Trematomus bernacchii (emerald rockcod): 117482022
Help
Entry
117482022 CDS
T09643
Symbol
znf827
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein 827
KO
K27104
zinc finger protein 827
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117482022 (znf827)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117482022 (znf827)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_16
zf-H2C2_2
zf-H2C2_5
zf-C2H2_4
HVO_2753_ZBP
zf-C2H2_6
zf-C2H2_5
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
117482022
NCBI-ProteinID:
XP_033985863
LinkDB
All DBs
Position
Unknown
AA seq
1520 aa
AA seq
DB search
MPRRKQEQPKRLPSHVDSNEEGGPDDGPVEEEGWFGNASDTRSESSSYGDTQDELLMARG
SSPDERPGVSSGSGDHDTCGGESSLGCPTPVHRASLELLGLDGDAFSAQDTLSSVVSSLY
GEAASRALGKPLSSNLRRLLEAGSLKLDTGELLGRSSRGGAGGESPPIGLVPPLTLSPSS
HHAQQLSALARKLANNNNNSGSASPASLAPSVTNIKQEPLDPFNSVTPSNGSGFVWAGVA
DKWPPASCSTPCGSSLSPDSAIQKLKAAANAVLQDKNAVAASSTNSSSSSTSASSGVPTL
GGGGRGDDVVRFDAFNSPFSPQSASSTLAALSKKVSERSQASSTTSAATDHQSSASSFLS
LVSMTSSAALLKEVAARAAGNLLAEKKDSSSLATAGVLQEDVKPLLDKNHNSTAPSTPTQ
TMDMLLPSTPNSRGKPNSQAGSPEDGGKPFQCPVCGLVIKRKSYWKRHMVIHTGLKSHQC
PLCPFRCARKDNLKSHMKVHQHQDRGETFQCELCPFTSSRHFSLKLHMRCHQHFPRTDVK
VKEELTTDTEGEGSLMGDSGSADLRGTEMSPLHSDSRQQVSPSLEASSNHVHIKEEPQER
DLSVLSPFSMCRDRPISSANSLDLPGVGVGLGLRSGLRSSPSGPTIASIFSPDITTKTAT
DLLMKLSAANQRETLKSPFHMKEEPKAEEALSPRPSSQSQSQVQPSFPATFCHNGPMGAA
ERLGSLKQREGSPMMKNNLLNQDINIKVASELLMKLSENSKDHYQRVKVKAEPMEVDPPP
ADRSPPASHRLAFSTLGASEKTEPLSNLPETLARPQKDLFSQDISVKMASELLFKLSEKV
SKANNHKDNNMVGINSPFLDECFRQSPFNSRSKSSSPAEASSSTRALFHDSEKDDGELGN
GIAQWRLNEQLFPCPVCGKVFGRQQTLSRHLSLHTEERKYKCHLCPYAAKCRANLNQHLT
IHSVKLVNTDAEQIVSAVTAESAERKNCLYYYSCHVCDFQTELNAQFVSHMSLHVDKEQW
MFSLCCSICEYVCMEENDMKNHISTGHAGLNSRSPLSETKSTSSSLSALSDSLNSCEGGD
LTHVNEELRGLLALPSSAGSQSSSGSHSGSGTEDKSEKGFECVFCNFVCKTRSMYERHLQ
IHLITRMFECDVCHKFLKTPEQLLEHKKCHTVPSGGLKCPFCIYSTNRPAAMECHLKTHC
KMEYRCRICQGLWPDQASLEAHMRGHRLGNHYKCEQCGYLSKTANKLIEHVRVHTGERPF
HCDRCSYSCKRKDNLNLHKKLKHAPRQTFGCQECPFTTTHPFVFSRHLKKHQSGGAGGLD
GGLGEEEEEEEEGEEEDEEAGEEELPLQGSSPGGSSLRTGQENFLFCRGGGSSGGSGSNS
PLMSLTASQALQSVALSLTLGKPQGAGGPLHCLLGTNGNSGCRTPGGPSGGPSLFFPSSR
HLLEQYRNYDRAHLMPLTTLFTQNSRFTFHSHPHSRWRPATSPLLFASNSASPSRSPHSP
SSHKHSFMAYLGLMERAKTV
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggaggaagcaggagcaacccaagcgcctgccttcacatgtggacagcaacgag
gaagggggccctgatgacggtccggtggaggaggaaggctggtttgggaatgcttctgac
