Trematomus bernacchii (emerald rockcod): 117494031
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Entry
117494031 CDS
T09643
Symbol
cacna1db
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04010
MAPK signaling pathway
tben04020
Calcium signaling pathway
tben04218
Cellular senescence
tben04260
Cardiac muscle contraction
tben04261
Adrenergic signaling in cardiomyocytes
tben04270
Vascular smooth muscle contraction
tben04530
Tight junction
tben04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117494031 (cacna1db)
04020 Calcium signaling pathway
117494031 (cacna1db)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
117494031 (cacna1db)
09144 Cellular community - eukaryotes
04530 Tight junction
117494031 (cacna1db)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
117494031 (cacna1db)
09153 Circulatory system
04260 Cardiac muscle contraction
117494031 (cacna1db)
04261 Adrenergic signaling in cardiomyocytes
117494031 (cacna1db)
04270 Vascular smooth muscle contraction
117494031 (cacna1db)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117494031 (cacna1db)
Ion channels [BR:
tben04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117494031 (cacna1db)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
CAC1F_C
PKD_channel
UL20
Motif
Other DBs
NCBI-GeneID:
117494031
NCBI-ProteinID:
XP_034000557
LinkDB
All DBs
Position
Unknown
AA seq
2002 aa
AA seq
DB search
MHQNSYVRNGWNMLDFVIVIVGLFSVVLEMITKDADSGGQSGGKPGGFDVKALRAFRVLR
PLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCYIRQT
GVLAEEEATPCAVSGHGRHCLLNGTFCREGWQGPNNGITNFDNFLFAMLTVFQCITMEGW
TDVLYWMNDAMGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLR
EKQQLEEDLKGYLDWITQAEDIDPENDEEGDEEGKRNPSMPSETESANTENHNGEDKKSP
CCGPLCRQWRRWNRFCRRKSRTAVKSVTFYWLVILLVFLNTLTIASEHYNQPDWLTEVQD
VANKVLLAMFTLEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGIVETILVELAVMSPLGIS
VFRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGRF
NFDETVTKRSTFDNFPQALLTVFQILTGEDWNTVMYDGIMAYGGHASSGMVVCIYFIILF
ICGNYILLNVFLAIAVDNLADAESLNTAQKEEEEAKKRKNSIKEASIDKKRVAIIDIKDG
DTKVPAEALLEEDKETYPAINTPGGDEEDNENLPEVPLGPRPLRLSELTIKEKTLPIPTG
SAFFIFSSTNPFRVFCHKLINHHIFTNLILVFIMLSSVSLAAEDPIRNCSARNIILGYFD
YAFTAIFTVEILLKILGYADYVFTSMFTFEILIKMTAFGAFLHKGAFCRNYFNLLDLLVV
GVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTT
LLQFMFACIGVQLFKGKFYRCADDAKSSPEECKGNYILYNNGDTALPMVKERIWYNSDFN
FDNVLMAMMALFTVSTFEGWPTLLYKAIDSHKENMGPIYNYRIEISIFFIIYIIIIAFFM
MNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVN
STGFEYVMFVLIILNTLCLAIQHHGQSHLFNYAMDILNMVFTGVFTVEMILKLIAFKPRG
YVGDAWNVFDALVVIGSVVDIILSQSTAIPVVKVIVEPGNTEDSARISITFFRLFRVMRL
VKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQVFGKIAMVDGTQINRN
NNFQTFPQAVLMLFRCATGEAWQEIMLACLPGKLCDPESEYNPGEERTCGSGFAIIYFIS
FYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVV
TLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNL
EQANEELRAVIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKRRKEQG
LVGRRSWEKLNTTMALQAGLRTLHDIGPEIRRAISCDLQGAGLVEADGEEEEDIYRRNGG
LFGNHVNHVGADQQGYSHPTTATQRPLQILPFSCGGSTGPTQTGRRASEGDAGEETEMNS
SPIQYNHHYHSPHPYNNPHCIPTCHQSPIPSNANLNNANVPSLLSMANGRQQKCLLGRDR
PSSAKNRSSVSTYSRGVHNKLWKSHSTRTRYYEAYIRSESSSGLYPTIRREESGGGDSDE
ERGSGEYFSGEEFQEDDIMVTKDRLFNRDQRDAEADLDHMVSRGDQQPDGYFDDDQQPIY
