Trematomus bernacchii (emerald rockcod): 117481161
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Entry
117481161 CDS
T09643
Symbol
trappc10
Name
(RefSeq) LOW QUALITY PROTEIN: trafficking protein particle complex subunit 10
KO
K20307
trafficking protein particle complex subunit 10
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117481161 (trappc10)
Membrane trafficking [BR:
tben04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
117481161 (trappc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
TPR_2
TPR_12
TPR_1
TPR_14
SNAP
TPR_8
TPR_19
TPR_7
Gryzun-like
Mad3_BUB1_I_2
Motif
Other DBs
NCBI-GeneID:
117481161
NCBI-ProteinID:
XP_033984622
LinkDB
All DBs
Position
Unknown
AA seq
1267 aa
AA seq
DB search
MECQEEKPIIYTMENKPIVTCAGDQGLFTSLYTSLAQQLPREPMEWRRTYGRAPKMIHLE
ANFVQFKEELLPKDGNKALLTFPFLHIYWTDCCDTEAYKSTVKEDMMRWQNSLRTHGSAD
WVIIVVETNDTKKKNKTNILPRSSIVDKIRSDFCNKQNDRCVVLSDPLKDSSRSQESWNS
LLLKLRTLLLMSFTKNLGRFEDDMRTLREKRTQPGWSFCEYFMVQEELAFVFEMLQQFED
ALVQYDELDALFTQYVLNFGAGDTANWLGSFCAPVNNWSGLLLRRPIDMEKRDGIQRGEA
SLLDLRSYLFSRQCTLLIFLLRPWEVTQRALELLHNCVQELRLLEVSVVEGALDCWVFLS
CLEVLHRIEGCCDQAQLAANCSHTVGLWAYATDKLKSLGELCGLVSEKGPTSEDLNRTVD
LLAGLGDERPETVSSLQSPYKKLKEALSSVEAFERHYLELSHAAMEMYRAISRLRSARLV
GKSLAEFYMKKGDPEKAEAFLQEALKSYVSEGWSLPVTHTRKQIAECQKLLGRTEDYLQT
SALLAGDANLTMEERKHFCQEILTFAGKSEDQSDKVTLSMGVFSQLTRLQFQPATASVHS
GAVLQVEINLRCLMPVSVHIQQLAASIHFDLERAGTNGRSKGAARQIMPGTVEFSHDTSS
AGPSSSSGGPPLELEEIQDRSPTDNSLNSTGVVCKNTHLVMRLPESISLPDTPDFVSPPA
ITLKEGAQMLKVQDVTLEPGNNSITFTAPSGQPGTYTLRQLFATVGQVQFVLPHIYPSVQ
YEVYSQEPQLTVEPLSEPLLAGLSQMVKFTLLTGHYTVKKGDALQLSNTDTMPILPSTSC
SARISNPTGELVGESALSIQSSEKVTSISLPATPPYHTLEFQLEVLCIIPSGSDHPPNER
LTNGEVRHRPRSYSHPDTPMTAIDQRMSIDCPWSIYSTLLALTFYIPFKTKHSLLSAGNR
KYIQVCVQNMSDKNFTLAEVKLTEKLTEKQNASLELESLNTKTQQLLCSKHSLFCLWEVR
WQDDLPSCLQCVFSTNFSSLKQDASAFKPFQYQFQLERVTTLYSVRAEILPPAGEQNCRS
GFLCGLEVCITRLTEPAEGEITEDSKTDTEGLKTTKLMYEVADSSSNWAVCGKSSGMVSM
PMTADATHKVQIEVMPLFAGHLPFPKIKVLKYLPHTAAVAIQPDPDSCVENDSLSLLDKA
LDDGGDTASIRSRGSVHSVGSGEQQQRGVAMPRLEPFSPGQVFNHIHTQQVLVLPATDDH
IMEVNAT
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtcaagaggaaaagccgatcatctatactatggaaaacaagccgattgtgaca
tgtgctggagaccagggcttgtttacgtcgctctatacctcattggcccaacaacttccg
agggagccaatggaatggaggaggacgtatggccgtgcaccaaaaatgatccaccttgaa
gctaactttgtccagtttaaggaggagctgctcccaaaggacggcaacaaggctctcctc
accttccccttcctccacatctactggaccgactgctgtgacacagaggcgtataagagc
acggtgaaggaggacatgatgcgctggcagaacagcttgcggactcatggctcagcagac
tgggtcatcatcgttgtggagacaaacgacactaagaagaagaacaagactaacatcctg
cctcggtcatccatcgtggacaagatccgcagcgatttctgcaacaagcagaatgacagg
tgtgtggtgctgtcggatcctctgaaggactcgtcccggtctcaggaatcctggaactcc
ttgctgctcaagctgcgaaccctcctcctcatgtccttcacaaagaacctgggccgcttt
gaagacgacatgcggacgctccgagagaaacgcactcagcctggctggagcttctgtgaa
tacttcatggtccaggaggagctggcctttgtttttgagatgctgcagcagtttgaagat
gctttggtccagtatgatgaactagatgctctttttacccaatatgtcctcaactttgga
gctggagatacggcgaactggctgggctcgttctgcgctcccgtgaacaactggagcggc
ttgctgcttcggcggcccatcgacatggagaagagggatgggatccagcggggggaggcc
