Trematomus bernacchii (emerald rockcod): 117495896
Help
Entry
117495896 CDS
T09643
Symbol
si:ch211-129c21.1
Name
(RefSeq) LOW QUALITY PROTEIN: semaphorin-4E
KO
K06521
semaphorin 4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tben04090
]
117495896 (si:ch211-129c21.1)
CD molecules [BR:
tben04090
]
Proteins
117495896 (si:ch211-129c21.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
PSI
ig
Ig_2
Ig_3
I-set
V-set_CD47
PSI_integrin
Motif
Other DBs
NCBI-GeneID:
117495896
NCBI-ProteinID:
XP_034003372
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MSLLSALSIVCGLMLHVSVNALDTQYCVPRKTIPYQNELKLFREEGIFNYSTMLMRDDLG
VLLLGAREAVYALDINNISVRKAAVYWRVTEEKQRECTYKGKHAEVDCRNYIRTLHRVND
TTMYVCGTNAFSPTCDYMTFVKGQLRLEGKQEEGKGKCPFDPFQRYSSLMVGNDLYSATS
INFLGSEPVVLRSSDLALRTEFKSSWLSEPNFVYMDFVGESFNSLDGDDDKVYMFFSENA
MEYDFSSKVTVSRVARVCKGDMGGQRTLQRKWTSFLKARLDCSLPEPSLPPIVQDVFLLK
NENWKESVFYAVFTPQSGLSEVSAVCAYSVSSIRDIFNEGKFKTPVAVETSHVKWVMYTG
EVPVPRPGACINSVARKMGMNRSLDLPDKTLQFIRDRPLMDEAVQPQTGGPLLVKRGALL
TRIVVDSVLALDRQRYAVMFIGTENGYIQKAVNYAGEMFIIEEIQLYKTSVPISTLRLSS
SKGQLYAGSEFGAIQMPVSNCSRYETCVDCILARDPYCAWDLPEEHCCSVDSVSYIETAI
QSLKEGDLSQCSPPDPVAAVDFTLVPGNNIQLPCQLHSNLAQVVWRFAHHTLHSDNKYYI
YSRGLLVLQASESDAGLYTCDSVELINGRPYNRTVAVYQLQLHSDAGVGESSTPSNEVTD
SSSSIYNVITAAPEPNSGMEDPLTPQNQSETSKVTGLEVAVALLSLLCLCLMGVIFCIWN
QGRFGCFNFAKRPSESEVKRQSAEYMHIPSRTSEIKLLGPESGRPCSANNNHSVVDFKGN
GEHHFTPMANISSLDGLGYINDESEI
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttctctcagctctgagcatcgtctgtggattgatgctccatgtttcagttaat
gcactcgacactcaatactgtgtcccacgaaagactatcccctaccagaacgagctgaag
ttgttcagagaagaggggatcttcaactactccactatgctaatgagagacgacctgggt
gtgctgctgctgggggccagagaggctgtgtatgctctggacatcaacaacatttctgtc
cgaaaggctgcggtgtactggcgagttacagaggagaaacagagggagtgcacatacaaa
ggaaaacatgctgaggtggattgccgtaactacattcgaaccctgcacagagtcaatgac
actacgatgtatgtgtgtggcacgaatgcttttagccccacctgtgattacatgacgttt
gttaaaggacagctgaggctggagggaaagcaggaggagggaaaagggaagtgtcctttt
gatcccttccagagatactcctccctcatggtcggaaatgacctgtattctgcgacatcc
atcaacttcttgggctctgagccggtggttctgcgcagctcggacttggctctccgcact
gagtttaagagctcatggctcagtgagccaaactttgtctacatggactttgtgggggag
agctttaatagtcttgatggtgatgatgacaaggtgtacatgttcttcagtgagaacgcc
atggagtacgacttctccagcaaagtcactgtgtctcgagtggcccgtgtctgcaagggg
gatatgggcggccagcggacactgcagaggaaatggacgtcgttcctgaaagcccgtctg
gattgttccctccctgaacccagcctgccccccattgtccaggatgtcttcctgctgaag
aacgagaactggaaggagagcgtcttctacgctgtcttcactccgcagtcgggcttgtcc
gaggtatctgcggtatgtgcatatagtgtgtcttccattcgagatattttcaacgagggc
aagtttaagacacctgtcgctgtggagacatctcacgtgaagtgggtgatgtacactgga
gaggtgccagtccccagaccgggagcatgcatcaatagtgtggcacgtaaaatgggcatg
aatcgctctctggaccttcctgacaaaaccctccagttcatcagggaccgccccctcatg
gacgaggctgtccaaccgcagacgggggggccgctgctggtgaagaggggagctttgctg
actcggatcgtagtggacagtgtgttggcgctggaccgacagagatatgcagtcatgttc
attggcactgaaaacggttacatccagaaggctgtcaactacgcaggagagatgttcatc
attgaggaaattcaactgtacaaaacctcggtgcctatcagcaccctgcgcctctcatcc
agcaagggccaactgtatgcaggttcagagtttggtgccatccagatgccggtcagtaac
tgcagccgctatgagacttgtgtggactgcatcctggcccgggacccttactgtgcctgg
gacttgccagaagagcattgctgctcagtcgacagtgtgtcctacattgaaactgcaata
cagagtctgaaggagggagacctctctcaatgttctcctccagatccagtggcagccgtg
gactttaccctggttccaggaaacaacatccagctgccgtgccagctccactccaacttg
gcgcaggtcgtgtggcgattcgctcaccatacacttcactccgacaacaaatactacatc
tacagccggggcctcctcgtcctgcaggcctctgaatcggacgcgggcctgtacacatgt
gactcagtagagctgatcaatgggagaccatacaaccggactgtggcggtttatcagttg
cagctccactctgatgcaggagtgggggagagctctactcctagcaatgaggtgacagat
tcctcatcctctatttacaatgtgattacggctgcaccggagccaaactcgggcatggag
gacccgttgaccccgcagaaccaaagcgagaccagcaaggtgactggtttagaggtggcc
gtggctctgctgtcactgctctgtctctgcctgatgggggtcatattttgcatctggaat
cagggacgttttggatgcttcaattttgcgaagcgcccaagtgaaagcgaggtgaaaagg
cagtcagccgaatacatgcacatccccagcagaacttcagagattaagctcctggggcct
gagtctgggagaccttgcagtgccaataataatcactctgttgttgacttcaaaggcaac
ggggagcaccacttcacgcctatggccaacatttcaagtctggatggtctgggatacata
aatgatgagtcagagatttga
DBGET
integrated database retrieval system
