KEGG   Trematomus bernacchii (emerald rockcod): 117488250
Entry
117488250         CDS       T09643                                 
Name
(RefSeq) WD repeat-containing protein 5-like isoform X1
  KO
K14963  COMPASS component SWD3
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    117488250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tben03036]
    117488250
Chromosome and associated proteins [BR:tben03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     117488250
    NSL complex
     117488250
   HMT complexes
    COMPASS/SET1 complex
     117488250
    COMPASS/SET1 complex (yeast)
     117488250
    MLL-HCF complex
     117488250
    MLL3/MLL4 complex
     117488250
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     117488250
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_SCAP NBCH_WD40 Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_VPS8 eIF2A Beta-prop_WDR19_1st Beta-prop_NWD2_C Beta-prop_ACSF4 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_RIG_1st Beta-prop_IFT140_1st Beta-prop_DCAF12 WD40_like Ge1_WD40 PROPPIN RMC1_N Beta-prop_LRRK2 Beta-prop_Vps41 Beta-prop_WDR11_1st Tricorn_2nd Beta-prop_WDR75_2nd VPS8_N WDR54 VID27 MSMEG_3727_PQQ-assoc
Other DBs
NCBI-GeneID: 117488250
NCBI-ProteinID: XP_033992941
LinkDB
Position
Unknown
AA seq 327 aa
MATEEKKPETDTLKQSSSSKSNAAKPNYTVKFTLAGHTKAVSSVKFSPNGEWLASSSADK
LIKIWGAFDGKFEKSIVGHKLGISDVSWSSDSTLLVSASDDKTLKIWDHSSGKCLKTLKG
HSNYVFCCNFNPQSNLVVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV
SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK
CLKTYNGHKNEKYCIFANFSVTGGKWIVAGSEDSSVYIWNLQTKEVVQKLQGHTDVVIST
ACHPTENIIASAALENDKTIKLWRSDC
NT seq 984 nt   +upstreamnt  +downstreamnt
atggcgacagaggagaagaaaccagagacagacaccttaaagcagtcctccagcagcaag
tctaacgcggccaaaccgaactacaccgtgaagtttactctggccggacacaccaaggcc
gtctcctccgtcaaattcagccccaacggagagtggctggccagctcctcggccgataaa
ctgataaagatttggggagcgttcgacggaaagtttgagaaatccatcgtcggacacaaa
ctggggatctccgatgtctcctggtcttcagactccaccctgctggtttctgcgtccgac
gacaaaacactcaagatctgggaccacagctctgggaagtgtctgaagaccctgaagggc
cacagtaactacgtcttctgctgcaacttcaaccctcagtccaacctggtggtgtctgga
tcgtttgatgagagcgttcgcatctgggacgtgaagacggggaaatgtctgaagactctg
ccggctcactccgaccccgtctctgctgttcacttcaacagagacggctcgctcatcgtc
tccagcagctacgacggcctctgtcgcatctgggacacggcgtccggacagtgtctgaag
accctgatcgatgacgacaatcccccggtgtcttttgttaagttttctccaaatggaaaa
tacatcctggctgcgactctggacaacacattaaagctctgggactacagcaaaggaaag
tgtctgaagacatataacggacacaagaacgagaaatactgcatcttcgccaacttctcc
gtcacaggagggaagtggatcgttgcgggatcagaggacagctcggtttacatctggaac
ctgcagaccaaagaggtcgttcagaagctgcaaggacacacagacgtggtgatctccacc
gcctgccacccgacagaaaacatcattgcttcagccgcgctggaaaacgacaaaaccatc
aaactgtggaggagtgactgttag

DBGET integrated database retrieval system