KEGG   Trematomus bernacchii (emerald rockcod): 117470172
Entry
117470172         CDS       T09643                                 
Symbol
brwd1
Name
(RefSeq) bromodomain and WD repeat-containing protein 3 isoform X1
  KO
K11798  bromodomain and WD repeat domain containing protein 1/3
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tben04121]
    117470172 (brwd1)
Ubiquitin system [BR:tben04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     117470172 (brwd1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Bromodomain WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML Beta-prop_EML_2 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_SCAP NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_RIG_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 117470172
NCBI-ProteinID: XP_033970658
LinkDB
Position
Unknown
AA seq 2228 aa
MAKHRNISLLESELYYLISRFLTTGPCRRAAEVLASELEEHQLLPGRLDWLGNEHPRTYE
DVVAANRHIAPNHLLQICKQIGPILDKDVPSCVPGVHSLLGSGKQSMLRTAKDCDSVRFK
ASSYAALHRGRPPERPFNCKKPPHLVEIHRGRELTGVQRFSSINPVSNYERMRLHRRILG
HLSAVYCIAFDRTGLRIFTGSDDCLVKIWSSFDGRLHSTLRGHSAEITDLAVNYENTLIA
AGSCDKTIRVWCLRTCAPVAVLQGHSGSITSLQFSPFAKGSKRYMLSTGTDATVCFWQWD
VNNINFSDRPHKFTERPRPGVQTVCSSFSPGGMFLVTGSTDDVIRIYYLGGGSPEKISEL
HEHTDKVDSIQFCHSGERFVSGSRDGTARIWKLHLRQQWRSLLLNMAATLPGVEPMSEEE
SHFKPKVTMVAWDRHDNTVITAVNNHLLKVWNSYTGQLLHILKGHEAEVFVLEPHPFDPR
IILSAGHDGNVFIWDLLRGTNTQHYFNMIEGQGHGAVFDCKFTPDGHRFACTDSHGHLLI
FGFGSSKPYEKLPDQVFFHTDYRPLIRDTNGFVLDEQTQQAPHLMPPPFLVDVDGNPHPP
KYQRLVPGRENIAAEHLVPQLGYVATSDGEVVEQVISQQTSEHDEAAIRRSNLLDEAIRN
LQLQQDQQGQPGEGEAAPGAAAAPEGQAEAQGLFLVPAPSTPRRGITSVNERADVQSPPN
VGLRRSGQVEGVRQMHQNAPRSQMATERDLQAWRRRVVVPEVAPSSYREQENFRTARGDE
EMSLYNAKKRRIIYSSCRDDSDEDETARRAHGVLEFMDLSCEEGEETASSEVHSEEGELD
GSEMDSSNDEEEWKSDSSSHTSSEYSDWTADAGINLQPSTPLSSRKRARRRISSSEEEEE
EENEEEEEKEKQQQQSDEEERAGKKSKGKSKKAKNKTPRRPKVRPSINREVSNEFRPSPW
ITDVIPRKSPFVPQMGDEVIYFRQGHEAYVETVSRGDLYPINSDKQPWKKMELRDQEFVK
ITGIKYEVSPPTLCCLKLTLIDNGTGKISDKSFSVKYHDMPDVIDFLVVRQTYDEALRRN
WQPNDRFRSVIDDAWWFGMIVCQEPYQSEYPDSLFQCFKVRWDNGETEKLSPWDVEPIQD
DAPQPELEGGGIPVTEEEMRELMYKPLHGEWGERSRDAECERIIVAIDQLITVEIAAPFS
GPVDLIQYPTYCTVIAYPTDLGTIRLRLLNRFYRRLSALVWDARYIAHNARTFNEPMSKI
AHSAKIITNVLQKFVNNPSCIDIMEIYNAVEEMDDEDEEEDAEAPGTSSGHRLRQRSVEV
VPDRDAWKKKCKNLLNYIFECEDSEPFRQPVNPQNYPDYLNIIDTPMDFSTVRRTLGEDR
YENPTELCKDIRLIFANAKAYTPNKRSKIYSMTLRLLAFFEEQIRAITSEYKTAIKSSDR
LRRSQRCRKKMQPNDQSTSSQKRAAAKTQEKVESTSVTKSTSAKVGVPDRARRSRRRSSS
DDSKGASSTPESDSESEPSESEEEKRPGSSRHHRLRHKARVTRSNRAKQRKKESDSEEEE
EEEEEEEEEDSGAGEDGHMSSQSSGRRYPSRSKSSRSTRLTRNSSGAERRRTEGRAEVNG
