Trematomus bernacchii (emerald rockcod): 117498775
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Entry
117498775 CDS
T09643
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tben04054
]
117498775
Pattern recognition receptors [BR:
tben04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117498775
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
LRR_6
FISNA
PYRIN
NOD2_WH
PRY
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
117498775
NCBI-ProteinID:
XP_034006823
LinkDB
All DBs
Position
Unknown
AA seq
1253 aa
AA seq
DB search
MSSVSVSRPEEHSAGGGSAMDQSEDREEEAPLSKGSGEHDSQTKAQSPEQTPHSAGPGPG
PGPGPGPGPGPSSVSSNQLTARDQKQGEKMETPRKVLLRTLQSLGGNDFKEFKWHLEEEV
QGFPGIPKSHLEKADRMDTVDLMLLYYGINTIKVTREVLGEINQNYLEEKLSKIPSVPND
ILTKCQGELKSNLKETFENIKFMEKSEPLNEIYTEIYITRGDTTEVNKEHEIRQIEQAST
KPDRPETTIRQEDLFKGSTERGKPIRAVMTKGVAGIGKTVLTQKFTLDWAEGKANQDIQF
TFPFTFRELNVVRENKYSLVELVHHFFSETRDAGICRFDQFSVVFIFDGLDECRPPLKFH
NTEILTDVTESTSVDVLLTNLIRGKLVPSARLWITTRPAAANQIPPECVDMMTEVRGFTD
PQKEEYFRKRFRDQEQAGTIISHIKTSRSLHIMCHIPVFCWISASVLEDMLNTGGGELPK
TLTEMYIHFLVIQSKVKNVKYDGGTETDQHWSPETRMMMESLGKLAFEQLQKGNLIFYES
NLRECGIDIRAASVYSGVFTQVFREVRGTYKDKVFCFVHLSVQEFLAALHVHLTFINSRD
NLMAPWWSKVFRQKPKHLYQSAVHKALHSSNGHLDLFLRFLLGLSMETNQTLLHDLLTQT
GSGSQTIQKTVKYIKKKIRKHPSPEKSINLFHCLNELNDHSLVEEIQQYLRSGSLSTEDL
SPAQWSALVFILLSSEEDLDVFDLQKYSASEEALLRLLPVVKAARKALLSGCNLSERSCA
ALSSVLSSQSSSLRDLDLSDNDLQDSGVKPLSAGLESSHCELETLRLTGCNLSERSCEAL
SSVLSSQSSSLRDLDLSDNDLPDSGVKLLSAGLESPHCVLETLRLTGCNLSERSCEALSS
ALSSQSSSLRDLDLSKNDLQDSGVKLVSAGLESPHCTLETLRLTGCNLSERSCEALSSVL
SSQSSSLRELDLSNNDLKDSGVKLLSAGLESPNCELETLSLSGCLVTEEGCVSLASALSS
NPSHLRELDLSYNHPGDSGEKLLSAGLEDPLWRLDTLRLDHGGEQRLKPGLRKYSCELTL
DSNTVFRYLKLSDNNRTVTPVWEEPQPYPDHPDRFDPWPQLMCRAALTGRCYWEVEWRGR
VHISVTYRGISRKGNREDCEFGENDQSWSLDCSHDGGYSYSVHHNKRRTHTSSSPSRRIA
VYLDHAAGSLSFYRVSSRDTLTHLHTFRATFTEPLYAGFRLWPHGSSVSLCPL
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgtttctgtgagtagacctgaagagcattcagcaggtgggggctctgctatg
gatcagagtgaggacagagaggaggaagcccccctctctaaaggctctggggaacatgac
agccagaccaaagctcagagcccagagcaaacaccacactcagctggacctggacctgga
cctggacctggacccggacctggacctggacccagctctgtgtccagtaaccagcttact
gccagagaccagaaacagggagaaaagatggagacaccaagaaaagtcctattaagaact
ttacaaagtttggggggaaatgactttaaagagttcaagtggcacctggaggaggaggtc
caaggattcccaggaatcccaaagagtcatctagagaaagcagaccggatggacacagtg
gatctgatgcttctgtactacggcataaacaccattaaagtgaccagagaagttttgggg
gagataaatcagaattatctagaagagaaattatcaaaaatcccatcagtacctaacgat
attctcacaaagtgccaaggtgaactcaaatcaaacctgaaggaaacatttgaaaatatc
aaatttatggaaaaatctgaaccactaaatgaaatctacacggagatctacatcaccagg
ggagacaccacagaggtcaacaaggaacatgagatcagacagatcgaacaagcatccact
aaaccagacagaccagaaacaaccatcagacaagaagacctctttaaaggctcaactgaa
agaggtaaaccaatcagagcagtgatgacaaagggagtggctggcattgggaaaacagtc
ttaacacagaagttcactctggactgggctgaaggcaaagccaaccaggacatccagttc
acatttccattcactttcagagagctgaatgtggtgagagagaacaagtacagcttggtg
gaacttgttcatcacttcttctctgaaaccagagacgcaggaatctgcaggtttgatcag
