Trematomus bernacchii (emerald rockcod): 117478836
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Entry
117478836 CDS
T09643
Name
(RefSeq) LIM homeobox transcription factor 1-beta-like
KO
K09371
LIM homeobox transcription factor 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117478836
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
117478836
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117478836
NCBI-ProteinID:
XP_033981639
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MLHDIKVEADPGSVDLLTGGASPQQAVCEGCSRIISDRFLMRVNDTSWHERCLQCAACQQ
PLTNTCYSRDTRLYCRADYQQLFSSKCSGCLESISPSAFVMRALDSVFHLSCFCCCVCER
QLSKGDEFVLRDNQLLCKDDYERERLITVSPHTSDSDKSEDEDLNVPSECRSAGKRRDDK
DPRRPKRPRTVLNTVQRRAFKASFDVSSKPCRKVRETLAAETGLTVRVVQVWFQNQRAKM
KKLARRQQQQNEQHNSQRVGQDGMSMEGLLSSYSGHLPLTQQLGMDPSRYSEPFQQGLTP
PQMPGDHMNPYGTDSIFHDFDSDTSLTSLSDCFMAAPDVGSLQSRAGNPIDRLYSMQNSY
FASCGPDITAGTTQSTTTHPRS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacgacattaaagtggaagctgacccgggatccgtggacctcctgaccggcgga
gcttccccgcagcaggccgtgtgtgagggctgctcgcggatcatctcagaccgcttcctg
atgcgggtcaacgacacgtcctggcacgagcgctgcctgcagtgcgccgcgtgccagcag
ccgctcaccaacacctgctactccagagacacgaggctgtactgcagggccgactaccag
cagttgttttccagtaagtgcagcggttgtctggagagcatttctccctcagcgttcgtg
atgcgagctctggacagcgttttccacctcagctgcttctgctgctgcgtctgtgagcgt
cagctgagcaaaggagacgagtttgtcctgagagacaatcagctgctgtgcaaagacgac
tacgagagagagcgtctcattacagtcagtccacacacctcggactcagataagagtgag
gatgaggatctgaatgtaccctcagagtgtcgttcagcagggaaacgcagagatgacaaa
gaccctcgtcggcccaaacgtccgcgcaccgtcctcaacaccgtgcagaggagagcgttc
aaagcctccttcgatgtgtcctccaaaccctgcaggaaggtgagagagaccctggctgca
gagacaggactcactgtccgtgtggtccaggtctggttccagaaccagagagcaaagatg
aagaagttagcccgcagacaacagcagcaaaacgagcaacacaacagccagagggtaggc
caagatgggatgtcgatggagggtctgctcagctcgtattcaggacatctccctctcacc
cagcagctggggatggatcccagcagatactctgaacccttccagcagggcctcacaccg
cctcagatgcctggtgaccacatgaacccctacggcactgactccatcttccatgacttt
gacagtgacacttctctcacgagtctaagcgactgtttcatggccgctccagatgtcggc
tccttgcagagtcgggcgggaaaccccatcgaccgtctgtactccatgcagaactcctac
tttgcctcatgtggccccgacatcaccgctggcaccactcaatccacaacgacacatccc
aggtcatga
DBGET
integrated database retrieval system