HSSRASRSARRHHRDFDGASSPGSDGGEGVTLRRSLKRKTARAAVNKMKLLKVSEEEEEE
EEEEEETPRRSSSRLRLTIRTSKRAAVIQSSSDSDEKPSRRASQKKKESGDESEEEEEEE
EEDQDSDASSFSPNEQNGDTRSRKQRTSRQAAKAKGNDALTQVNGHGAKPHSNSEQEEAA
EESSGDEEESVSRKSSRSKATTSAKTKKKIESEEEEEEEDEEEDDDKEDDEEEEVEHTEH
RTTRHKLPISSDEEYKDHSSQKHPHQNGRNVEEAIHKDSKKKCKVSPDKQKPASTNKPDG
AESEELSDPPKRASLRKKSLKRDEESHHSSEESESNSKRSTRNKTKSKRPRSETSASESS
QQEYKPKRKSRRKRSTGSSDEESDNSDNVSNRRRKLRALPKKSYISDNSEEDSASGAKQG
SGKKTASREGKRESNRSSPNGARSRTSSSKKRIYTSDSEDAEEDGEDKPVSKSDKNSRSS
KRSKGESKGEGDTSSHSESSKEEEEEDVGSRKKNARQPKLKLKDGTRSSDSSSAAENSSA
SSGFRSSPKRRSHRRSGVAEKTSGRPLRPRRRASASEDSDETRRKTQQKACVNTRNRGKR
TVSYHDSE
NT seq 6687 nt   +upstreamnt  +downstreamnt
atggccaaacatcggaacatttcgctccttgagtcggagctctattacctgatttctcgt
ttcctaacaacgggtccatgtcggagagcagctgaggtcctggcgagtgaactggaggaa
catcagctattacccggtagattggactggcttggaaacgagcacccgagaacatacgaa
gacgtggttgcagcaaacagacatattgcaccaaaccatttgctacaaatatgcaagcag
atcggaccaattcttgacaaagatgtgccatcatgtgtcccaggagttcactccctcctg
gggtccgggaagcagtcaatgctcaggacggcaaaagactgcgacagtgtgcggttcaaa
gcttcatcatatgcagcccttcaccggggcagaccaccagagaggcctttcaactgcaaa
aaacctccacacctcgtggagatccatcgaggcagagagctgacaggagtgcagcgcttc
agctccatcaaccccgtcagcaactatgagcgcatgcggctgcaccggcggatcctgggc
catctgtctgcagtgtactgtatcgccttcgatcgcaccggtctcaggatcttcacaggc
tcagacgactgtttggtgaagatttggtcttcgttcgatggaaggcttcattccacgctg
cgaggacactccgcagagatcacagacctggcggttaattatgagaacacgctcatcgcc
gcaggaagctgtgacaagaccatccgtgtgtggtgccttcgtacctgtgcccccgtggct
gtgctgcaggggcacagcggatccattacctccctacagttctcaccgtttgctaagggc
tcaaagcgctacatgctctccactggaactgatgctaccgtctgcttctggcagtgggac
gtcaacaacatcaactttagcgatcggccacacaagtttacagagcgtccgaggccagga
gtccagacggtgtgctcctcattcagcccgggtgggatgttcttagtaacaggaagtact
gacgatgtcatccgaatatactaccttggaggcgggagtccagagaagatatccgagctg
cacgagcacacggacaaagttgatagcatccaattttgccactcaggggaaaggtttgtg
agtgggagtcgagatggaaccgcccggatctggaagctccacctgcggcagcagtggagg
agcctcctgctcaacatggccgccactctgccgggcgttgaaccaatgagtgaagaggag
agccacttcaaacccaaagtcaccatggtagcgtgggaccgccacgacaacacagtcatt
acggccgttaacaaccatctcctcaaagtgtggaactcctacacaggacagctgctacat
atccttaaaggccacgaggccgaggtgttcgtcctggagccgcacccgttcgaccctcgg
atcatcctgtctgccggccacgacgggaacgtcttcatatgggatctgctgcgaggaacc
aacacacagcactacttcaacatgattgagggccagggacatggggccgtttttgactgc
aagttcaccccagatggtcatcgcttcgcctgcacggactctcatggccatctgctcatc
tttggtttcggcagctccaagccgtatgaaaagcttccagaccaggtgttcttccacaca
gactaccggccgctgatccgggacaccaacggcttcgtgctggacgagcagacgcagcag
gccccccatctcatgcccccacccttcctggtggacgtggacggaaacccccatccacca
