Trematomus bernacchii (emerald rockcod): 117495135
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Entry
117495135 CDS
T09643
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117495135 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tben03400
]
117495135 (rad54l)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
117495135 (rad54l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
Rad54_N
SWI2_SNF2
Zn_ribbon_InsA
Motif
Other DBs
NCBI-GeneID:
117495135
NCBI-ProteinID:
XP_034002133
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MRRSLAPSQVAKRKQGDSCDDEEWTCNTDKKRKSDNEKRESHISPFRKPLTQLNKLPECL
DGDKHEAFIRSILSKPFKIPIQNYTGALGIRALGLKRAGVRKALHDPFAEDALVLYEPPI
LSAHDLIKADKDKLQIHVVVDPVLGKVLRPHQREGVKFLWECVTGRRIPGSYGCIMADEM
GLGKTLQCISLMWTMLRQSPDVKPEIDKVIVVSPSSLVRNWYNEIAKWLGGRLSPVAIDG
GSKEEIDRKLVNFVSQHGLRVATPILIISYETFRLHTAVLHKGKVGLVICDEGHRLKNSD
NQTYQALNAMSAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILRGR
DAEASDKDRQIGEERLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQSELYK
CFLKQAKPIDTLQQGKISFSSLSSITTLKKLCNHPALIYEKCLQRDEGFEGALELFPSGY
SAKAVEPQLSGKMLVLDYILAMTRSTTSDKVVLVSNYTQTLDLFEKLCRSRRYLYVRLDG
TMSIKKRAKVVEKFNTPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMA
RVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELRELF
NLNEETISDTHDRFRCRRCVNGREVRPPAEASDCTSDLSQWNHCSDKKGLRDQVLKASWD
AAVSFVFHQRSHEDQKGVV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggagtctggctcccagtcaggttgctaaacgcaagcaaggagattcatgtgac
gatgaggaatggacatgtaacactgacaaaaaaagaaaaagtgataatgagaagagagaa
agccacatttctccattcagaaagcctctgacacagctgaacaaactgcctgaatgtttg
gatggtgacaagcatgaggcatttattcgaagcatcctctccaagccatttaaaattcct
attcaaaattatacaggcgcgctgggaatcagggcacttggtctaaagcgcgcaggagta
aggaaagctcttcacgatcccttcgcagaagacgctttggttctttatgaacccccgatt
ctgagcgctcatgacctgatcaaagctgacaaagataaactacaaatccatgttgttgtg
gatccagttttaggaaaagtactccgaccccatcagagagagggggtgaagttcctgtgg
gagtgtgtgacgggaaggcgcatccccgggtcgtatggctgcatcatggcagatgagatg
ggcctggggaagacgttgcagtgtatcagcctcatgtggaccatgctgcgccaaagccct
gatgtaaagcccgagatagacaaggtcattgtggtttcaccgtccagtctcgtacgtaac
tggtacaatgaaatagcaaagtggctgggaggacgcctctcaccagtggccatcgacgga
ggttcaaaggaggagatcgatagaaaactagtgaactttgtctctcaacatggtttgaga
gtagccaccccgatcctgattatttcctacgagacattccgactgcacaccgcggttctg
cacaagggaaaagttggacttgtcatctgtgacgagggtcatcggctgaagaactctgac
aaccagacctaccaggcgctgaatgccatgagtgcccagcggagggtgctgatatcaggc
accccaatccagaacgacctactagagtacttcagcttggtccactttgtaaatgctggg
atcctaggtacagcccaggagtttaaaaagcgatttgagcttcccatcctcaggggtcga
gatgcagaagccagtgataaagacagacagattggagaggaaaggctcaaggagctgatc
agcatcgtcaacagatgcttgatcaggagaacatctgacatcttgtctaaatatcttcct
gtgaaaattgagcaggttgtgtgttgcaggctgactcctttgcagtcagaactctacaag
tgtttcctgaaacaggcaaagcccattgacacattacagcagggcaaaataagtttctcc
tccctgtcttccatcaccacacttaagaaactgtgcaatcacccagctctgatctatgag
aagtgtctgcagagggatgagggctttgaaggggcgcttgaactctttccctctggctac
tccgctaaagctgtggagcctcagctctctgggaaaatgctggttcttgattacattctg
gcaatgacaaggtctacaactagtgacaaggtggtgctcgtttccaactacactcaaaca
ctggacctcttcgagaagctctgcagatctagaagatacctctatgtgcgactggatgga
acaatgtccatcaagaaaagggcgaaagttgtggaaaaattcaacactccgtctaatcca
gagttcatcttcatgctgagcagcaaggctggaggatgtggcctgaatctaattggtgct
aatcgcttggttatgtttgatcctgactggaatccagccaatgatgagcaggcgatggcg
cgggtgtggagagacggccagaagaagacctgctacatctaccgactgctctccacgggg
acgattgaggagaagatccttcagaggcaggcacataagaaggccctgagcagctgtgtg
gtggacgaggagcaggacgtggagcgccacttctctctgggcgagctccgagaactcttc
aatctgaacgaggagaccatcagtgacacacatgacaggtttcgctgtcgccgctgtgtg
aacggcagggaggtccggcctcctgcagaggcctccgactgcaccagtgacctctcccag
tggaaccactgctccgacaagaagggcctgagggaccaggtgttgaaagcctcctgggac
gctgccgtctcatttgtcttccaccagcgctctcatgaggaccagaagggtgtagtatag
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