Trematomus bernacchii (emerald rockcod): 117479853
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Entry
117479853 CDS
T09643
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tben04054
]
117479853
Pattern recognition receptors [BR:
tben04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117479853
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
LRR_6
FISNA
PYRIN
NOD2_WH
PRY
LRR_1
LRR_4
SPRY
MatP
Motif
Other DBs
NCBI-GeneID:
117479853
NCBI-ProteinID:
XP_033982847
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MATLKEILFSTLEQLGKKDFEEFKWHLQQKVLGFKGIPESRLEDALRTQTVDHMFLNYCI
KTIEVTKYVLKKINRNDLVDELSKIPSEPTEILTQCQRTLKLNLEKRIEKIIKTGNSRPL
NEIYTEIYITKGETTAEEHEVRQIETASWKPDRPETTIRQEELFKALPGRDAPIRVMTKG
VAGIGKTVLTQKFTLDWAEGKANQDIQFTFPLPFRELNRLKKNYSLVELVHHFFTETRDA
GICRFDQFSVVFIFDGLDECRLPLDFHNNEILTDVTESTSVDVLLTNLIRGKLLPSARLW
ITTRPAAANQIPPECLDMVTEVRGFTGPQKEEYFRKRFRDKKQADTIISHIKTSRSLHIM
CHIPIFCWISASVLEDMLKTREGGELPKTLTEMYIHFLVILCKLRNVKYDGKSETDSWSP
ESRKMMEALGKLAFEQLQKGNLIFYDHDLTDCDINITEASVYSGVFTQVFREEKGLYTDT
VFCFVHLSVQEFLAALHVHLTFINSGVNLLAEEPTTSQHSEVKPTLTHLYQSAVDKALQS
PNGHLDLFLRFLLGLSLQTNQKLLHGLLKETGSDSEINQKTVEYIKKKIDEDLSPERSIN
LFHCLNELNDSSLEQRIQYYLWSGRLSRNNLSPAQWSALVFILLSSGKDLDVFDLKKYSA
SEKALQRLLPVVKASRKALLSGCKLSERSCEALSSVLSSQSSSLRELDLSNNNLHDSGVK
RLSAGLKSPHCELETLSLSGCMVTEEGCVSLALALSSDTSHLRELDLSNNDLQDSGVTRL
CAGLESPHCELETLSLSGCMVTEEGCVSLASALSSNPSHLRELDLSNNDLQDSGVKLLSA
GLESPHCELETLSLSGCMVTEEGCVSLASALSSNPSHLRELDLSYNHPGDSGEKLLSAGR
EDSLWRLETLRLDHGGEQRLQPGVRKYSCELTLDSNTVKRYLILSEDNRKEEQPYPDHPE
RFEYWPQLMCREALTGRCYWEVERRGEVDIAVTYRGIRRKGDGGECRFGWNDQSWRLNCS
GRGYSVWHNERETNISSSSSSSSPFFPSSSGRVAVYLDHPAGSLSFYRVSSDTLTHLHTF
RTTFTEPLYAGFGFWSDGCSVSLCPL
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggcgacactgaaagagatcctcttcagtactttagaacaattggggaaaaaggacttt
gaagaattcaagtggcacctgcagcagaaggtcctaggattcaaaggaatcccggagagt
cgactagaggatgcattgcggacgcaaactgtggaccatatgtttctgaactactgcatt
aagactattgaagtgaccaaatacgttttgaagaagattaatcggaatgatctggtggac
gaattatcaaaaatcccatcagaaccgacagagattcttactcagtgccaaaggacgctc
aaattaaacctggagaaaagaattgagaaaatcataaaaacgggtaattcaagacctcta
aatgaaatctacacggagatctacatcaccaagggagaaactacagctgaggagcatgag
gtcagacagattgaaacagcatcctggaaaccagacagaccagaaacaaccatcagacaa
gaagaactctttaaagccttacctggaagagatgcaccaatcagagtgatgacaaaggga
gtggctggcatcgggaaaacagtcttaacacagaagttcactctggactgggctgaaggc
aaagccaaccaggacatccagttcacatttccattacctttcagagagctgaataggctg
aagaaaaattacagcttggtggaacttgttcatcacttcttcactgaaaccagagacgca
ggaatctgcaggtttgatcagttctcggttgtgttcatctttgacggtctggatgagtgt
cgacttcctctggacttccacaacaatgagatcctgactgatgtcacagagtccacctca
