Thiobacillus denitrificans: Tbd_0430
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Entry
Tbd_0430 CDS
T00275
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tbd
Thiobacillus denitrificans
Pathway
tbd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tbd_0430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tbd03021
]
Tbd_0430
03400 DNA repair and recombination proteins [BR:
tbd03400
]
Tbd_0430
Enzymes [BR:
tbd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tbd_0430
Transcription machinery [BR:
tbd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tbd_0430
DNA repair and recombination proteins [BR:
tbd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tbd_0430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
DUF3383
Motif
Other DBs
NCBI-ProteinID:
AAZ96383
UniProt:
Q3SLM4
LinkDB
All DBs
Position
449718..450698
Genome browser
AA seq
326 aa
AA seq
DB search
MQSATEFLKPRIVEVDRASPLHAKVIMEPFERGYGHTLGNALRRILLSSMVGYAPTEVAI
SGVVHEYSTIEGVQEDVVDILLNLKGIAFKMHGKAEAILKVSKSGEGVVTAGDIEVGHDI
EVLNPDHVIAHLTKGGKLDMEIKIEAGRGYQPATARKVSEETRAVGSILVDASFSPVRRV
AYAVESARVEQRTDLDRLVIDIETNGVVEPEEAVRTAARILVSQLSVFADLEGTPAESES
PRSPQVDPLLLRPVDDLELTVRSANCLKAENIYFIGDLIQRSETELLRTPNLGRKSLNEI
KDVLASKGLSLGMKLENWPPAGLERP
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcgccacggaatttctcaagccgcgtatcgtggaggtcgaccgtgcctcccct
ctgcacgccaaggtcatcatggagcctttcgagcgcggctatggccatacgctcggcaac
gcgctgcgtcgcatcttgttgtcttccatggtgggttatgcgccgaccgaggtcgcgatc
agcggcgtcgttcacgaatattcgacgatcgagggcgtgcaggaggatgtcgtcgacatc
ctgctgaatctcaagggcatcgcgttcaagatgcatggcaaggcggaagcgatcctcaag
gtctccaagagtggcgaaggcgtcgtcaccgcgggtgacatcgaggttggccacgacatc
gaggtgttgaacccggaccacgtcatcgcgcacctgaccaagggcggcaagctcgacatg
gaaatcaagatcgaggctggccgcggctatcagccggcgaccgcgcgcaaggtgtcggaa
gagacgcgcgctgtcggctcgattctggtcgacgcctcgttcagcccggtgcgccgcgtc
gcctatgccgtcgaaagcgcacgcgtcgagcagcgtaccgacctcgaccgtctcgtaatc
gacatcgaaaccaacggcgtcgtcgagccggaggaagcggtgcgcacggccgcgcgtatt
ctggtgagccagctgtccgtgttcgccgacctcgagggcacgccggccgagtccgagtcg
ccgcgttcgccgcaggtcgacccgctgctgctccgcccggtcgacgatctcgaactgacc
gtgcgttcggccaactgtctgaaggccgagaacatctatttcatcggcgacctgatccag
cgttccgaaaccgagctcctgcgcacgcccaacctcggccgcaagtcgctcaacgagatc
aaggatgtgctcgcgtcgaagggtctgtcgctcggcatgaagctcgaaaactggccgccg
gcggggctcgagcgtccctga
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