Trematomus bernacchii (emerald rockcod): 117470268
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Entry
117470268 CDS
T09643
Symbol
brwd3
Name
(RefSeq) bromodomain and WD repeat-containing protein 3
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117470268 (brwd3)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117470268 (brwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Bromodomain
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_DCAF12
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR11_1st
Beta-prop_VPS8
Auxin_resp
Motif
Other DBs
NCBI-GeneID:
117470268
NCBI-ProteinID:
XP_033970873
LinkDB
All DBs
Position
Unknown
AA seq
1826 aa
AA seq
DB search
MAGEQYSQTEAELYYLIARFLLSGPCKKAAKVLIEELEEYELIPERWSWHGEKYKRTFRD
WVTLNQHIPADYLLHVCRRIGPLIEKEIPPSVPGVQTLLGLGKQSLLRTTKSCSHKVCSG
SAVAALHRGRPPEPPVSIGNPPNVVSIMGARQATGRARFSQAVPSSSYQHMKIHKRILGH
LSSVYCVAFDRTGRRIFTGSDDCLVKIWATDDGRLLSTLRGHSAEICDMAVNHENTFIAS
ASCDKTIRVWCLRTCAPITVLQAHAASITSIQFCPAIKGTTRYLASTGADGMVCFWKWHS
LSMKFQDQPVKFVERSRPGVQVSTSSFSSGGMFMATGGTDHLIRVYYLGGETPVKVSEMD
AHTDKVVVVQFSNNSDSLRFVSGSRDGTAKIWHYQQQEWKSVTLDISARLPGSAVANGDD
KTKLVVTMVAWDRADSTVITAVSNYLLKVWSTTTGQLLHVLSGHDDELFVLEAHPFDSRI
MLSAGHDGNIYMWDLAKGTKIRNYFNMIEGQGHGAIFDCKFSTDGQHFACTDSHGHLLIF
GFGCSRRYEKIPDQMFFHTDYRPLIRDANNYVLDEQTQQAPHLMPSPFLVDIDGNPHPPH
YQRLVPGREQCQEDQLVPQLGYMANSEGELVEQVLGQQTAENRESILDNLIRQLQDEQDG
REIEEPPAEEAEEGNEAEGEASSVAGTPRRSGQVDGVWQMQHNVLLSQVATERDLLAWSR
RVMVNEVPHGISRSVEQCRKAKGDMECSLYNAERRKKPVSCTPMSDQPTSRLRSLRPSKK
KQQRHAYQTRSAQVRRPRRSRNSSNRLETESQVDSDSEGNAAEQAEQSEASSDGEAQWQN
ESSSGDSSSEYSDWTADAGINLQPPKRPTRRPVQPRGYSSSEEEEEEEEQEGDGKAKEPR
KKDNEKKKKPKETKQKPTSSLAGLDAEEWLPPAWIMETVPHRSPFVPQMGDELVYFKQGH
QAYVRAVRRAKAYSINPQKQPWNRLDLRDQESVKVVGIKYEVGPPTLCCLKLAFVDSVSG
KMTSESFSLKYHDMPDVIDFLVLQQFYNEAKDHNWQPGMRFRSIIDDAWWFGSVEDQEPL
QLEYPDSLFQCFAVKWDNGEREKMSPWDMEPIPEEAALPEQEGDGVEVAEDELKALLYSP
QEGEWGAHTRDEECERVIFGIDLLLTLDVAKAFSSPVNLQDYSLYCTAVSYPTDLSTIHK
RLENRYYRRISALMWEVRYIEHNARTFNEPQSPIVATAKVVTDILLRYIGDQSCTDILDL
YHKLRSEVSSGGEEAELEVDSDTPGTSTGNQGANQNSKKRGVVLDVKFWRGQCKELSRRM
MVSPDSEPFRRPVDLFEYPDYRNIIDTPMDLASVSETLGAGNYESPVEFAKDVRLIFSNS
KAYTPNKKSQIYTMTLSLSAFFEKNIISIISDYKSAVQNERRTRQRLSYRDRMHNGGSSP
PLSPSPSSKGKHKSGRVSKPKKSQTSTKTRSRRSSQAQQSSSVAEEEENEEEEEEEEDDI
QPASPESGTSGESGSQEPLRVTRSQATPVKKSGHRRNLHLSNGSRQRRGREVPQAAAAAD
DDDDDEDEEEEGEVVVVAAAVSGPNSSSSDSSSSSSSSSSSSSSDSDNSSESEMEKFVEG
GDHDYSKAPCLSLRLSVKGKGAASGKRRHKGGGDAAQGPKRARVQPPVEEEEEEDAGEEE
EEEEEVGGEDEEEEDGEVEDGEVEEEEEEEEQQPVAVQHVENEAEEDEEEEPEEEEEPEE
EEDPDGEEDEAQGGAAGASSLRGSRCKSRRVSTRNQGRRTVLYRDESEDDGHGSKEDPLN
LGRSRSGRVRKMTEKARVSHLMGWTH
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagaacagtattcacaaaccgaagctgaactttattacctcattgccaggttt
ctgctgtctggaccttgcaaaaaagcagcaaaggttctgatcgaggagctggaggagtat
