Trematomus bernacchii (emerald rockcod): 117479478
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Entry
117479478 CDS
T09643
Symbol
aaas
Name
(RefSeq) LOW QUALITY PROTEIN: aladin
KO
K14320
aladin
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117479478 (aaas)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117479478 (aaas)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117479478 (aaas)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_Aladin
Beta-prop_THOC3
Beta-prop_WDR5
WD40_WDHD1_1st
WD40
Beta-prop_WDR3_1st
ANAPC4_WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
eIF2A
Beta-prop_WDR19_1st
PD40
Beta-prop_WDR35_TULP_N
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
117479478
NCBI-ProteinID:
XP_033982331
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MCSLALFPAPLPAGQSTLCESNNELLSGGGSTEDRLKQESSPLSLYFPRESLKLHCRTES
SSKAAFLDHSETLWMRSAAAWRDGGFTGLLDEITNSNTEVPKWMSVSSGFTLALIRWFSS
FHGSLFPHLTMSSEDMLAEFSQVLNWSDCVVRAFAWHPHADKFALALLDDSIKIYNPKSA
TTPTLKHRLQKSVAAVQWKPLCASALAVACQNCLLVWHVDPCSLSTRPSSGCAQVLSQPG
HSPITSISWSPSGSLLVSASPMDTAMMVWDVAAESCVPLQRVGGGGVTFLSWSPDGSHVL
ASTPSALFRVWETRMWTCERWPCVKGRCQSGCWSPDGSRLLFTVQGEAVIYALTFTDSPA
GVSSCTSKGPQAASVVADLSETTFNTADGDIIVGGEIQSLAWDSTGERLAVLLKGDPQAA
DRPAVIAVFKTRTNPVFELLPCGFVQGEAGAEARLIQFSPNFQHGALLTVCWSSGRITHV
PFYFLSTGVPHFGLGGSPSLPRPQERPADFNQSLFTELAS
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtgctctctggcgctgttccccgctcctctgcccgccggacagagcactctgtgcgag
tccaacaacgagctgctgtccggaggaggctccacggaagaccgactcaaacaggagtcg
agtcctctgagtttgtattttccccgagagtctctgaagctccactgtcgcacagaaagc
agcagcaaggcagccttcctggaccactctgaaacactgtggatgaggagcgcagcagca
tggcgggatggtggtttcacagggctactggatgaaattaccaactcaaatacagaagtg
cctaaatggatgtcagtgagttctggcttcacgctggcgttgatccgatggttctcctcc
ttccacggctccctgtttcctcatctcacaatgagcagtgaggacatgctggctgagttt
tcacaagtgctcaactggtcggactgtgtggtgcgagccttcgcctggcacccccacgca
gataagtttgctctagccctgctggacgactccattaagatctacaaccccaaaagtgcc
accacccccacgctgaagcaccgtctgcagaagagtgtcgcagcggttcagtggaagcct
ctgtgtgcgtcggcgctcgctgtcgcctgtcagaactgtttactggtgtggcacgtcgac
ccctgctccctgtccaccaggccttcctccggctgcgctcaggttctgtctcagcccggt
cactctcccatcacgtccatctcctggtcgccgagcggctctctgctggtgtccgcctcc
cccatggacaccgccatgatggtttgggacgtggctgcagagagctgtgtgcctcttcag
cgtgtcggaggggggggggtcaccttcctgtcctggtcccctgacggcagccatgttctg
gcctccacgccctcagccctgttcagggtttgggaaaccaggatgtggacctgtgagcga
tggccatgtgtgaaaggacgctgccagtctggctgttggagtccagacgggagtcgcctt
ctcttcaccgtacagggggaggcggtcatctacgctctgaccttcactgactctccagca
ggcgtttcttcatgcacatccaaaggtccgcaggcagcatcggtggtggccgacctatca
gagacgacctttaacacggcagatggagacatcattgttggaggagagatccagtcttta
gcgtgggactcaacaggagagaggctggcggtgcttctcaagggagatccacaagcagca
gaccggcctgcagtcatagccgtgttcaagacgagaaccaaccccgtctttgagcttctg
ccttgtggttttgttcaaggggaggccggcgctgaggccagactcattcagttcagtccc
aacttccagcacggagctctgctcactgtgtgttggtccagtggaagaatcacccacgtg
cctttctacttcctgagcactggggtcccacactttgggctgggtggcagcccgtccctg
ccccggcctcaggagagacctgcagacttcaaccagtcgctcttcacagaactcgcctct
taa
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