Trematomus bernacchii (emerald rockcod): 117499673
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Entry
117499673 CDS
T09643
Symbol
capn8
Name
(RefSeq) calpain-8
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04141
Protein processing in endoplasmic reticulum
tben04210
Apoptosis
tben04217
Necroptosis
tben04218
Cellular senescence
tben04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117499673 (capn8)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117499673 (capn8)
04217 Necroptosis
117499673 (capn8)
04218 Cellular senescence
117499673 (capn8)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117499673 (capn8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117499673 (capn8)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
117499673 (capn8)
Peptidases and inhibitors [BR:
tben01002
]
Cysteine peptidases
Family C2: calpain family
117499673 (capn8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
117499673
NCBI-ProteinID:
XP_034008114
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MTSTADRLAHQKKREEGIGTNQKAVKFSQQDYETLRQQCLERGGLFEDNCFPAESKSLGF
NELGPYSAKTRGVVWKRPTELCSNPKFIDDGATRTDICQGALGDCWLLAAIASLTLDQRI
LARVVPHGQNFTERYAGIFHFQFWQFGEWVDVVVDDRLPTREGKLLFVHSAEGSEFWSAL
LEKAYAKVHGCYEALSGGNTIEGFEDFTGGIAEVYTLNKAPPKLFQIIKKALGLGSLLGC
SIDITNAYETEAVTALKLVKGHAYSVTGAEEVNYLGRQVELVRIRNPWGQVEWTGSWSDG
SSEWNHVSKEEKSKLNNKAEDGEFWMSYSDFIRQFSTLEICNLTPDTIMSDDVGHWNHYQ
FEGMWRVGSTAGGCRNNQATFSSNPQYVVRLEDVDDDPLDGEDGCTFLVGLMQKDGRRKK
KLNRNLETIGYAIYKVPDELKGRSNVHLGPDVLLRQRAVAMSSTFINTREVCDRFKLPPG
EYAIVPSTFQPHKNGSFVLRVFSEKQAATSPLEEDIDAEIEEEEVSEDDVDPHFREVFKQ
IAGDDMEVSIFELVKMLNNIVSHRSDIKTDGFSLETGRLIVSLLDKDESAKLGLMEFHLL
WGKIQKYLDIFKNHDTDNSGTMSSHEMRGAATQAGFHINSAVLQSIVSRYADAQYAIDFD
SFVGCLIKLEMLFKMFKSLERADAGNIELDMQQWLCLAIY
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgacttccactgcagatcgtctggcccatcagaagaagagggaggaaggcattggcacc
aaccagaaagcagtgaagttctcccagcaggactatgagactctgcggcagcagtgtctg
gagcgtggaggcctgtttgaggacaactgttttcctgctgagagcaaatcactgggcttc
aatgagctgggaccatactcagccaagaccaggggcgtagtttggaagaggccaacggag
ctgtgctcaaatccaaagttcattgatgatggagccacaaggacggacatttgccaagga
gctctgggtgactgctggcttctggctgcaatagcctctctgactctggaccagcggatc
ctggctcgtgtggtgccccatggacagaacttcactgaaagatatgccgggatatttcac
ttccagttctggcagtttggtgagtgggtggatgtggtggtcgatgaccgtttacccacc
agagaaggaaagctgctgtttgttcactcagcggagggatctgagttttggagcgcactg
ctagagaaagcctatgctaaggtgcatggctgctatgaagccctgtctggaggaaacact
attgagggttttgaggatttcacaggagggattgctgaagtttacaccttaaacaaagct
ccaccgaagctcttccaaatcataaagaaagctctggggctgggctcactgctgggctgc
tccattgatatcaccaatgcctatgagacagaggcggttacagctcttaaacttgtcaag
gggcatgcatactcagtgactggtgcggaggaggttaattatctaggcaggcaggttgag
ctggtccgcatcaggaacccatggggtcaggtggagtggactgggtcttggagtgatgga
tccagcgaatggaaccacgtcagtaaagaggagaagtcaaagttgaacaataaggctgag
gatggagagttctggatgtcctattcagacttcatcaggcagttctccacgctggagatc
tgtaacttgaccccagacacgatcatgagtgacgatgtgggccactggaaccactaccag
tttgaagggatgtggagggtgggctccactgctggcggctgccgcaataaccaagccaca
ttctcgtccaacccacagtatgtggtgcgtctggaggatgtggatgacgaccccctggat
ggggaggatggctgcaccttcctggtcgggttgatgcaaaaggacggacgacggaaaaag
aagcttaaccgcaaccttgaaaccattggctatgccatttataaggtcccagatgagctc
aaaggccgcagcaatgttcacctgggtccagatgtcctgctgcgacagagagcagtggcc
atgagcagcaccttcatcaacacacgagaggtgtgcgaccgcttcaaacttcctccagga
gaatatgccatagttccctcgaccttccagccgcacaagaacggcagctttgttctcagg
gtcttctcagagaaacaggctgcaaccagtccactggaggaggacattgatgctgaaatc
gaggaggaggaggtatctgaggatgatgtggatcctcattttagagaggtcttcaagcag
attgctggcgatgatatggaggtatctatctttgaactggttaaaatgttgaacaacatt
gtctctcaccggtctgacatcaagacagatggcttcagccttgagacaggtcgccttatc
gtcagtctgctggataaagatgaaagtgccaagctgggactgatggaattccacttgctt
tggggaaaaatccaaaaatacctggatatcttcaagaatcatgacacagacaattcgggc
accatgagctcccacgagatgagaggcgctgccactcaagcaggtttccacatcaacagt
gctgtgctgcaatccattgtcagtcgttacgcggatgctcagtatgccatagactttgac
agctttgtaggctgtctcattaaactggaaatgctcttcaaaatgtttaagtctctggag
agagctgacgcaggaaatatcgagctggacatgcaacagtggctgtgcctggcgatctac
taa
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