Trematomus bernacchii (emerald rockcod): 117469501
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Entry
117469501 CDS
T09643
Symbol
siah2l
Name
(RefSeq) E3 ubiquitin-protein ligase Siah2
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117469501 (siah2l)
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117469501 (siah2l)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
117469501 (siah2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
117469501
NCBI-ProteinID:
XP_033969822
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MSRPSSEGAGGGKPGAVKHGGSGGPAASAAISVAAAAAASTGVSSLPGPGTSAAAPSFSL
TVGGLQSPELTALFECPVCFDYVLPPILQCQAGHLVCNACRQKLSCCPTCRGPLSPSIRN
LAMEKVASTLPFPCKFSSAGCLLSLHHSEKPEHEEVCEFRPYTCPCPGATCKWHGALEAV
MPHLMHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFSHHFMLVLEKQEKYEGHQQ
FFAVVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVSAAIMNSDCLVFDTSIA
HLFADNGNLGINVTISMC
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcccgtcctcagagggggcaggcggggggaaaccaggcgcggtgaagcacgga
ggatccggaggtcctgccgcgtctgccgctatatcggtagccgccgccgctgcagcgtca
accggcgttagctctcttcctggaccggggacctccgccgcggctccttctttctccctc
accgtgggcggtctccagtccccggagctcacggccctgtttgagtgcccggtgtgcttc
gactacgtgctgccgcccattcttcagtgccaggcgggccacttggtgtgtaacgcgtgc
cgccagaagctgagctgctgcccgacgtgccgcggcccgctcagccccagcatccggaac
ctggcaatggagaaggtggcgtccactctgcccttcccctgcaagttctcgtcggccggc
tgcctgctctctctgcaccacagcgagaagcctgagcacgaggaggtgtgtgagttcaga
ccgtacacctgtccctgtcctggagccacctgcaagtggcatggagctctggaggctgtg
atgcctcacctgatgcacgcccacaagtctattactacactgcagggcgaggacatcgtg
ttcctggcgacggacatcaacctgccgggcgcggtggactgggtgatgatgcagtcgtgc
ttcagccaccacttcatgctggtcctggagaagcaggagaagtacgagggccaccagcag
ttcttcgccgtcgttctcctcatcggaaccagaaaacaggcggaaaacttcgcctaccgc
ctggagctcaacgggaaccggcggagactcacctgggaagcgacaccgcgttcgattcac
gacggagtttctgcggcaattatgaacagcgactgcttggttttcgacacgtctatcgct
cacctgttcgccgacaacgggaacctgggcatcaatgtcaccatctccatgtgctga
DBGET
integrated database retrieval system