agtctgctggatctgaggagctacctgttctcccgacagtgcaccttgctcatcttcctc
ctgaggccctgggaggtcactcagagagccctggagctgctgcacaactgtgttcaggag
ctacgcctgctggaggtgtcagtggtggagggggctctggactgctgggtgtttctcagc
tgcttggaggttctgcacaggatcgagggctgctgtgatcaggcccagttagctgctaac
tgctcacacactgtcgggctgtgggcctacgccactgacaagctgaagtccctgggggaa
ctctgtggcctggtgtcagagaagggacccacctctgaggacctgaaccggactgtggat
ctgctggccggtctgggggatgagaggcctgagactgtcagcagtttacagagcccttac
aaaaagctgaaggaggccttgtcttctgtggaagcctttgaaaggcactatcttgagctc
tctcatgctgctatggagatgtacagggccatcagccgactgaggtctgccagactggtg
ggaaaaagcctggctgagttctacatgaagaagggggaccctgagaaggcagaggctttc
ttacaggaagctctgaagtcctacgtatcggaggggtggagcctccctgtcactcacacc
aggaagcagatcgctgagtgtcagaagctgctgggcaggactgaagactacttacaaacc
agtgccttgttggctggtgatgcgaatctgaccatggaggagaggaagcacttttgtcaa
gaaattctgacctttgccggcaagtctgaagatcagtctgacaaagtcactctcagcatg
ggtgttttttctcaactcacgcggctgcagttccagccagccacagcctcggtgcactca
ggagccgtcctgcaggtggagattaatctgcgatgtttgatgcccgtgtcggtgcacata
cagcaactagcggctagcattcactttgacctggagcgtgcagggactaatggaaggtct
aagggagctgccagacaaattatgccagggacagtggagtttagccacgacacctcgtca
gcgggaccctcctcctcctcaggtgggccccctttagagctcgaggagattcaggacagg
agtccaacggacaattctctcaactctacaggagtggtgtgtaaaaacactcatctggtc
atgcggcttccggaaagcatctcactgccggacacgcccgactttgtcagccctcctgcc
attaccctgaaggaaggagcacagatgctgaaagtgcaggatgtaacgttagagcccggg
aataacagcatcacattcacagcaccaagtggacaaccgggtacgtacacactgcgccag
ctgtttgccaccgtgggtcaggtgcagtttgttctgcctcatatctacccatcagtccag
tatgaagtctattctcaggagccacaactcaccgtggagcctctatcagagccgctgttg
gccggtctgtctcagatggtgaagtttactctgctgacgggtcactacactgtgaagaag
ggtgacgctctgcagctcagcaacaccgacaccatgcccatcctgccctccaccagctgc
tccgcccgcatcagcaaccccacaggtgagttggtgggggaaagcgctctgtccatccag
tcgtctgagaaggtgaccagcatcagcctgcccgccacccccccgtaccacactctggag
ttccagctggaggttctgtgcatcatcccgtccgggtccgaccacccccccaacgagagg
ctgaccaacggagaggtccgccaccgaccacgcagctacagccatcctgacacccccatg
accgccatcgaccagaggatgtccattgactgtccttggtcgatctactccacgctgctg
gccctcaccttctacatccccttcaaaaccaaacactctctgctttctgctggtaacagg
aagtacatccaggtgtgtgtgcagaacatgtcggataagaacttcacgctggcagaagtg
aagctgacggagaagctgacggagaagcagaatgcatcactggagctggagtccctcaac
actaaaactcaacagcttttgtgcagtaagcacagtttgttctgcttgtgggaggtgagg
tggcaggacgacctgccctcctgtctccagtgtgtcttctctacaaacttctcttcgctc
aaacaagacgcctctgccttcaaacccttccaataccagttccagctcgagagagtcact
acgttgtacagtgtgagagcagagatcctgcctcctgctggggagcagaactgtcgctcc
gggttcctctgtgggctggaggtgtgtataacacgcctgactgaacctgcagagggagag
atcacagaggacagcaagaccgacactgagggcctcaaaaccacaaagctcatgtatgaa
gtggctgacagcagcagtaactgggcggtgtgtgggaagagctcagggatggtttccatg
ccgatgacggcggacgccacccacaaggtgcagatcgaggtgatgcctctgttcgcagga
catctgcccttccccaagatcaaagtgctgaagtacctgcctcacactgcagcagtggcc
attcaaccagaccctgacagctgcgtggagaacgacagtctgtccctgctggacaaggct
ctggacgacgggggggacacggcgagcatccgcagccggggtagcgtgcactctgtgggc
agcggcgagcagcagcagaggggcgtggccatgccgcgtctggagcccttcagcccggga
caagtgttcaaccacatccacacacagcaggtcctggtgctgcccgccaccgacgaccac
atcatggaggtcaacgctacatga
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