aagtaccagcgtctcgtcccaggccgggagaacattgctgcagaacacctggttcctcag
ctgggatacgtcgccaccagtgacggcgaggtggtggagcaggtgatcagccagcagacc
tcagagcacgacgaggctgcgatcagacgcagcaacctgttggacgaggccatccgaaac
ctgcagctccagcaggaccagcagggccagcccggggagggggaggccgctccgggggcc
gcagcagcaccggaggggcaagctgaggctcagggactattcttggtaccggcaccaagc
accccacgcagaggtataacgtctgtgaatgaacgagcggacgtgcagtcgccccccaac
gtgggtctgcgccgcagcgggcaggtggagggggtccggcagatgcaccagaacgcccct
cgcagccagatggccacagagagggacctgcaggcctggaggcgcagggtggtggtgccg
gaggtggcgcccagcagctacagggagcaggagaactttcgaacagccagaggagatgag
gagatgtctctgtacaacgccaagaagagacgcattatctacagcagctgtcgagacgac
tcggacgaggatgaaactgcgaggcgagcacacggagtgctggagttcatggacctgtcc
tgtgaggagggggaggagacggccagttcagaggtacacagcgaggagggcgagttggat
ggcagtgaaatggattcatccaatgatgaggaagagtggaaaagtgacagctcaagccac
acgtccagcgagtactctgactggacggcggacgctggtatcaacctgcagccctccacc
ccgttatcatcgcggaaacgagcgcggcgcaggatcagcagctctgaagaggaagaggag
gaggagaacgaggaagaggaggagaaggagaagcaacagcagcagagcgacgaggaggaa
agagctggcaagaaaagcaaagggaaatccaagaaagcaaagaacaagacgcccagacgt
ccaaaggtcagaccatccatcaacagagaagtgtccaacgagttcagaccgtcaccgtgg
atcaccgacgtcattcccaggaagtctccttttgttccccaaatgggcgatgaggtgatc
tacttccggcagggacacgaggcctacgttgagacggtgagccgcggcgacctgtacccc
atcaactcagacaaacagccctggaagaaaatggagctgcgggaccaagagtttgtgaag
atcactgggatcaaatatgaagtgtctcctcccacgctctgctgtctgaagctgacgctc
atcgacaacggcaccggaaaaatatcagacaagtccttttctgtcaagtatcacgacatg
ccggacgtgatcgatttcctcgtggtgaggcagacttatgacgaggcgctccggagaaac
tggcaaccgaacgacaggttccgctcagtgatagacgacgcctggtggtttgggatgatc
gtctgtcaggagccataccagtccgaataccccgacagcctcttccagtgcttcaaagtc
agatgggacaacggggaaaccgagaagctgagtccttgggatgtggaaccgattcaagat
gatgccccgcagccggagctggagggaggcgggatccccgtgacggaggaggagatgagg
gagctgatgtacaagcctctgcacggggagtggggggagaggagccgggacgccgagtgt
gaacgcatcatcgtcgccatcgaccagctcatcactgttgagatcgcagctcctttctct
ggccctgtggacttaatccagtaccccacctactgcactgtgatcgcctatcccaccgac
ctgggcaccatccggctgcgtctcctcaacagattctacaggcgtctctcagcattagtt
tgggatgccaggtatattgcacacaacgcccgaactttcaatgagccaatgagcaagatc
gcccactctgcaaagatcattactaacgtcctccagaaatttgtcaataatccgagctgc
atagatatcatggagatttacaatgctgtggaggagatggatgatgaggatgaggaagag
gatgcagaagctccaggaacctcctccggacacagactgcgacagcgctctgtagaggtg
gtgccggacagagacgcctggaagaagaagtgcaagaatctcctcaactacatatttgag
tgtgaggactcggagcccttcagacagcctgtgaatcctcagaactacccagactacctg
aacatcattgacacccccatggacttcagcaccgtgaggaggacactgggggaggaccgc
tatgaaaaccctacagagctgtgcaaagacataaggctgatcttcgccaacgctaaagct
tacactcccaacaaacgctccaagatttacagtatgaccctgcggctcttggccttcttc
