Trematomus bernacchii (emerald rockcod): 117484278
Help
Entry
117484278 CDS
T09643
Symbol
adamts18
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 18
KO
K08632
a disintegrin and metalloproteinase with thrombospondin motifs 18 [EC:3.4.24.-]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117484278 (adamts18)
Peptidases and inhibitors [BR:
tben01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
117484278 (adamts18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
Reprolysin
TSP_1
ADAMTS_CR_2
Pep_M12B_propep
TSP1_spondin
PLAC
Reprolysin_5
ADAMTS_CR_3
Adt-1
Reprolysin_2
Reprolysin_3
TSP1_CCN
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
117484278
NCBI-ProteinID:
XP_033988643
LinkDB
All DBs
Position
Unknown
AA seq
1248 aa
AA seq
DB search
MDCLFLLIWTLPIPLVGCTPVKLLSTLLSWNIIKTLHIYCSHTSHTVTASYSSSDSHGLN
HDYVFVTPVEVDSDGGYLTHDLTRRSHRSKRSLSSSLHYRLSAFGQDMYLDLQPSTVVGP
GFTVQTLGSNGIATVMDDVGFHNCFYQGFIRNLSASSAAISTCSGLSGLIRVSQEEFLIA
PLPQHLAQQHNYSAPDGHHPHVVYKRSAEHIVHRRSSGPYNTSSATPDNPYLNHHHQQHD
HHDYQHGKLQRQHFCGRRKQYAPKPPADDSFIMPDEFAIPEVEGPGRAKRSPINTNRVGG
LNVETLVVADRKMLEKHGRDNVTTYVLTVMNMVSSLFKDGTIGSDINIVVVSLLLLEQDP
LGLTINHHADQSLNSFCQWQSGLVGKGGKRHDHAVLLTGLDICSWKNEPCDTLGFAPISG
MCSKYRSCTINEDTGLGLAFTIAHESGHNFGMIHDGEGNPCRKTEGNIMSPTLAGNNGVF
FWSTCSRQYLSRFLGTAQASCLVDEPRQIGQYKYPEQLPGQLYNADTQCKWQFGSKAKLC
SLDFVKDICKSLWCHRTGHRCETKFMPAAEGTSCGPDMWCRRGQCVKQGEHGPRAVHGQW
STWSQWSDCSRTCGRGIMYRERSCNSPRPQNNGKFCSGSSRLNQLCNTRPCPLSAVDFRA
QQCAEYNSKPFRGWYYKWKPYTKVDDEDICKLYCIAEDFDFFFAMASKVKDGTSCSDHKG
DLCIDGVCEAVGCDQILGSKASLDACGACKGDNSTCKFFKGQYTLQHRANEYYSMVTVPA
GARSIRVQEMEVSTSYLAARSLKRKYYLTGDWTVDWPGKFHFGGTVFDYQRSFNKPESLY
AAGPTNETLVFEILLQGKNPGVVWEYTLPRTERKPDYSWGVVRSDCSAPCAGGRISNKAI
CLQDQKVQVNSTMCNPHTRPTLGSHLCNTQPCPAYWATGDWGACSRSCGGGQQTRALRCL
RKVTYQREEGVVHSLCPVISPAQVQPCHTQACPPEWSTGSWSQCSKTCGRGLRKRTVFCR
STDPGAKAVVVPDSMCRQHHRPKPQETCVLRRCPKNDRLQWLPTQWGECSRSCGSGTQKR
ELRCGERDSQGGYVEFPIRRCRNMAKPLVDLQQGCNRGPCPEVPRVIAGRSGPVVLGWYS
SPWQQCSVSCGGGVQTRSIQCLRQGRPAAGCLPHQRPVTSRACNTHFCPAAPPATAQRPS
RVAAAGSTLKDEHCVDHFSWCHLVPQHGVCNHKFYGQQCCKSCASKSQ
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggattgcctttttcttctgatatggactttacccatcccgctggtcggctgcacccca
gtcaagctcctgtccaccctcttgtcctggaatattatcaagacgctgcacatttactgc
tcccacacctcccataccgttacggccagctattcttccagcgacagccacggattaaat
cacgactacgtgtttgtaacccccgttgaggtggactctgatggaggatacctgacccac
gatctgaccaggcgaagccatcgcagcaagaggtccctctcttcttctctgcactatcgg
ctctcggcctttgggcaggacatgtacctggacctgcaaccatctactgttgtcggcccg
gggttcacagtgcagaccctgggttcgaacggcattgccacggtgatggatgatgtaggg
tttcacaactgcttctatcagggatttatccgtaacctgtcggcctcctcggcagccata
tctacgtgctctggactgtcaggtttgatccgtgtgtctcaggaggagttcttgatcgcc
cccctgccccaacatctggctcaacaacacaactacagcgcccccgatggtcaccacccg
catgtggtctacaaacgctcagcggaacacatagtccacagaagatcaagcgggccatac
aacaccagttctgcaacacctgacaacccgtatcttaaccatcatcatcagcagcatgat
caccacgactatcagcatggaaagctgcagaggcaacacttctgcggacgccgcaagcaa
tatgctcccaagcctcccgctgacgacagtttcataatgcctgacgagtttgcgataccc
