Trematomus bernacchii (emerald rockcod): 117471337
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Entry
117471337 CDS
T09643
Symbol
samd4a
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117471337 (samd4a)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117471337 (samd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_3
Motif
Other DBs
NCBI-GeneID:
117471337
NCBI-ProteinID:
XP_033972159
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MMFRDQVGVLASWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLAECTELQVLEA
EANNPGVISQWQGESKERVISLVLTHLPLLKPGNVEAKGEYMRLLPRILAHTIEHGRHLE
ESRQLLSYALIHPATSLEDRSALALWLNHLEERAAARGDSLERPPPSGPHHHHHQSTPPS
TLSSTGSSSSTNTSSSGNLYSLHHHQRYGSDDRLNGWQSSRDSGLGGGWHQQQQGCENGH
LLLYPSSSVPTTINTVGTGGGGTTVLTSGGGSQQHSPLKRSVSLTPPMSGPSNQPLGHVW
LSQEDLRSARGPAPDHAPLSPQSSIASSGSGGSEHLEEAGLGGSGLHRSSFHDEGSGMRD
VPAWLKSLRLHKYAALFSTMTYDEMMSLTEDQLEAQKVTKGARHKIVISILKLKDRQNLL
RSLEKDVLEGSNLRSPLQELHQMIMTPIKAFNGGEEASMQRALLSPESKSAAPGSHLTGV
GGGGGEAESSTSVIAEGDLPGQFTRVMGKVCTQLLVSRSDEDNISSYLQLIDKCLIHESF
TETQKKRLLSWKQQVQRLFRSIPRKTLLDIAGYRTQRSRFGQSNSLPTAGCVGGSVSARR
SLRQFQMPSRSLPGARLGLLGSSGLLGPTPRSSSSTPTGPKQGRQGLWFANPGGSNSMPS
RTHSSVQRTRSLPVHTSPQTMVMFQQSDLQLPVTEPDINNRLESLCLSMTEHALGDGADR
TSTI
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgcgatcaggtgggcgtgctagccagctggttcaaagggtggaatgagtgc
gagcagacagtggctctgctgtccctgctgaagagggtgagccggacccaggcccgcttc
ctgcagctctgtctggagcactccctcgccgagtgcactgaactgcaggtcctggaggca
gaggccaacaacccaggagtgattagccaatggcaaggagagtcgaaggagcgtgtcatc
tcgctcgtcctcacccacctcccgctgctcaaaccaggcaacgtcgaagccaagggcgag
tacatgcgcctgctgccacgcatcctggcccacaccatcgagcatggccgccacctggag
gagtcccgccagctcctgtcctacgccctcatccaccccgccacctccctggaggaccgc
tcagccctggcactgtggctcaaccacctggaggagagggccgctgcccggggagactca
ctggaaaggcctccaccttcgggaccacaccaccaccaccaccagtccacgcctccatcc
accctctcatcaacaggatcctcctcctccaccaacacctcttcatcaggcaacctctac
tccttgcatcaccaccagcgctacggctcggacgaccgcctcaacggctggcagagctcc
agggattcagggctgggcggaggctggcatcagcagcagcagggctgtgagaacgggcac
ctccttctctacccatcatcctctgtgcccacaaccatcaacacagttggaactggtgga
ggtggtaccactgtcctgacgagtggaggtggcagccagcagcacagtcccctgaagcgc
tccgtgtccctcacccctcccatgagcggccccagcaaccagcctctgggtcacgtctgg
ctgtcccaagaggacctacgttctgccagaggccccgccccagaccacgcacctctctcc
ccccagagcagcatcgcctcctctggcagtgggggcagtgagcatctggaggaggctggt
ttaggaggttcaggtctgcatcgcagttccttccacgatgagggcagcggcatgagggat
gttcctgcgtggctgaagagtctccgtctccataagtacgccgctctcttctccacaatg
acctacgatgagatgatgtcactgaccgaagaccaacttgaggcacagaaggtcactaaa
ggagcaagacacaagattgttatcagcattctgaagctcaaagacagacagaatctactt
cgcagcttggaaaaggatgtgttggagggcagtaatctgcgctcgcccctacaggagctc
catcagatgatcatgacgcctatcaaggctttcaatggtggcgaggaggcctctatgcag
cgggccctgctgagccctgaaagcaagagcgcagcgccgggctcccacctgacgggggtc
gggggaggcggaggggaggctgagtcgagcacaagcgtcatcgctgagggggatctaccc
ggccagttcacccgtgtcatgggcaaagtttgtacccaactactggtgtcgaggtcagac
gaggacaacatcagctcctacctacaactcatcgacaagtgccttatacatgagtccttc
actgagacgcagaagaagaggctgttgtcatggaaacaacaggtccagaggctgttccgg
tccattccaaggaaaactctcctcgacatcgcagggtaccgaacgcagaggagccgattc
ggccagtctaactctctccccaccgctggctgtgttgggggcagcgtgtcggcccggagg
agcctccgtcagttccagatgccctccaggagcttgccgggtgccaggctgggcctgctg
ggcagcagtgggctgctgggacccacaccccgcagctccagcagcacacccaccggtccc
aagcagggcagacagggtctgtggttcgccaaccccgggggaagcaacagcatgccgagc
cggacccacagctccgtgcagaggacgcgctcgctgcccgttcacacctccccacaaacc
atggtcatgttccaacaatccgatcttcagcttccagtgacagagccagacatcaacaat
cgccttgagtctctgtgtctgagcatgacagagcacgccttgggagacggtgctgaccgt
acatcaacgatatga
DBGET
integrated database retrieval system