gagttaatacctgaacgatggagttggcatggggagaaatacaaacggacctttcgagac
tgggtgactttaaaccagcacattcctgcagactatctgctccatgtttgtcggcggata
ggtccgcttatagagaaggagatcccacctagtgttcctggagtccaaacacttcttgga
cttggaaaacagtccttgcttcgtaccaccaaaagttgcagccacaaagtatgcagtggc
tcagctgtcgccgcactgcaccgaggacgtccaccagaacctccagtcagcattggcaac
cctcccaatgttgtgtccatcatgggcgctcgccaggccacaggcagagctcgtttcagc
caggccgttccgtcttcctcctatcaacacatgaagatacacaaacgtatccttggccac
ctgtcttcagtctactgtgtagcctttgaccgcaccggccgtcggatatttacgggttct
gatgactgcctggttaaaatctgggccacagatgacggccggctcctgtccacgctccgc
ggccactcggcagagatctgtgacatggccgtcaaccatgagaacaccttcatcgcctca
gccagctgtgacaaaaccatcagagtgtggtgcctgcgtacctgcgcacccatcacggtt
ctgcaggcccacgctgcctccatcacgtctatacagttttgtcctgccatcaaagggaca
acaaggtacctggcctccaccggtgcagacggcatggtgtgtttctggaagtggcactcg
ctcagcatgaaattccaggatcaaccagtcaagtttgttgagcgttcacgtccaggagta
caggtctccacttcctctttcagcagtggtggtatgttcatggcaaccggtggcactgat
catctgatcagagtctactaccttggtggggaaactcctgtgaaggtctctgagatggat
gcgcacacggataaagttgtagtcgtccaatttagcaataacagcgacagtctaaggttt
gtgagcggcagtcgtgacggcacagccaagatctggcattaccagcaacaggagtggaag
agtgtcactttagacattagtgccaggctccccgggagtgctgtcgccaatggcgatgat
aaaactaagctggtggtgaccatggtggcgtgggaccgtgcagacagcaccgtcatcaca
gcggtgtcaaactacctgctcaaagtgtggagcaccaccacgggacagctgctgcatgtc
ttatctggccatgacgatgagttgtttgtgctggaggctcatccatttgactcccgcatc
atgctgtctgctggccacgatggcaacatttacatgtgggacctcgccaaaggaaccaag
atccgtaactacttcaacatgattgaagggcaaggccacggtgctatttttgactgcaag
ttctccactgatggacagcattttgcctgcactgactcacacggccatttgctcatcttt
ggctttggctgcagcagacgatatgagaagattcctgatcagatgttcttccacacggac
taccgacctctcatccgtgatgctaataactacgttctggatgagcagacgcagcaggct
ccacacctcatgccttcacccttcctggtggacattgatgggaatcctcaccctcctcac
taccagcgcctggtgccagggagagagcagtgccaggaggaccagctggtaccccaacta
ggatacatggctaacagtgagggagagttggttgagcaggtacttggccagcaaacagca
gaaaacagagaaagcattttggacaatctgatcagacagttgcaggatgagcaggacggg
cgtgagatcgaagaaccgccggctgaagaagcggaggaaggaaacgaagcagagggggag
gcctcctctgtggctggtaccccccgcaggagtgggcaggtggacggggtgtggcagatg
cagcataacgtcctgctgagtcaggtggccaccgaaagggacctgctggcctggagccgc
agggtgatggtcaacgaggtgccgcatgggatctccagatctgtggagcagtgcagaaaa
gccaaaggcgacatggaatgttctctttacaacgcagagaggcggaagaagccagtgtcc
tgcacaccaatgagcgatcagccgacttctcgtctgcgatccctccggccgtccaagaaa
aagcagcagcgccacgcctatcagacccgctcggctcaagtccgtcgtcctcggaggagt
cgaaattccagcaaccgacttgaaactgagagccaggtggactctgacagcgaaggaaat
gcagcagagcaggcggagcaaagcgaagcgtcctctgatggtgaagctcagtggcagaac
gaaagcagctccggtgactcctccagtgagtattctgattggacagccgatgctgggatc
aacctgcagccgccgaagcgaccaaccaggaggcccgtacaaccccggggttacagcagc
tcggaggaggaggaagaggaggaggagcaggaaggagatggcaaggcaaaggagcccagg
aagaaggacaacgagaaaaagaagaagcctaaggagaccaaacagaaacccacgtcctct
ctggctggacttgatgcagaggagtggctgccaccagcatggataatggagaccgtccca