gaggagcagatcagagcgatcacatccgagtacaaaacggccatcaagagcagcgacaga
ctccgccgcagtcagcgctgccgcaagaaaatgcagccgaacgatcagtccacgtccagt
caaaagagagctgcagctaaaactcaggaaaaagtggagtccacgtcagtgaccaaatct
acctcagccaaagtgggtgttccagatcgagccaggaggagtcgcaggagaagctcctcc
gacgactccaaaggtgcttcatcaacaccagagtctgacagtgagagcgagccgagtgag
tcggaggaggagaaacgtcctggctcctcgaggcaccatcgactcagacacaaagccaga
gttacgagaagcaaccgcgctaagcagaggaaaaaagagagcgatagtgaagaggaggag
gaggaagaggaggaggaggaggaggaggacagtggtgctggagaggatggacatatgtcc
tctcagtcttcaggtcgtcgctacccgagcaggagtaagagcagcaggagcacacggctg
accaggaacagctctggagcggagaggaggcgcacagagggcagagcagaggtgaacggt
cacagcagccgagcgtctcgcagtgcaaggcgccaccaccgggactttgacggagcctcg
tccccgggctccgacgggggggagggggtcacgctgcgcaggtcgctcaagaggaagacg
gcgagggcagcggtgaacaagatgaaactcctcaaagtgtcggaggaggaggaggaagag
gaagaggaagaggaggagacgccgaggaggagcagcagccgcctccgcctcacaatccgg
accagcaagcgcgccgcggtgatccagagcagctccgactctgatgaaaagccttcgaga
cgggcttctcaaaagaaaaaggaatcgggtgacgaatccgaggaggaggaggaggaggag
gaagaagaccaagacagcgatgcttcatccttctccccaaatgagcagaatggagacacg
aggtcccgcaaacagaggacgtcaagacaagctgctaaggcgaagggaaatgatgctctg
acccaagtgaacggacacggtgcgaaacctcacagcaactctgagcaagaggaggctgca
gaggagagctctggagacgaggaagagtcggtgtctcggaaatcctctagaagcaaagca
accacttccgccaagacgaagaagaagattgaaagcgaggaggaggaggaggaggaagat
gaagaggaggacgatgataaggaggacgatgaggaggaagaggtagagcacactgaacac
aggaccacaagacacaaacttcccatcagctcagacgaagagtacaaagaccacagttct
cagaaacacccacaccaaaacggaagaaacgtggaggaagccatccacaaggactctaag
aagaagtgcaaagtttcaccagacaaacaaaaacctgcctcaaccaacaaaccggacggt
gctgagtcagaggagctcagcgatcctccaaagagagccagcctgcgcaagaagagcctg
aagagagacgaagagagccatcactccagcgaggaatctgaatccaattccaagaggtcg
acgaggaacaagacgaagtccaaacggcctcgcagcgaaacctcggcctcggagagctcc
cagcaggaatacaaacccaagaggaagtcgaggaggaaacgctccaccggctcctcggac
gaagagtcggacaactcagacaacgtgtccaacagacggcggaagctccgagcactaccg
aagaagagttacatcagcgacaactcggaggaagactctgcttcaggcgcaaaacagggg
agcggtaaaaagacggcgtccagggaaggcaagcgagagtcgaacaggagctctcccaac
ggagccaggagtcggacgtcttccagcaaaaaacgcatttacacctcagactctgaagat
gctgaggaggacggagaagacaagccggtgtcaaagagcgataaaaacagcaggtcctcg
aaacgttccaaaggggagtccaaaggagagggggacacctcgtcacattctgaatccagc
aaggaggaggaagaggaggatgttgggagcaggaagaaaaacgccaggcagccaaaacta
aaactaaaagatggcactcgcagctccgactcgtcttcagccgccgaaaactcatctgcc
agctcagggtttcgcagcagtccaaagaggaggagtcacaggcggtcgggcgtcgctgag
aagacgtccggccgcccgctgaggccgcgccgccgtgcgtccgcctcagaggacagcgac
gagacgcgccgcaaaacacagcaaaaagcatgcgtgaacacccgcaaccgagggaagcgg
acggtgagctatcacgacagcgaatga

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