ttctcggtcgtgttcatctttgacggtctggatgagtgtcgacctcctctgaaattccac
aacactgagatcctgactgatgtgacagagtccacctcagtggatgtgctgctgacaaac
ctcatcagggggaagctggttccctctgctcgcctctggataaccacacgacctgcagca
gccaatcagatccctcctgagtgtgtggacatgatgacagaggtccgagggttcactgac
ccacagaaggaggagtacttcaggaagaggttcagagatcaggagcaggccggcaccatc
atctcccacatcaagacctcccgaagcctccacatcatgtgccacatcccagtcttctgc
tggatctctgcttcagttctggaggacatgttgaacactgggggaggagagctgcccaag
accctgactgagatgtacatccacttcctggtgattcagtccaaagtgaagaacgtcaag
tatgatggaggaactgagacagatcaacactggagtccagagaccaggatgatgatggag
tctctgggaaaactggcttttgagcagctgcagaaaggcaacctgatcttctatgagtcc
aacctgagagagtgtggcatcgatatcagagcagcctcagtgtactcaggagtgttcaca
caggtctttagagaggtgagaggaacgtacaaggacaaggtgttctgcttcgtccatctg
agcgttcaggagtttctggctgctcttcatgtccatctgaccttcatcaactccagagac
aacctgatggccccctggtggtctaaagtcttcagacaaaaacctaaacatctctaccag
agtgctgtgcacaaggccttacatagttcaaacggacacctggacttgttcctccgcttc
ctcctgggtctttcaatggagacaaatcagaccttattacacgacctgctgacacagaca
ggaagtggctcacagaccatccagaaaacagtgaaatacatcaagaaaaagataagaaag
cacccgtctccggagaaaagcatcaacctgttccactgtctgaatgaactgaatgatcat
tctctggtggaggagatccaacagtacctgagatcaggaagtctctccacagaggatctg
tctcctgctcagtggtcggctctggtcttcatcttactgtcatcagaagaagatctggac
gtgtttgacctgcagaaatactctgcttcagaggaggctcttctgaggctgctgccagtg
gtcaaagccgccaggaaagctctgctgagtggctgcaacctgtcagagagaagctgtgca
gctctgtcctcagtcctcagctcccagtcctctagtctgagagatctggacctgagtgac
aacgacctgcaggattcaggagtgaagcctctgtctgctggactggagagttcacactgt
gaactggagactctcaggttaactggctgtaacctgtcagaaagaagctgtgaagctctg
tcctcagtcctcagctcccagtcctctagtctgagagatctggacctgagtgacaacgac
ctgccggattcaggagtgaagctgctgtctgctggactggagagtccacactgtgtactg
gagactctcaggttaactggctgcaacctgtcagagagaagctgtgaagctctgtcctca
gccctcagctcccagtcctctagtctgagagatctggacctgagtaagaacgacctgcaa
gactcaggagtgaagctggtatctgctggactggagagtccgcactgtactctggagact
ctcaggttaactggctgtaacctgtcagagagaagctgtgaagctctgtcctcagtcctc
agctcccagtcctctagtctgagagagctggacctgagtaacaacgacctgaaggattca
ggagtgaaactgctgtctgctggactggagagtccaaactgtgaactggagactctcagt
ctgtcaggctgtctggtcacagaggaaggctgtgtttctctggcttcagctctgagctcc
aacccctcccatctgagagagctggacctgagctacaatcatccaggagactcaggagag
aagctgctgtctgctggactggaggatccactctggagactggacactctcaggctggac
catggtggagagcagaggttaaaaccaggtctgaggaagtattcctgtgaactcaccctg
gactcaaacacagtattcagatacctcaaactttctgacaacaacaggacggtgacacct
gtgtgggaggagccacagccatatcctgatcatccagacaggtttgacccctggcctcag
ctgatgtgtagagcagctctgactggtcgctgttactgggaggtcgagtggagaggaaga
gttcatatatcagtgacttacagaggaatcagcaggaaaggaaacagagaggactgtgaa
tttggagagaatgatcagtcctggagtctggactgctctcatgatggtggttactcttac
tctgtccatcacaataagagaagaacacacacctcctcctccccctctcgtagaatagca
gtgtatctggatcatgctgctggctctctctccttctacagagtctcctctagagacaca
ctgacccacctccacaccttcagagccacattcactgaacctctctacgctgggtttagg
ctctggcctcatggttcctcagtgtctctgtgtcctctgtag
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integrated database retrieval system
