Trematomus bernacchii (emerald rockcod): 117497233
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Entry
117497233 CDS
T09643
Symbol
snx33
Name
(RefSeq) sorting nexin-33
KO
K17923
sorting nexin-9/18/33
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117497233 (snx33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117497233 (snx33)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117497233 (snx33)
Membrane trafficking [BR:
tben04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
117497233 (snx33)
Macropinocytosis
Sorting nexins
117497233 (snx33)
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117497233 (snx33)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_9
SH3_1
SH3_2
Vps5
Motif
Other DBs
NCBI-GeneID:
117497233
NCBI-ProteinID:
XP_034005016
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MSAKAKALYTFQSENKEEISIQENEELVIFDENSVDGWFQGENSRGEKGLFPASYVEVIR
TRSNSNVTNCSISPAGSLGNDSSFLSSSTPNTSLTLQSNIYDNDEDDDDDWDDWDDRSTV
VDDGDHRSPGANGHPNHSPLSNNPNVHYRAKPHMERQDSISSSRKGSVVGRNLNRFSSFV
RSGVEAFVLGDVPMMAKIAESYTIEMGQLGPVWQASPKPFSCSVEDPTKQTKFKGIKTYI
SYRVTPSHIGRAVYRRYKHFDWLYNRLLHKFTVISVPHLPEKQATGRFEEDFIEKRKRRL
ILWMNHMTSHPVLSQYEGLEHFLMCTDDKQWKLGKRRQEKDEMVGAHFMLTLQIPNEHQD
LQDVEERIDTFKAFAKKMDDSVLQLTHVASELVRKHLGGFRKEFQRLGNSFQSISHAFTL
DPPNSSENLNKAISHTGRTYENIGELFAEQPKNDLFLMLDKLSLYQGLLANFPDIIHLQK
GAFAKVKESQRMSDEGKMDQGEADGIRKRCRTVGFALQAEMSHFHQQREVDFKQMMQAYL
TEQIAFYQRVVQQLERTLRMYDCL
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgaaagccaaagcactctacactttccaaagtgaaaacaaagaggagatcagt
atccaggagaatgaggagctggttatcttcgacgagaactcggtggacggctggtttcag
ggggagaacagccgaggggagaagggtctcttcccagcatcctatgtggaagttattcgc
actcgctcaaactctaacgtgacaaactgctccatcagcccagcagggtctttgggaaat
gattcctcctttttatcatcatcaaccccaaacacctctttgactttgcaatcgaatatc
tacgacaatgatgaagatgatgatgatgactgggacgactgggatgacaggtcgacagtt
gtggacgatggtgaccacaggagccctggggccaatggacaccccaatcacagcccactg
tccaacaatcccaacgtgcactaccgggccaaaccacacatggagagacaggacagcatc
tccagctcgaggaaaggcagcgtggtgggcaggaacttgaacaggttttccagctttgtc
cgctcaggggtggaagcgtttgtgttgggggatgtacccatgatggcgaagatagctgag
tcatacaccattgagatgggtcaattggggcccgtttggcaggcgagcccaaagcctttc
tcctgctctgtcgaagaccccacaaaacagacaaagttcaagggtatcaagacgtacatt
tcctaccgtgtcacgccgagccacatagggcgtgccgtgtacagacgctacaaacatttt
gactggctgtacaaccgcttactgcacaagttcactgtgatctccgtgcctcacctgcct
gagaagcaggccacggggcgatttgaggaagacttcatcgagaagcgcaagaggcgactg
atactgtggatgaaccacatgaccagtcacccagtactctcccagtatgaaggcttagag
cactttctaatgtgtactgatgacaagcagtggaaactgggcaagaggcggcaagaaaag
gacgagatggttggtgctcatttcatgctgacccttcagatccccaacgagcaccaggac
cttcaggatgtagaggagcgcatcgacaccttcaaggcctttgctaagaaaatggatgac
agcgttttgcagctcacacatgttgcttcggagctggttcgtaaacacctgggtgggttc
aggaaggagttccagcggctgggaaattctttccaatctatcagccatgcgttcacgctg
gaccctcccaacagctcagagaatctcaacaaagccatctcccatacgggccgcacctac
gagaacattggagagctgttcgcagagcaacctaagaatgacctcttccttatgctggac
aagctgtccctctaccaaggcctgctcgccaacttcccggacattattcatctacagaaa
ggtgccttcgccaaggtgaaggagagccagcggatgagtgacgaggggaagatggaccag
ggcgaggcagatggcatcaggaaacgctgccggacggttggctttgccctgcaggcggag
atgagccacttccaccagcagcgagaggtggacttcaaacagatgatgcaggcctacctc
acggagcagatagccttttaccagcgtgttgtgcagcaactggagcgcaccctgcgcatg
tacgactgtctgtag
DBGET
integrated database retrieval system
