KEGG   Trematomus bernacchii (emerald rockcod): 117471834
Entry
117471834         CDS       T09643                                 
Name
(RefSeq) tubulin alpha-1B chain-like
  KO
K07374  tubulin alpha
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04145  Phagosome
tben04210  Apoptosis
tben04517  IgSF CAM signaling
tben04530  Tight junction
tben04540  Gap junction
tben04814  Motor proteins
tben05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:tben00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    117471834
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117471834
  09143 Cell growth and death
   04210 Apoptosis
    117471834
  09144 Cellular community - eukaryotes
   04530 Tight junction
    117471834
   04540 Gap junction
    117471834
  09142 Cell motility
   04814 Motor proteins
    117471834
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117471834
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tben03019]
    117471834
   03036 Chromosome and associated proteins [BR:tben03036]
    117471834
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tben04812]
    117471834
   04147 Exosome [BR:tben04147]
    117471834
Messenger RNA biogenesis [BR:tben03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117471834
Chromosome and associated proteins [BR:tben03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     117471834
Cytoskeleton proteins [BR:tben04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    117471834
Exosome [BR:tben04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117471834
  Exosomal proteins of other body fluids (saliva and urine)
   117471834
  Exosomal proteins of colorectal cancer cells
   117471834
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 117471834
NCBI-ProteinID: XP_033972965
LinkDB
Position
Unknown
AA seq 452 aa
MRECLSIHVGQAGVQIGNSCWELYCLEHGIQPDGRKPGDQNISGGGGDDSLSTFFMETGA
GKHVPRAVFVDLEPTVIDEVRKGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEVIDLV
MDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQVS
TAVVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICCKKLDIERPSYTNLNRLMSQIVSSI
TASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNSCFEP
ANQLVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKSKRSIQFVDWCPTGFKVGINYQ
PPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEF
SEAREDMAALEKDYEEVGADSLEDEDEEGEEY
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgcgcgagtgcctctcaatccacgttggtcaggctggtgtgcagattggcaattcctgc
tgggagctttactgcctggaacatgggatccagccggacggcaggaagcctggtgaccag
aacatctcaggaggaggaggggacgattccttaagcaccttcttcatggagactggagct
ggaaagcacgtccccagagcagtgtttgttgacctggagcccactgtcatcgatgaggtg
cgcaaggggacttaccgccagctgtttcaccctgagcagctgatcactggcaaggaggat
gctgccaacaactacgcccgaggacactacaccatcggcaaggaggtcatcgacctggtg
atggacagaatccgaaagctgtccgaccagtgcaccggtcttcagggtttcctggtgttc
cacagcttcggagggggcaccggctctggtttcacctccctgctgatggagcgtctgtcc
gtcgactacggcaagaagtccaaactggagttctccgtctacccagctccccaggtgtcc
accgctgtggtggagccctacaacgccatcctcaccacccacaccaccctggagcactct
gactgtgccttcatggttgataatgaggccatttatgatatctgctgtaaaaagctggat
atcgagcgtccctcttacacaaacctgaacaggttaatgagtcaaattgtgtcctccatc
actgcctcccttcgttttgatggtgccctcaatgttgatctgacagagttccagaccaac
ttggtgccctacccccgtatccacttccctctggccacctatgcccctgttatttctgca
gagaaagcttaccatgagcagctctcagtggcagaaatcactaattcctgcttcgagcca
gccaatcagttggtgaaatgcgacccacgccacggtaaatacatggcctgctgccttttg
tatcgtggtgatgtcgttcccaaagatgtgaacgctgccattgccaccatcaaaagcaag
cgctccatccagtttgtggactggtgccccactggtttcaaggtgggcatcaactaccag
ccgcccactgtagttcctggtggagacctggccaaggtccagagggctgtgtgcatgctg
agcaacaccactgctattgcagaggcctgggctcggctggaccacaagtttgatctgatg
tacgctaagcgtgcctttgtgcactggtatgtgggtgagggtatggaggagggagagttc
tctgaggccagagaggacatggccgctctggagaaagattacgaggaggttggagctgat
agcctggaagatgaggatgaggaaggagaggagtattag

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