
VLKKVLPIIEEYEKSKEKETVSELITRALKNDNSVTGIDDTLKYLRERRVMKLVIAKDYE
VEGFVCENCGFATTQPVECCMECGDCVMKSDNLLEKATEMAIEQSALVEVVKDEKDRQRL
IEYGGIGAFLRF
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagagaaaggatttagaaagacttgaaaagttcagatttgaagatgcctttgtt
gtaagtctttttcttaatgtttctccacaggagagaaaaaaacaggcttatctgtcaaaa
tttaaaaatcttgtaaaagctttaccagaaaaaactcagagctctgtcaaagaagacata
gaaaaaatagagagttttcttcagagcgaaagagaatcttttaaaaagtctcttgttatt
tatagctgcagtaaaaaagagctttgggtaaggtatgatttaaatgtggagcttaaagag
gatttaatagttgatagaactccttacacaagcctgctttttgatttacttgataattat
cagaaatatggcgttgttcttgttgacaaacgcacagcaagagtttttttagtttttctt
ggagacattgaagagtatggcgtgattgaacatgaagatgttcctggtaagcataagaaa
ggtggatggtttgcattggcagagaagagatatgaaagacacattgattaccatgtaaaa
atacatcttaaggatgttgtggataagttcggagattttcttaaagacaaagagattaga
agacttattgttgcaggtcctgatgaagcaatttcccatttgatgaatatgattcctgat
gaagtgaaactaaaaatagtaggaagggcaaacattgaaaaacatgcttcaaaggaagaa
gttttgaaaaaagtgcttccaatcattgaagaatatgaaaaatctaaggaaaaagagaca
gtttccgagcttattacaagggcattgaaaaatgacaactctgtcactggaattgatgat
actctgaaatatttaagagaaagaagagtgatgaaacttgttatagctaaggattatgaa
gtagaaggttttgtatgtgaaaactgcggttttgcaacaactcagcctgttgaatgctgt
atggaatgtggtgactgcgtaatgaaatctgataacttactggaaaaggctacagaaatg
gcaattgagcaatctgcccttgttgaggttgtaaaggatgaaaaagacagacagagactt
attgaatatggtggtatcggtgccttcttaagattttaa
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