gttgatgtgctgctgacaaacctcatcagggggaagctgcttccctctgctcgcctctgg
ataaccacacgacctgcagcagccaatcagatccctcctgagtgtctggacatggtgaca
gaggtccgagggttcactggcccacagaaggaggagtacttcaggaagagattcagagat
aagaagcaggccgacaccatcatctcccacatcaagacctcacgaagcctgcacatcatg
tgccacatcccaatcttctgctggatctctgcttcagttctggaggacatgttgaaaacc
agagagggaggagagctgcccaagaccctgactgagatgtacatccacttcctggtgatt
ctatgcaaactgaggaacgtcaagtatgatggaaaaagtgagacagattcctggagtcca
gagagcaggaagatgatggaggctctgggaaaactggcttttgagcagctgcagaaaggc
aacctgatcttctatgatcacgacctgacagactgtgacatcaatatcacagaagcctca
gtgtactcaggagtgttcacacaggtctttagagaggagaaaggactgtacacggacacg
gtgttctgcttcgtccatctgagcgttcaggagtttctggctgctcttcatgtccatctg
accttcatcaactctggagtcaaccttctggcagaagaaccaacaacctcccagcattct
gaagtcaaacctacactaacacatctctaccagagtgctgtggacaaggccttacagagt
ccaaacggacacctggacttgttccttcgtttcctcctgggtctttcactgcagaccaat
cagaaactcctacatggcctgctgaaagaaacaggaagtgactcagagatcaatcagaaa
acagttgagtacatcaagaagaagatagatgaagatctgtctccggagagaagcatcaac
ctgttccactgtctgaatgaactgaatgatagttctctagagcagcggatccaatactac
ctgtggtcaggacgtctctccagaaataatctgtctcctgctcagtggtcagctctggtc
ttcatcttactgtcatcaggaaaagatctggacgtctttgacctgaagaaatactctgct
tcagagaaggctcttcagaggctgctgcctgtggtcaaagcctccaggaaagctctgctg
agtggctgtaaactgtcagagagaagctgtgaagctctgtcctcagtcctcagctcccag
tcctctagtctgagagagctggacctgagtaacaacaacctgcatgattcaggagtgaag
cggctgtctgctggactgaagagtccacactgtgaactggagactctcagtctctcaggc
tgtatggtcacagaggaaggctgtgtttctctggctttagctctgagctccgacacctcc
catctgagagagctggacctgagtaataacgacctgcaggattcaggagtgacgcggctg
tgtgctggactggagagtcctcactgtgaactggagactctcagtctctcaggctgtatg
gttacagaggaaggctgtgtttctctggcttccgctctgagctccaacccctcccatctg
agagagctggacctgagtaacaacgacctgcaggattcaggagtgaagctgctgtctgct
ggactggagagtcctcactgtgaactggagactctcagtctctcaggctgtatggtcaca
gaggaaggctgtgtttctctggcttcagctctgagctccaacccctcccatctgagagag
ctggacctgagctacaatcatccaggagactcaggagagaagctgctgtctgctggacgt
gaggattcactctggagactggagacactcaggctggaccatggtggagagcagaggtta
caaccaggtgtgaggaagtattcctgtgaactcaccctggactcaaacacagtgaagaga
tacctcatactgtctgaggacaacaggaaggaggagcagccatatcctgatcatccagag
aggtttgagtactggcctcagctgatgtgcagagaagctctgactggtcgctgttactgg
gaggtcgagaggagaggagaggttgatatagcagtgacttacagaggaattaggaggaaa
ggagacggaggggaatgtaggtttggatggaatgatcagtcctggagactgaactgctct
ggtagaggttactctgtctggcacaatgagagagaaacaaacatctcctcctcctcctcc
tcctcctcccccttcttcccctcctcctctggtagagtagcagtgtatctggatcatcct
gctggctctctctccttctacagagtctcctctgacacactgacccacctccacaccttc
agaaccacattcactgaacctctctacgctgggtttgggttctggtcagatggctgctca
gtgtctctgtgtcctctgtag
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integrated database retrieval system
