Trematomus bernacchii (emerald rockcod): 117474105
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Entry
117474105 CDS
T09643
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tben04054
]
117474105
Pattern recognition receptors [BR:
tben04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117474105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
PRY
LRR_6
NOD2_WH
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
117474105
NCBI-ProteinID:
XP_033976029
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MEQMSVAHETDDGPQEILHSNKEVVYHFQPNCTAQSGGNVVAPSITGSTITNLNFIITST
GQGSIVSSKEASNHDTADLSDDLKPQTFPPLEDKITECQEQLKAKLKRKFGYLLQGMMTD
ANRTPLNKIYTELYITEGRNGEVNKEHEVIQFEMASRKHAAQEKSIHCNQLFVPLRDHPI
RTVITRGVAGIGKTVSTNKFTLDWAEGEANTNLGFVFPLSFRELNPMKKQSFSLVELLSV
FFPETNETGIFTNANNKMLFILDGLDESRLSLDFHNTEIVSDVTQKTNIDVLLINLIRGG
LLPFALVWITSRPVASSQIPMESVDLVTEVRGFNEPQKDEYFRRKICDQNLANRVIAHVK
SNRSLYIMCHIPIFCWMAASVLEKKLQTTASKDTPKSLTQMYIHFLFLYVEDIKKRLPEK
TESNAKCMRDMFMSLGKLAFQQLEKGHLIFYESDLNSDGINVSQASMFSGVYTQIFNEQL
TLCEEKTFCFVHLSIQEFFAALYVYLKFHNDNENVLVKKPSASRRLLFKGPSEVILYKEA
VEKASRSDEGHFDIFLRFLLGLSLESNQTLLKHLMTTNRSKPSTRKEIITHIKQRIKESP
SPDRCLNLFHCLNELHDHSLIEEIQSYLSPGSLNKAKLSPAQWATLVFVLLTSEKELRVF
ELRNYTKSEEGLLRLLPVMKKASVANLNACNLTAACCKILEIGIHSSEIRELDLGNNNIT
DDGILVLSDTLKNSKLEKLRLKSCNLTERSASVWASVISSDANQLKELDLSHNDLMDVGV
KELSVGLGSPHCKLEILMLAWCSVTEEGCTFLASALNFSRLKELDLSYNHPGPLGLQLLS
ALKEDPRCSLHELSVEQCGESRIQPGPMKYTKELTLDPNTAHRDLSLSEGNRKATRWTKQ
SYPDHPERFDFWTQVLCREGLTGHCYWETEWTGRAFIGVAYRTVCRKGEGHECWLGKNDS
SWGLFCTKERYQIWPAHMQVDLTLPPSYNSNSNKVGVYLDWSAGRLTFFRISCGAMTLIH
NFYTTFTEPVYPGFWLGWVDSTVYL
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaatgagtgttgctcatgaaacagacgatgggcctcaagagatacttcactct
aataaggaagtggtttatcatttccaacccaactgcaccgctcagagtggaggcaatgtg
gttgctccctccatcactggttctaccatcaccaatctgaacttcattatcacctcaacg
ggccaaggatctattgtttcatcaaaagaagcatcgaaccatgacactgcagacctcagt
gatgatctgaagccccaaacatttcctcctttagaagacaagatcacagaatgtcaagag
caattgaaagctaagctgaagaggaagtttggctacttgctgcaggggatgatgactgat
gcaaacaggacacctctcaataagatctacacagagctctacatcactgagggaagaaat
ggtgaagtcaataaagagcatgaggtgatacagtttgaaatggcctccaggaaacatgcg
gcccaggagaaatcaattcactgcaatcagctctttgttcctctacgagaccaccccata
agaactgtgatcacaaggggagtcgctggcatcggaaagaccgtatctaccaataagttc
acactagactgggctgagggggaagcaaacaccaacctgggatttgtatttcctctgtct
ttccgagagctgaatcccatgaagaaacaaagcttcagtctagtcgaacttctcagtgtc
tttttcccggaaactaatgagacaggaatcttcacgaatgccaataacaaaatgctcttc