gaggtggaagggccgggaagggcaaagagatcacccattaacaccaacagggtggggggt
ctgaatgtggagaccctggtggtggcagacaggaagatgctggagaaacatggcagggac
aacgtcaccacctacgtcctcactgtcatgaatatggtttccagtcttttcaaagatggc
acgattgggtcagacatcaacattgtggtggttagcttgttgctacttgaacaggacccg
ctgggcttgaccatcaatcaccatgctgaccagtccctcaacagtttctgtcagtggcag
tcaggtctagtggggaaaggtggaaaacgacatgatcatgctgttctcctgaccggactg
gacatctgttcctggaagaatgagccctgtgacaccttgggttttgcacccatcagtggt
atgtgcagcaagtacaggagttgtaccatcaatgaggatacaggactgggcttggccttc
accatcgctcacgagtccggacacaattttgggatgatccatgatggtgaggggaaccct
tgtcgcaagacagaaggcaacatcatgtctcccactctggcgggaaacaacggggtcttc
ttctggtccacctgcagtcgacagtacctcagccgctttcttggaacagcccaggcatcc
tgtctggtagacgagccgaggcagattggtcagtacaaatacccagaacaacttcctggg
cagctgtacaacgcagacacgcagtgcaagtggcagtttggctccaaggccaaactgtgt
agccttgattttgtcaaggacatctgcaagtcgctgtggtgccatcgcacagggcaccgg
tgcgagaccaagttcatgcctgctgcagaaggcaccagctgtggccctgacatgtggtgt
cggcgagggcagtgtgttaaacaaggggagcacggccctagggcggtccacggccagtgg
tcgacctggtctcagtggtccgactgctccaggacctgtggacgagggatcatgtacagg
gagcgctcctgcaacagcccgaggccacagaacaacggtaaattttgctcaggctccagc
cgcctcaaccagctgtgtaacactcggccgtgcccgctcagcgctgtggactttcgggcc
cagcagtgcgccgagtacaacagcaagccattcaggggctggtactacaagtggaagccc
tacaccaaagtggacgatgaagacatctgtaagctgtactgcatcgctgaagacttcgac
ttcttcttcgccatggccagcaaggtcaaagatggcacctcctgctccgaccacaaagga
gatttgtgcattgatggagtgtgtgaggcagtaggctgtgaccagattctgggctcaaag
gcctctctggacgcctgcggggcctgtaagggagacaactccacttgcaagttcttcaag
ggccaatacacccttcaacacagggccaacgagtactactccatggtaacagtcccagca
ggggcccgaagcatccgcgttcaggaaatggaggtgtccaccagctacctggccgcccgc
tccctgaaaaggaagtactacctgaccggggactggacggtggactggccggggaagttc
cactttggtgggaccgtgttcgactaccagcgctctttcaacaagccggagagcctgtat
gccgctggacctactaatgagacgctggtgtttgaaatcctcctgcagggaaagaacccg
ggtgtggtgtgggagtacaccctgccgcgcactgagaggaaacccgactacagctggggc
gtggtgcgctccgactgctctgctccctgtgctggaggtcgtatctcgaacaaggccatc
tgtctgcaggaccagaaggttcaggtcaactccaccatgtgcaatccccacaccagacca
acactgggctcccatctctgcaacacacagccctgccctgcatattgggcgactggagac
tggggtgcctgcagtcgctcgtgtggaggaggccagcagaccagggcgctgcgctgcctg
aggaaagtgacctatcagagggaggagggggtggtgcactccctctgccccgtcatctcc
ccggcccaggtccagccctgccacacccaggcctgcccccccgagtggagcaccgggtcc
tggtcacagtgctcaaagacctgtggccggggcctgaggaagcggaccgtgttctgccgc
agcactgatcccggggccaaagcggtggtggtgcctgacagcatgtgcagacagcaccac
agacccaaaccccaggagacctgcgtcctgcgccgctgccccaagaacgataggctgcag
tggctcccgactcaatggggagagtgctccaggtcttgtggctcaggcacccagaagaga
gagcttcgctgcggggaaagagactcacagggagggtatgtggagttccccatacggagg
tgcagaaacatggccaaacccctagtggatctccagcagggctgcaaccgaggcccctgc
ccggaggtccctcgggtgatcgccggcaggagtggccctgtggtcctcggctggtactcc
tctccctggcaacagtgttctgtttcctgtggcgggggggtccagacccggtccatccag
tgtctccggcagggccgccccgcagccggctgcctgccccaccagaggcctgtcacttcc
agggcgtgcaacacacacttctgccccgctgctccccccgctacagcacagcgcccaagc
cgggtggcagctgctggatcaacactgaaagacgaacactgcgtggaccacttcagctgg
tgtcacctggttccccagcacggcgtgtgtaaccacaagttctacggacagcagtgctgc
aagtcctgtgccagcaagagccagtag
DBGET
integrated database retrieval system
