Trematomus bernacchii (emerald rockcod): 117495028
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Entry
117495028 CDS
T09643
Name
(RefSeq) protein transport protein Sec23A
KO
K14006
protein transport protein SEC23
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117495028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117495028
Membrane trafficking [BR:
tben04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117495028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
117495028
NCBI-ProteinID:
XP_034001981
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MATFPEFISQNEDRDGVRLSWNVWPSSRLEATRLVVPLAALLSPLREREDLPPIQYEPVL
CSRATCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPSYAGISEVNQPAELLPQFSTIEYV
VQRGPQMPLVFLYVVDTCLEEEDLQALKESLQMSLSLLPPASLVGLITFGRMVQVHELQG
PEGIAKSYVFRGAKDLSAKQLQEMLGLTKPAAAQTRGAQPAPSPLCNRFLQPVQKVDMTL
TDLLGELQRDPWPVTQGKRPLRSLGVAMSIAVGLLECTFPNTGARIMTFLGGPATQGPGM
VVGDELKTPIRSWHDLEKDNAKFMKKATKHYEALANRACANGHIIDIYACALDQTGLLEM
KCCPNYTGGYMVMADSFNTSLFKQTFQRVFTKDVQGSFKMAFNATLEVKTSREIKVSGAI
GPCVSLHAKGPCVSENEIGTGGTSQWKICGLDPSTTLALYFEVVNQHNAPIPQGGRGAIQ
FVTQYQHSSGQRRIRVTTTARNWADAQSQIQSIAASFDQEAAAILMARLAVYRAETEEGP
DVLRWLDRQLIRLCQKFGDYHKDDPNSFRFSETFSLYPQFMFHLRRSPFLQVFNNSPDES
SYYRHQFNRQDLTQALIMVQPVLYAYSFSGPPEPVLLDSSSILPDRILLMDTFFQILIYH
GETVAQWRKAGYQDLSEYENFRHLLQAPVDDAQELLHARFPMPRYIDTEHGGSQARFLLS
KVNPSQTHNNMYAYGQESGAPILTDDVSLQVFMDHLKKLAVSSAA
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccttcccagagttcatctctcagaacgaggaccgggacggggtccggctcagc
tggaacgtctggccctcgtcccgtctggaggcgacccggctggtggtccctctggcggcg
ctgctgtcccccctgagagagagagaggacctgccccccatccagtatgaacctgtgctc
tgcagcagggccacatgcagagcagtgctgaaccccctgtgtcaggtggactacagagcc
aagctgtgggcctgtaacttctgctaccagaggaaccagttccctccatcctacgcgggg
atctcggaggtgaaccagccggccgagctgctgcctcagttctccaccatcgagtacgtg
gtgcagcgcgggccccagatgcccctggtgttcctctacgtggtggacacctgtctggag
gaggaggacctgcaggctctgaaggagagcctccagatgtctctctctctgctgcccccc
gcctctctggtgggcctcatcaccttcggacgcatggtgcaggtccacgagctgcagggc
cctgaaggcatcgccaagagctacgtgttccggggggccaaggacctgagcgccaagcag
ctgcaggagatgctcggtctgaccaaacctgcagcggctcagacgagaggagcccagccc
gcccccagcccgctctgcaacaggttcctgcagccggtgcagaaggtggacatgaccctc
actgacctgctgggggagctgcagagagacccctggcccgtcactcaggggaagagacct
ctgaggtcgctgggggtcgccatgtccatcgctgtggggctgctggagtgcaccttccca
aacacaggggcccgcatcatgaccttcctggggggtccggccactcaggggcccggcatg
gtggtgggggacgagctgaagacccccatcaggtcctggcacgacctggagaaggacaac
gccaagttcatgaagaaggccaccaagcactacgaggctctggctaacagagcgtgtgct
aacggtcacatcatcgatatctacgcctgcgctctggatcagaccggcctgctggagatg
aagtgctgccccaactacaccgggggctacatggtgatggcggactccttcaacacgtct
ctcttcaagcagaccttccagagagttttcactaaagacgtgcagggatccttcaagatg
gccttcaacgccacgctggaggtcaagacctccagagagatcaaagtctccggagccatc
gggccctgtgtgtctctgcacgctaaaggaccctgcgtctcagagaacgagatcgggaca
ggaggaaccagtcagtggaagatctgcggtctggaccccagcaccactctggctctgtac
ttcgaggtggtcaaccagcacaacgctccgatccctcagggcggccggggggcgatccag
ttcgtcactcagtaccaacactcatctggacagagacgcatcagagtgaccaccaccgcc
aggaactgggcggacgctcagtctcagatccagagcatcgccgcgtccttcgaccaggag
gcggcggccatcttgatggctcggctggccgtgtaccgggcggagacggaggaggggccg
gacgtcctgcgctggctggaccgccagctcatcagactgtgccagaagtttggagattac
cacaaagacgaccccaactccttcaggttctctgagaccttctctctctaccctcagttc
atgttccacctgcggcgctcccccttcctccaggtgttcaacaacagtcctgatgagagc
tcatattacagacatcagttcaacagacaagacctgacgcaggcgctcatcatggtgcag
ccggtgctctacgcctattcattcagtgggccccctgagccggtgctgttggacagcagc
agcatcctgcctgacagaatcctgctgatggacaccttcttccagatcctcatctaccac
ggagagacggtggctcagtggaggaaggcgggctatcaggacttgtcggagtacgagaac
ttccggcacctcctccaggctccggtggacgacgctcaggagctgcttcacgctcgcttc
cccatgccgagatacatcgacacggagcacggaggcagccaggcccggttcctgctctcc
aaagtgaacccctctcagacgcacaacaacatgtacgcctatggacaggagtctggagct
cccatcctgacagacgacgtcagtctgcaggtgttcatggatcacctgaagaaactggct
gtttccagcgctgcgtga
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