atcctggatggtctggacgagagccgcctgtctttggacttccacaacactgaaatagtg
tctgatgtgacgcagaagaccaacattgatgtgcttctgatcaacctcattcggggagga
ctccttccctttgctctcgtttggataacatctcgcccggtagcctccagtcagatcccc
atggaatctgttgatctagtgacagaggtgcgagggttcaacgaaccccagaaagacgag
tacttcaggaggaaaatctgcgaccaaaacctagcaaacagagtgatcgcgcatgtgaaa
tccaacagaagtctctacatcatgtgccacataccaatcttctgctggatggcggcgagt
gttcttgagaagaagttgcagacgactgcgagtaaagacacgccaaagagtcttactcag
atgtacatacacttcttgttcttgtacgtggaggacatcaagaaaaggttgcctgaaaaa
acagagtcaaatgcaaaatgcatgagagatatgttcatgtcgctgggtaaactggccttc
cagcaactcgagaagggccacttgatcttctatgagagcgacctcaactcggacggtatt
aatgtctcccaggcgtccatgttctcaggagtctacacacaaatcttcaatgagcagctg
acactgtgcgaggagaaaacgttctgctttgtgcatctgagcatccaggaattctttgct
gcgttgtatgtctacctcaagttccacaacgacaacgaaaacgtcttggtaaagaagccg
tccgcgtcaagacgcttgctgttcaaaggaccatcagaggtcatcctatacaaagaagcg
gtagaaaaagcttcgcggagtgatgaaggacattttgacatctttctgcgcttccttctg
ggcctgtctctggaatccaatcagactctgttgaagcacctgatgaccaccaacagatca
aaaccaagtaccaggaaggagatcataacacacataaaacagaggatcaaagaaagccca
tccccagacagatgcctcaatctctttcactgtctgaacgagctgcatgaccactccctc
attgaggagattcagagctacctcagcccaggcagtctcaacaaagccaaactttctcct
gcgcagtgggccactctggtctttgttctactgacatcagaaaaggagctgcgggtgttc
gaactgaggaactacaccaagtcagaggaaggtctcctgaggctgctgcctgtcatgaaa
aaagccagtgtggcaaatctaaatgcatgcaatcttactgctgcttgttgtaaaatcctg
gagattggcatccactcatccgaaatcagagagctggacctaggcaacaacaacatcaca
gatgatggaatattagtgctttctgatacattgaagaacagcaaacttgagaaactcaga
ctgaagagctgcaacctaacagaacgcagcgccagcgtttgggcctctgtgatcagctca
gacgccaaccagctgaaagaactggacctctctcacaatgacctcatggacgttggagtc
aaagagctctctgtagggctggggagtcctcactgtaaactggaaatactcatgttggcc
tggtgcagcgtgacagaggaaggctgcacttttctggcatctgctttgaacttttcccgt
ctcaaagagctcgacctgagctacaaccacccgggacccttgggcctgcagctgctgtct
gcgctgaaggaggaccctcgctgcagcctgcatgaactcagtgtggaacagtgtggtgaa
tccaggattcagccaggtccaatgaaatacaccaaggaactcaccctagacccgaacaca
gcacacagagacctctctctctccgagggaaacaggaaagccacgcgttggaccaagcag
tcgtatcctgatcatcccgagaggtttgacttctggacccaggtgctgtgcagggagggg
ctgacggggcactgctactgggagaccgagtggacagggagagccttcataggagtcgcc
tacagaaccgtgtgcaggaagggagaaggtcacgaatgctggttaggcaaaaacgactct
tcctggggacttttctgcaccaaagagcgctaccagatctggcccgcacacatgcaggtt
gatttaaccctcccacccagctacaattccaactccaacaaagtgggagtctatctggac
tggtctgcagggagactgactttcttcaggatctcctgtggtgcaatgaccctcatccac
aacttctacaccaccttcactgagcctgtgtacccggggttctggctgggctgggtggac
tccacagtgtacttgtga
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integrated database retrieval system