QDDRRSPRRWLLPSPQACTRPTFSFECLRRRSSQDDAPLSPSCTALPLHLVHQQVMAVAG
LDASRIHRRSPTRSLRSWVTPPASPINRDCSPCYTPLIQVDWRSHGSLGSLPGAVKRSSW
YTDGHDGPPSRSHSPSRLQLPADCCSHFLQKRGSAISVVEAVLISEGLGKYAKDPKFVTA
TTNEIADACEMTIDEMESAASNLLNGSIDSCSPGATGSEGSDSQAASQLRDSSIRDYSDE
EPCVALKCEEDLTDEMICITSL
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaaaactcctacgtcagaaacggctggaacatgctggactttgtcatcgtcata
gtggggttgttcagtgtggttctagagatgataaccaaagacgctgactcgggcggccag
tctggaggaaaacccgggggctttgatgtcaaggccctccgagcctttcgcgtgctacga
cccctccgccttgtctctggagttcctagtttacaggtcgttttaaactccattattaaa
gccatggttcccctgctccacatcgctctgctggtcctctttgtcattatcatctatgcc
atcattggcctggagctcttcattggcaaaatgcacgccacatgctacataagacaaaca
ggtgtcctcgcggaagaggaggccacgccatgtgcggtgtctggtcatggccgccactgt
ttgctcaatggtacattttgcagagagggctggcaaggacccaacaacggcatcacaaac
ttcgacaactttttgttcgccatgctcactgtgttccagtgcatcaccatggagggctgg
accgacgttctctactggatgaatgacgcaatgggcttcgagctgccgtgggtctacttt
gtcagtctggtcatctttggatccttctttgttctcaatttggttttgggagtgttgagt
ggagagttttccaaagagcgagagaaggccaaggctcggggagatttccagaagctacga
gagaagcagcagttagaggaagacctgaaaggatacctggactggatcacgcaggcagag
gacatcgaccccgagaacgatgaggagggagacgaggagggcaagcgtaacccgagcatg
cccagtgagacagagtcggcgaacacggagaatcacaacggagaggataaaaaatccccc
tgctgtgggccgctgtgtcgtcagtggaggcggtggaaccgtttctgccgcagaaagagt
cgaacagccgtgaaatctgtgacgttttattggctggtgatcctcttggtgttcctcaac
actctcaccattgcctctgagcactacaaccagccagactggctgacggaagtacaggat
gtagccaacaaagttctcctggcgatgttcacgttggagatgctggtgaagatgtacagt
ttgggcctgcaggcatactttgtgtccctatttaaccgctttgactgtttcgtggtgtgc
ggaggcatcgtagagaccatcctggtggagctggccgtcatgtctccgctgggcatctct
gtattccgttgcgtacgacttctaaggatctttaaagtcacacgtcattgggcgtctctc
agtaacctggtggcgtctctgctaaactccatgaagtccatcgcctccctgttgctgctg
ctctttctcttcatcattattttctccctgctcggcatgcagctatttgggggaaggttc
aattttgacgagactgtgaccaaaaggagcacgtttgataacttcccccaggccctgctc
actgtgttccagatcttgacaggagaagactggaatacagtgatgtatgacggcatcatg
gcgtacggtggtcacgcctcttctggaatggtggtctgcatttacttcatcattctcttc
atctgcggaaactacatcctgctgaacgttttcttggctatcgctgttgacaacctggca
gacgcagagagcctcaatacagcacagaaggaggaagaggaggccaagaagaggaagaat
agcatcaaagaagcaagcatagacaagaagagagttgctataatagacatcaaggatgga
gataccaaggtgccagcagaggcgttgctggaggaggacaaggagacgtatcctgccatc
aacactccaggtggcgatgaagaagataatgaaaaccttccagaagtcccgttggggccc
cgccccctgaggctgtctgaactcaccatcaaagaaaagactctgcccatcccaacggga
agcgctttcttcatcttcagcagcactaacccgtttcgggttttctgccataaactgatc
aaccatcacatcttcaccaatctcatcctggtcttcatcatgctcagctccgtctctctg
gctgctgaggaccccattcgcaactgctctgctcgcaatatcatacttggttattttgac
tatgctttcaccgcaatctttactgttgagatcctgttgaagatcctaggctatgcagac
tatgtcttcactagtatgtttacatttgagatccttattaagatgacagcgttcggagct
tttcttcacaaaggggcgttctgtagaaactacttcaaccttttagacctgctggtcgtt
ggcgtgtctctggtatccttcggcattcagtcctctgctatctcagttgtgaagattctc
cgtgttttgagagtccttcgtccactcagggccatcaacagagccaagggactaaagcac
gtggtccagtgtgtgtttgtggccatcaggaccatcggcaacatcatgatcgtcaccacg
ctgctgcaattcatgttcgcctgtatcggagtgcagctctttaagggtaaattttatcgt
tgcgccgatgatgcaaagtccagcccagaagaatgcaaaggcaactacattctctacaac
aacggggacacagcgctgcccatggtgaaggagaggatctggtacaacagcgacttcaac
tttgataatgtcctcatggccatgatggctcttttcaccgtctccactttcgaaggatgg
cccactctgctctacaaggccatcgactctcacaaggagaacatgggtccgatctacaac
taccgcatcgagatctccatctttttcatcatctacatcatcatcatcgccttcttcatg
