Trematomus bernacchii (emerald rockcod): 117486526
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Entry
117486526 CDS
T09643
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117486526 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tben02000
]
117486526 (slc6a11b)
Transporters [BR:
tben02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117486526 (slc6a11b)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
117486526
NCBI-ProteinID:
XP_033990904
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MPAEKSGPVINGKPEDGKDPEGSSSSIEKGPYNERGQWNNKIEFFLSVAGEIIGLGNVWR
FPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETAMGQFTTEGGITCWRKICPLFEGIGYA
TQVIQAYLNVYYVVILAWAIFYLFNCFTTELPWASCGHYWNTENCVDSYGENATNITNPN
TTFPVIEFWERRVLKISDGIEHMGGMRWELAMCLALAWFICYFCIWKGPKSTGKVVYVTA
TFPYAMLLVLLVRGVTLPGAWTGIKFYLYPDMSRLSDPQVWVDAGTQIFFSYAICLGCLT
ALGSYNSYNNNCYKDCLMLCCLNSGTSFVAGFAIFSVLGFMAYEQGVPIEAVAESGPGLA
FIAYPKAVTMMPLSPLWAILFFLMLIFLGLDSQFVCVESLVTAVVDMYPDTFRRGYRREY
LILGMSIVSFLVGLIMCMEGGMYVFQLFDSYAASGMCLLFVAIFESICIGWVYGSDRFYL
NIEDMIGYKPVFFIKWCWMILTPGICAGIFLFFLIKYKPLKYNNVYTYPDWGYGIGWFMA
MSSMVCIPLGMIWKIATTPGTFAERIKKLTTPSPDLKMRGKLNALSPYAANDAKLKVDAK
VSTISEKETHF
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagaagagcgggcccgttataaacggtaaaccagaagatggcaaagacccg
gaagggtccagctcaagtatagagaaggggccgtacaatgagaggggccagtggaacaac
aagatcgagtttttcctgtctgtggctggagagatcatcgggctgggcaacgtctggagg
tttccttacctctgctacaagaatggaggaggtgcgttcttcgtcccatatgtcatcttc
tttgtgtgctgcggtatacccgtgtttttcctggaaactgccatgggtcagttcaccact
gagggaggcatcacctgctggaggaaaatctgcccgctgtttgagggtattggctatgca
acgcaggtgattcaagcttatctaaacgtgtactatgtagtgatccttgcctgggccata
ttctacctcttcaactgcttcaccaccgagctgccgtgggcgtcctgtggtcactactgg
aacacagagaactgtgtcgacagctatggagaaaatgccaccaacattacaaaccccaac
acaacctttccagtcattgagttctgggagcgcagagttctgaaaatatcagatggtatt
gagcacatggggggaatgcgctgggagctggccatgtgtctggccctggcctggttcatc
tgctacttctgcatctggaagggacccaagtcaactggcaaggttgtgtatgtgacagct
acctttccttacgccatgctgttggtcctgctggtcagaggagtgacgctgccaggagcg
tggacggggatcaagttctacctctacccggacatgtcccgtctctctgaccctcaggta
tgggtagatgctggaacccaaatcttcttctcctatgccatctgcttgggttgtctcact
gctctgggaagttacaattcctacaacaataactgctacaaggactgcctcatgctgtgt
tgtttaaacagcggcaccagtttcgtagcaggttttgctatcttctccgtgctgggcttt
atggcctacgaacaaggtgttcccatcgaagctgtggcagagtctggtcctggtcttgca
ttcattgcataccccaaggctgttactatgatgcctctgtctccgctttgggccatcctc
ttcttcctgatgctcatcttcctcggtctggacagtcagttcgtgtgtgtggagagttta
gtgacagctgtggtggacatgtacccagataccttcaggagaggctatcgcagagagtat
ctgatcctgggcatgtctatagtctccttcctcgtaggactcatcatgtgtatggagggc
ggaatgtacgtcttccagctgtttgactcgtatgctgccagcgggatgtgtttgctgttt
gtggccatatttgagtccatatgtatcggctgggtgtatggtagtgacagattctacctc
aatattgaggacatgattggctacaaacccgtcttcttcatcaaatggtgttggatgatc
ctgaccccaggcatctgcgctggcattttcctgttcttcctgattaagtacaaaccgctg
aagtacaacaacgtgtacacctatcctgactggggctatggtatcggctggttcatggcc
atgtcctcgatggtctgcatccctctgggaatgatctggaagatcgcgacgactcctggc
acctttgctgagagaataaagaagttgacgactcccagccccgacctgaagatgagaggg
aagctcaacgccctcagcccttacgctgccaacgatgcaaaactcaaggttgatgcgaaa
gtatccaccatctcagagaaagagacgcatttctaa
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