Trematomus bernacchii (emerald rockcod): 117492176
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Entry
117492176 CDS
T09643
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04145
Phagosome
tben04210
Apoptosis
tben04517
IgSF CAM signaling
tben04530
Tight junction
tben04540
Gap junction
tben04814
Motor proteins
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117492176
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117492176
09143 Cell growth and death
04210 Apoptosis
117492176
09144 Cellular community - eukaryotes
04530 Tight junction
117492176
04540 Gap junction
117492176
09142 Cell motility
04814 Motor proteins
117492176
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117492176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117492176
03036 Chromosome and associated proteins [BR:
tben03036
]
117492176
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117492176
04147 Exosome [BR:
tben04147
]
117492176
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117492176
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117492176
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117492176
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117492176
Exosomal proteins of other body fluids (saliva and urine)
117492176
Exosomal proteins of colorectal cancer cells
117492176
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
117492176
NCBI-ProteinID:
XP_033998187
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MRECISMHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TAVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVGDEGEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatatctatgcatgtcggccaggccggagtccagatgggcaatgcctgc
tgggagctctactgcctggagcacggcatccagcctgacggtcagatgccgagtgacaag
accatcggaggaggagacgactccttcaacaccttcttcagcgagactggagccggcaaa
cacgtccccagagctgtctttgtggacctggagcccactgtcatcgatgaagtccgtaca
ggaacctaccgccagctcttccaccccgagcagctgatcaccggtaaggaggacgcagcc
aacaactacgcccgcggtcactacaccgtcggcaaggagatcatcgacctggttcttgac
aggactcgcaaactggctgaccagtgcacagggctccagggtttcctgatcttccactcc
tttggaggaggaaccggctctggcttcacctccctgctgatggagcgtctctctgttgac
tacggcaagaagtccaagcttgagtttgcggtttaccccgccccccaggtgtccaccgct
gtggtggagccctacaactccatcctgaccacccacaccaccctggagcactccgactgt
gcctttatggtggacaatgaggccatctacgacatctgccgcaggaatctggacatcgag
cgccccacctacaccaacctcaacaggctgattggacagatcgtctcctccatcaccgcc
tccctgcgcttcgatggtgccttgaatgtggatctgactgagttccagaccaacttggtg
ccctaccctcgtatccacttccctctggccacctacgccccagttatctctgcagagaag
gcctaccacgagcagctgtcggtcgctgacatcaccaacgcctgtttcgagccggccaac
cagatggtgaaatgcgacccccgccacggcaagtacatggcctgctgcctcctgtaccgt
ggtgatgtggtgcccaaagatgtcaactctgccatcgccaccatcaaaaccaagcgcacc
atccagtttgtggactggtgtcccactggcttcaaggtgggcatcaactaccagcccccc
accgcggttcctggaggagacctggccaaggtgcagagggccgtgtgcatgctgagcaac
accaccgccatcgcagaggcctgggctcgcctggaccacaagttcgacctgatgtatgcc
aagagggccttcgtccactggtacgttggagaggggatggaggagggagagttctctgag
gccagagaggatatggccgccctggagaaggattatgaggaggtgggcaccgacagcgtg
ggggacgaaggagaagaaggggaggagtactaa
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