acgcgctcagagtcgtcgtcctacggagacacgcaggatgagctcctcatggccaggggc
tcgtctcctgatgaacggcctggagtcagcagcgggtccggggaccacgatacctgcgga
ggtgagagctcattgggttgccccacacccgtccatcgtgcctctttggaacttctcgga
ctggatggagatgcattctcggcccaggacacactctcctccgtggtatcatctctgtac
ggtgaggcagcgtctcgcgccctggggaaacccctcagcagcaacctgcggcgcctccta
gaggccgggtcgctgaaacttgacactggggagctcctggggcggtcatccagggggggg
gctgggggggagtctcctccaataggtctagttccacctttgaccctctcaccgtcttcc
caccatgcccagcagctaagtgctcttgcccgaaaactggccaataacaacaacaacagc
ggctcagcctccccagcctccttggcaccctcagtcaccaacattaagcaagagcccctc
gatccctttaactcagtcacccctagcaatggcagtggctttgtatgggcaggtgttgca
gataagtggccgccggccagctgctccacgccctgcggctccagcctgtcgccggactct
gccatccagaagttaaaagcagcagcaaacgctgtacttcaagacaagaatgccgtagcc
gcctcgtctacgaattcttcctcctcctccacatcggcctcgtctggagtacccaccctg
ggagggggtggccgaggggacgatgtggtgcgctttgatgccttcaactctccgttcagc
ccacagtcagctagctccaccctcgctgccctttccaagaaagtcagcgagcggagccaa
gcctcgtcaacgaccagcgctgcgactgaccaccaatcctcagccagctcctttctgtct
ctcgtgtcaatgacctcctctgctgccttgctcaaagaggtggcagccagggcggcggga
aacctgctggcagagaagaaggacagttcctccttggcgactgctggggtcctccaagag
gatgtgaagcccctgctggacaagaaccacaattctaccgctccctccacacccacgcag
accatggacatgctgttgccctctactccaaatagcagaggcaaacccaacagccaagca
ggctctcctgaggatggtggcaaaccgttccagtgtcctgtgtgtggactggtcatcaaa
cgcaagagctactggaagagacacatggtgatccacacaggcttgaaaagccaccagtgt
cccttgtgtcccttccgctgcgctcgcaaagacaatctcaagtcccacatgaaggtacat
cagcaccaggaccggggtgagacgtttcagtgtgaactctgccccttcacctcctcccga
cacttcagcctgaagcttcacatgcgctgccaccagcacttcccccgcacagacgtgaag
gtgaaagaagagctcaccacggacacggagggcgagggctccctgatgggtgacagcggc
tccgcagacctcagagggacggagatgtcgccgctgcactcagactctcggcagcaggtg
tccccttcgctcgaggcctcgtccaatcacgtccacatcaaggaggagccgcaggagaga
gatctgtccgtgctctcccccttcagcatgtgcagggaccgtcccatcagcagtgccaac
tccctggaccttcccggggtcggggtcgggctcgggctcagatccgggctcagatccagt
cctagtggtccaaccatagcctccatcttcagccctgacatcactaccaagacggccact
gacctgcttatgaagctttcagcggccaaccagagggagacgctcaagtctccattccac
atgaaggaggagcccaaagcggaggaagcgttgagccccaggccctcctcccagtcccag
agccaggtacagccaagcttccctgcgactttctgccacaacgggccaatgggggcagca
gagcggctggggtccctgaagcagagggaaggaagccccatgatgaagaacaacctgctg
aaccaggacatcaacattaaggtggcctctgagctgctcatgaagctctcagagaacagc
aaagaccattaccagagggtgaaagtaaaggcagagcccatggaggtggacccgccccct