atgaacatctttgtcggtttcgtcattgttacctttcaggagcaaggggagaaggagtac
aagaactgtgagctcgataagaaccagcgtcagtgcgtggaatatgctcttaaagctcgt
cctctgcgccgctacatacccaaaaacccttaccagtacaagttctggtatgtggtcaac
tctactggctttgagtacgtcatgtttgtcctaatcatcctcaacaccttgtgtctggcc
attcagcaccatggtcagtctcatctgtttaactatgccatggacatcctcaacatggtc
ttcacaggggttttcactgtggagatgatcctcaaactcatcgcctttaaacccagaggc
tatgttggggacgcctggaacgtctttgatgctctggtcgtgattggaagtgtagtcgac
atcatactgagccagtcgacagccattccagtcgtcaaggtgatagtggagcccgggaac
acagaggacagcgctcgtatctccatcaccttcttccgcctgttcagagtgatgcgattg
gtcaaacttctgagcaggggggagggcatcaggactctgctgtggaccttcatcaagtcc
ttccaggctctcccctatgttgcactcctgatagccatgctgttcttcatctatgctgta
attgggatgcaggtgtttggaaaaatagccatggtggatgggacacaaatcaaccgcaac
aacaactttcaaacttttcctcaagctgtcctgatgctcttcaggtgtgccacaggagag
gcctggcaggagatcatgctggcctgtctgccggggaaactgtgtgatccagagtcggaa
tacaaccccggagaggagagaacctgcggcagcggcttcgccatcatctacttcatcagc
ttctacatgctctgtgctttcctgatcatcaacctgtttgttgctgtcatcatggataac
tttgactatctgacccgcgattggtccattctgggaccgcatcacctggatgagttcaaa
aggatctggtctgaatacgaccctgaagcaaagggcaggattaagcaccttgacgtggtg
actctgctcaggaggatccagcctccgctgggctttggcaagctctgtcctcacagagtg
gcctgtaagcgtctggtggcgatgaacatgcccctcaacagtgacgggacggtcatgttt
aatgccaccttgttcgctctagtccgcactgctctcaagattaaaaccgaaggtaacctg
gagcaagccaatgaggagctcagagctgtgataaagaagatctggaagaggacgagcatg
aagctgctggaccaagtggtgccccctgcaggcgatgacgaggtaacagtggggaagttc
tatgccacattcctgatacaggactacttcaggaagttcaagaggcgcaaagagcaaggc
cttgtaggaaggcgctcgtgggaaaagctgaacacaaccatggctcttcaggccggcctg
cgcacgctgcatgacatcggaccagagatccgtcgagccatatcatgtgacctgcaaggg
gcggggctagtagaggctgatggagaggaagaagaggatatatacaggcgtaacggaggc
ctttttggtaaccatgtcaaccacgtgggtgcagatcagcaaggctactctcacccgacc
accgccacccagcggccgctacagatcctgcccttttcctgcgggggctccaccgggcca
acccaaacgggcaggagggccagcgagggcgacgcaggagaggagacggagatgaactct
tcacctatccagtacaaccatcattatcactccccccatccgtataataacccccactgt
attcccacctgccatcaatcgccaatcccctccaatgccaacctcaacaacgccaacgtg
ccctcgcttctctccatggccaatgggaggcagcagaagtgtttgttagggcgagaccgt
ccatcctctgccaaaaaccggtcatcagtgtccacctacagcagaggagtacacaacaag
ctttggaagtcacactccacaaggacacgctactatgaggcctacattaggtcagagagc
agcagtgggctctaccccaccattcgccgagaggagtcagggggcggagacagcgatgaa
gagcgaggctcaggagagtacttcagtggggaggagtttcaggaagacgacatcatggtc
acaaaggacagattgttcaacagggaccagcgtgatgcagaggcagaccttgaccacatg
gtttccaggggcgaccaacagcctgatggttactttgacgatgaccaacagccgatctac
caagacgacaggcggtcacccaggagatggctcttaccctcgcctcaagcctgcacaaga
ccaacattcagttttgagtgtcttcgtagaagaagtagtcaggatgatgctcctctctct
ccatcctgcacagctcttccactgcaccttgtacatcaacaggtgatggcggtggccggt
ctcgatgccagcagaattcaccgccggtctccaacgcgatcgctccgctcctgggtcacg
cctcctgcctcgcccatcaacagggactgctcaccctgctacacacctctcatacaggtg
gactggcgtagtcacggcagcctgggtagcctccccggagcggtgaagaggagttcgtgg
tatacagacggccatgacggtcctcccagccgcagtcactctccgtcccgcctgcagctt
cccgcagattgctgctctcacttcctgcagaagagaggaagcgctatcagtgtggtggag
gctgtgttgatctccgagggtcttgggaaatatgccaaggaccccaagtttgtgacagcg
accacaaacgaaatcgcagacgcctgcgagatgaccatcgatgagatggagagcgccgcc
agtaacctgctgaacggcagtatagatagctgcagcccaggggccacgggcagcgagggc
tcggactcgcaggccgcctcgcagctcagagacagcagcatccgggactacagcgacgag
gagccctgcgtggctctgaaatgcgaagaggacctaacagatgagatgatatgcatcaca
tccctatag
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