KEGG   Trematomus bernacchii (emerald rockcod): 117489656
Entry
117489656         CDS       T09643                                 
Symbol
stx3a
Name
(RefSeq) syntaxin-3a isoform X1
  KO
K08486  syntaxin 1B/2/3
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    117489656 (stx3a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tben04131]
    117489656 (stx3a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tben04147]
    117489656 (stx3a)
Membrane trafficking [BR:tben04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    117489656 (stx3a)
Exosome [BR:tben04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   117489656 (stx3a)
  Exosomal proteins of other body fluids (saliva and urine)
   117489656 (stx3a)
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 AAA_13 DUF3040 FlaC_arch Synaptobrevin Relaxase_C T2SSF DUF1687 YtxH Tlp Orf78 DUF6584 ETRAMP DUF6480 PilJ DUF6161 DUF2207_C Baculo_PEP_C FUSC Med11 ArAE_1_C DUF6548
Other DBs
NCBI-GeneID: 117489656
NCBI-ProteinID: XP_033995014
LinkDB
Position
Unknown
AA seq 289 aa
MKDRLEQLKATCDQDDDEVEISMDNAAFMDEFFGQIEDIRSSIDKIDENVAEVKKLYSVI
LSAPTSDQKTQDDLEAITNDIKKMANNARNKLKSIERNLESEEQERVSADIRIRKSQHAV
LSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKATTDDELEEMLESGNAAVFTAGIV
DAGVSKQALSEIEARHKDIVRLESSIKELHDMFVDIAMLVESQGDSIDNIEQNVSKSEDH
ITEAREQTKKAIRHQGKARKKMVIIVVVVVVLLAILALIIGLSVGLKTS
NT seq 870 nt   +upstreamnt  +downstreamnt
atgaaggatcgattggagcaactcaaagcgacgtgtgatcaagatgacgacgaggtggag
atctctatggacaatgcagccttcatggatgagttcttcggtcagattgaagacatcagg
agtagtatcgacaaaattgatgagaacgtggctgaagtcaaaaagctttactcggtcatc
ctgtctgctcccacatcagatcagaaaacgcaggatgacttggaggcaatcaccaatgac
ataaagaagatggccaacaatgcaagaaacaaacttaagagcatcgagaggaatctggag
tcagaggagcaggagagggtgtcggctgacattcggatacgtaaatcacagcatgcagtg
ctgtccaggaagtttgtggaggtaatgacaaagtataatgaagcccaggtggacttcagg
gagaggagtaaaggacgtattcagagacaactagagatcactggaaaagcaacaacagat
gacgaactggaggagatgttggagagcggcaatgctgctgtgtttactgcagggattgtg
gatgctggggtctctaaacaagctctgagtgagattgaagccagacacaaagacattgtc
cgtctagaaagtagcatcaaggagctgcacgatatgtttgtagacatcgccatgctggtg
gagagccagggtgacagtattgacaacatagagcagaatgtatccaagtcagaggaccat
ataacagaggctagggaacagaccaagaaggctataaggcatcagggcaaagcacgcaag
aaaatggtgattatagtggtggttgtggtggtcttgctggccatactagctctcataatt
gggttgtcagttggattgaagacaagctga

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