Trematomus bernacchii (emerald rockcod): 117468623
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Entry
117468623 CDS
T09643
Symbol
phf1
Name
(RefSeq) PHD finger protein 1 isoform X1
KO
K11467
PHD finger protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117468623 (phf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117468623 (phf1)
03036 Chromosome and associated proteins [BR:
tben03036
]
117468623 (phf1)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
117468623 (phf1)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
117468623 (phf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
TFIIA
PHD_ash2p_like
PHD_2
Chromo
Motif
Other DBs
NCBI-GeneID:
117468623
NCBI-ProteinID:
XP_033968751
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MGGVSEGDDVLARWSDGLLYLGNVKRVDGVKQCCLVRFEDNSEFWVLRKDIHSFAAGVEE
VCCICDAPPLKEPLINCLKCRHGYHPECHTPTIEPEADSDSWICRQCVFAVATKRGGALK
RGRFARLMQFMKLRLPYQLSSLDWDQQHLTNQQQCYCYCAGPGEWNLKMLQCASCGQWFH
EACTQCLTKPLLYGDRFYQFQCSVCTKGPETIQRLPMTWMDLAHLVLYHLSLCCKRKYFD
FDHEILSFTNENWDSLLLGALSDTPRQDRCHNLLNALNSHKDRFVSGKEIKKKKCLFGLQ
VRAPPPLTSDSSPLIADPPINITHRRRSVPLSLPCQRRVGGPESRKSKRRIMETQVCPPP
VAANPIELLPCCQGYMGGASLYNSRKSEEELSLSSPPKRMYALYHTTYNGNSSLSRSLHH
YNSVEDTCRVPPPCYPYPLNSNGSLHHHPYQHQNNHQHNNQHQQNHQHDNHQHSLQHNHQ
HNHQHSHQHNNHQQNHQHSHQHNNHQQNHQHSHQQQPGQKQLESLILREMPPYQADNGGE
GGVSGGGGGAGGVVVGGADGTVSRSCGGGEAVRILARRVTPDGKVQYLVEWENVNLY
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggggggagtaagtgaaggagatgatgtgttggctcgatggagtgatggactactgtac
ctcggcaatgtgaaaagagtagatggagtcaagcaatgttgtctggtgagattcgaggac
aactcggagttctgggtactgagaaaggacattcactcgttcgctgctggagtggaagaa
gtttgctgtatttgtgacgctccgcctcttaaagaacccctcataaattgtcttaaatgt
cgccacggttatcatccagagtgccacacgccaaccatcgaaccggaagctgacagcgat
tcgtggatatgtcggcaatgtgtctttgcagtcgcaaccaagagaggcggggcgctcaaa
cggggacgctttgcccggctcatgcaatttatgaaactccggcttccctaccagctgtcg
tctttagactgggaccagcagcacctgaccaatcagcagcagtgctactgctactgtgcc
ggacctggagagtggaacctgaagatgttgcagtgtgcgagctgcggtcagtggttccac
gaggcctgcacacagtgtctgaccaagccgctgctgtatggagacaggttttatcagttc
cagtgctcagtatgtacaaagggaccagagaccattcaaagactacccatgacctggatg
gatttggctcatttagtgctctaccatctctcgctgtgctgcaagaggaaatactttgat
tttgaccatgaaatactgtccttcaccaatgagaattgggactccttgctcctaggcgcg
ctctctgacacgccaaggcaagaccgctgtcacaatctcctcaacgctctgaactcccac
aaggacaggtttgtctctggaaaggagataaagaagaagaagtgtcttttcgggcttcag
gtccgagccccgcctccgctgacgtctgattcgtcgcccctcatcgcggacccacctatc
aacatcacgcaccggagaaggtcggtcccgttgtcactaccctgccagaggagagtgggg
gggccggagtctcgtaaatcaaagcgtcgcatcatggagacacaggtttgtcccccccca
gttgctgccaaccccattgagctgctgccatgttgccagggatacatgggaggggccagc
ctttacaactccaggaagtcagaggaggagcttagtttaagctctcctcccaagcggatg
tatgccctctaccacaccacgtacaacggaaattcttcactctccaggagtcttcatcac
tacaacagcgtggaggacacctgcagagtaccaccaccttgctacccttaccccctcaac
tccaatggcagccttcaccaccacccctatcagcaccaaaacaaccaccaacacaacaac
caacaccaacaaaaccaccaacacgacaaccaccagcacagcctccaacacaaccatcaa
cataaccaccaacacagccaccaacacaacaaccaccaacaaaaccaccaacacagccac
caacacaacaaccaccaacaaaaccaccaacacagccaccagcagcagcccgggcagaag
cagctggagtccctcatcctacgtgaaatgcccccataccaggcggacaatggcggagag
ggtggtgtaagtggaggaggaggtggagcagggggggttgtagttggaggtgcagatggg
acagtgtccaggagctgcggaggaggggaggcagtgaggattttggcgagacgcgtcaca
ccagacgggaaggtgcagtacctcgtggagtgggagaacgtgaatctgtactga
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