catcgctctccttttgttccacaaatgggagatgagctcgtctacttcaaacagggccac
caggcttatgtccgcgctgtccgcagggctaaggcttacagcatcaaccctcagaagcag
ccgtggaacagactcgacctcagggaccaagaatctgtgaaggtggttggaattaaatat
gaagttggacctcccaccctctgctgcctaaagctggctttcgtggactcagtctcaggg
aagatgaccagtgaatctttctccttaaagtaccatgacatgccagatgtcatagatttt
ctggtacttcagcagttttacaacgaagctaaagaccacaactggcaaccaggaatgagg
ttccgcagcatcattgacgacgcctggtggttcggctccgtggaggaccaggagcctctg
cagctggagtatccagacagcctgtttcagtgctttgcagtgaagtgggataatggtgag
cgggagaaaatgagtccctgggacatggagcctatccctgaagaagctgcgttgcctgag
caggagggtgatggcgtggaggtggcagaggacgagctgaaggctctgctctactctcct
caggaaggagagtggggcgctcacacgagagatgaagagtgtgagagggtcatctttggc
atcgacctgctcctcacactggatgtcgcaaaggcattctcatcacctgtaaatctgcaa
gactactctctgtactgcactgccgtttcttaccccactgacctcagcaccatccacaaa
cgactggagaaccgctactacaggcggatctctgcgttaatgtgggaggtgcgctacatc
gaacacaacgcccgcactttcaacgaaccccagagccccattgtagcaactgccaaggtg
gtgactgacattctcctgcgctacatcggggaccagagctgcacggacatcttggatctg
taccacaaactgaggtctgaggtcagcagtggaggagaagaggctgagttggaggtggac
tctgacactccgggcacctcaacaggaaatcagggagccaaccagaattccaagaagcgt
ggtgtggttttggatgtgaaattttggcgtgggcaatgcaaagagctgtcgcgtcgaatg
atggtgtcgccagactcagagccgttcaggcggcccgtggacctctttgagtatccggac
tatcggaacatcatcgacactcccatggatctggcttcagtgtcagagacgctgggcgca
gggaattatgaaagcccagtggagtttgccaaagatgtgcgcctcattttcagcaactcc
aaagcatacacgcccaacaagaaatcacagatctacaccatgaccctcagcttgtcggcc
ttctttgaaaaaaacataatctccatcatctccgactacaagtctgccgtacagaatgag
cggcggacccgtcagagactgagttacagggacaggatgcacaacggaggcagctccccg
cctttaagtccctcccccagctctaaagggaagcacaagtcagggagggtgtcgaagcca
aaaaaatcccagacctcaacgaagactcgttctcggagatcaagccaggcccagcaaagc
agtagcgtagcagaagaggaggagaatgaggaagaggaggaagaagaggaggacgacatc
cagcctgcttccccagaatcggggacgagtggcgagagcggaagccaagagccgctccgg
gtgacccgcagccaggcaactccagtgaagaagtcagggcacaggcgtaaccttcatctc
agcaacggctccagacaacgccgcggtcgagaagtgccacaggccgccgccgccgccgat
gatgatgatgatgatgaagatgaggaagaagagggggaggtggtagtagtagcagcagct
gtgtctgggcccaacagctcctcatcagattcatcctccagctcatcgtcctcctcttcc
tcgtcgtcgtcggacagcgacaacagctccgagtctgagatggagaagttcgtcgaaggc
ggagatcacgactacagcaaagccccctgcctgtcgctacgcctctctgttaagggtaag
ggggcggcatcagggaaaaggagacacaaagggggaggggacgcggcacagggacctaaa
agggcgcgagtgcagccaccagtagaagaggaagaggaggaggatgctggggaagaagaa
gaagaagaggaggaggtgggtggtgaagatgaagaggaggaggatggagaggtggaggat
ggagaggtggaagaagaagaagaggaggaggagcagcaaccggtggctgtacaacatgta
gagaatgaggcagaggaggatgaagaggaggagccagaggaagaggaggagccagaggag
gaggaggatcccgatggggaggaggacgaagcacagggaggggctgcgggagctagcagt
ctgaggggcagccggtgtaagtctcgccgggtgagcactcgtaaccagggccgcaggaca
gttctgtaccgggacgagtctgaggacgacggccacgggtccaaggaagaccccctcaac
ctaggccggtcccgctcagggagggtccgcaaaatgacggagaaagcccgcgtcagccac
ctcatgggctggactcactga
DBGET
integrated database retrieval system