gcagaccgcagccccccggcctcacaccggctggccttcagcactttaggggcgagtgag
aagacggagccattgagtaacctcccggagacgctggcccgcccccagaaagacctcttc
tcccaagacatatcggtcaaaatggcctctgaacttctgttcaaactgtcagaaaaagtc
agcaaagccaacaaccacaaagacaacaacatggtgggaataaacagtccgtttctggat
gagtgcttcagacaatcaccctttaactctcgctcgaagagctcttcccccgcagaagca
agctcttctaccagggcactattccacgactcagagaaggacgacggggagctgggaaac
gggatcgcccagtggagactaaacgagcagctcttcccctgtcctgtctgtggcaaagtg
ttcggtagacagcagactctctccagacatctgtctctacacacagaagagaggaagtac
aaatgtcacctttgtccttatgcagccaagtgcagggctaacctcaatcagcacctgacc
atccactctgtgaagctggtcaacacggacgccgagcagatcgtcagcgctgtgaccgcc
gagtccgccgagcgcaagaactgcctgtactactacagctgccatgtgtgtgatttccag
accgagctgaacgcccagtttgtcagccacatgtcgctccatgtggacaaggagcagtgg
atgttctcgctgtgctgcagcatctgcgagtacgtctgcatggaggagaacgacatgaag
aaccacattagtacgggacatgcaggtctgaactcgaggagtcccctcagcgagaccaag
agcacctcctcgtccctctcggccctcagcgactcactgaacagctgcgagggcggagac
ctcacccacgttaacgaagagctcaggggtctgctcgccctgccctcctctgccggcagc
cagtccagctctgggagccactcggggtccggaactgaggacaagtctgaaaaaggcttc
gagtgtgtcttctgcaattttgtgtgcaagacgcgtagcatgtacgaacggcacctgcag
atccacctcatcacgcgaatgttcgagtgcgacgtctgccacaagttcctcaagacgccc
gagcagctgctggagcacaagaagtgtcacaccgtcccctccggagggctcaagtgccct
ttctgcatctactccaccaatcgaccagcggccatggagtgccacctgaagacgcactgt
aagatggagtaccgctgccgcatctgccagggcctgtggcccgaccaggcctcattggag
gcccacatgcgcgggcaccgcctgggcaaccactacaagtgtgagcagtgtggctacttg
tccaagacggccaacaagctgatcgagcacgtgcgtgtgcacacgggcgagcggcccttc
cactgcgaccgctgctcttatagctgcaagcgcaaggacaacctcaacctgcacaagaag
ctgaagcacgcgccgcgccagactttcggctgccaagagtgccctttcaccaccacacac
cccttcgtcttcagccgccacctcaagaaacaccagagcggaggagcggggggactggac
gggggtctgggagaagaagaagaagaagaagaagaaggggaggaagaagatgaggaggcg
ggagaggaggagctgccactccagggatcctcaccagggggctcctcgctgcggacgggt
caggagaacttcctgttctgcagaggaggggggagcagcggggggagtgggagtaacagc
ccgctcatgagcctgacggcgtcccaggcgctgcagtccgtcgccctgtccctcactctg
ggtaagccccagggcgccggcggccccctgcactgcttactcggcactaacggaaacagc
ggttgcaggacccccggcggcccgagcggcggcccctccctcttcttcccctcctcccgc
cacctgttggagcagtacaggaactacgaccgggcgcacctgatgcccctcaccaccctg
ttcacccaaaacagccgcttcacattccactcgcacccccactccagatggcggcccgct
acctctcctctcctcttcgcctccaactcggcgtccccctcccgctctccacactcaccc
tcctcccacaaacactccttcatggcctacctgggactgatggagagagccaagactgtt
tga
DBGET
integrated database retrieval system
