Trematomus bernacchii (emerald rockcod): 117499889
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Entry
117499889 CDS
T09643
Symbol
capn1a
Name
(RefSeq) calpain 1, (mu/I) large subunit a
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04141
Protein processing in endoplasmic reticulum
tben04210
Apoptosis
tben04217
Necroptosis
tben04218
Cellular senescence
tben04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117499889 (capn1a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117499889 (capn1a)
04217 Necroptosis
117499889 (capn1a)
04218 Cellular senescence
117499889 (capn1a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117499889 (capn1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117499889 (capn1a)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
117499889 (capn1a)
Peptidases and inhibitors [BR:
tben01002
]
Cysteine peptidases
Family C2: calpain family
117499889 (capn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
117499889
NCBI-ProteinID:
XP_034008445
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MYATGMSAVIQANRLRAEGMGTNEHAVPFSNQDYEALKQQCVESGCLFEDDCFPAEPPSL
GFKELAPYSSKTRDVEWIRPTDLTDDPQFIVGGASRTDICQGALGDCWLLAAIASLTLNE
RLLHRVVPHGQSFQDDYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELMFVHSAEGNEFWS
ALLEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELRKAPRDLHRIIAKALERGSLL
GCSIDITSAFDMEAVTFKKLVKGHAYSLTGLKEVDYQGNMERLIRIRNPWGQVEWTGAWS
DNSPEWDEIDSSEREDLHLKMEDGEFWMSFNEFKRQFSRLEICNLTADALSEDGLSHWNT
TKFYGAWRRGSTAGGCRNNPNTFWINPQYKITLLEEDDDPEDDEVACSFLVALMQKDRRK
YRRQGQDTHTIGFALYEIPEEYRGCTNVHLKKDFFLTHSSCARSETFINLREVSTRLRLP
PGEYLIVPSTFEASQEADFVLRVFTEKQSETEELDDEISADFGEEEEVTEDDIDDSFKSM
FAQLAGEDMEISVHELRTILNRVVTRHKDLKTDGFSMESCRSMVNLMDKDGSARLGLVEF
QILWNKIRKWLVIFRDFDLDKSGAMSSYEIRLAVEGAGFKLNNKLNQILVARYAENEMVD
FDNFICCLVKLEAMFRSFQHFDKDGSGQAEMNVTEWLYLTMCG
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcaactgggatgtccgctgtcatacaggccaacaggctgcgagcagaaggcatg
ggcaccaatgagcacgctgtgcccttctccaaccaggactacgaggctctgaagcagcag
tgtgtggagtccggctgcctgtttgaggacgactgtttccccgctgagcctccatccctg
ggcttcaaggagctcgccccctattcctccaaaaccagggatgtggagtggatacggccc
acagacctgactgatgaccctcagttcattgtgggcggtgcctccaggaccgacatctgt
cagggagcgctgggtgattgctggctcttagcagccatcgcgtctctcaccctgaatgag
aggcttcttcaccgggtcgtcccacatggacagtcctttcaagacgactacgctggaata
ttccactttcagttctggcagtttggcgagtgggtagatgttgtgattgatgacagattg
cctgtcaaagatggagagctgatgttcgtccattctgctgagggcaatgaattctggagt
gcactcctagagaaggcttacgcaaagctgaatggatcctacgaggctctgtctggagga
agcaccactgaggggtttgaggacttcacaggtggtgtgtctgagatgtacgagctgcgc
aaggcccccagagatctgcacaggatcatcgctaaggccctggagagaggctctctgctg
ggctgctccatcgatatcaccagtgccttcgacatggaggctgttacattcaagaagctt
gtgaagggccatgcctactcactcaccggactgaaggaggttgattaccaaggcaacatg
gagcgcctaatccggatacgtaacccttggggacaggtggagtggactggtgcctggagt
gacaattcccctgaatgggatgagattgactcttctgaacgagaggacctgcatcttaag
atggaagatggggagttttggatgtccttcaatgagttcaagaggcagttttctcggcta
gagatctgtaacttgactgctgacgctctgagtgaggacggtctcagccactggaacacc
acaaagttttacggcgcgtggaggagaggcagcaccgccggaggctgcaggaacaatccc
aacacgttctggatcaaccctcagtacaagatcaccttgctggaggaggatgacgaccca
gaggacgatgaggtggcgtgcagctttttggttgctctcatgcagaaggaccgccgcaaa
taccgccgccagggtcaggacacgcacaccattggctttgctctttatgagattccagaa
gagtacagaggctgcacgaatgtccatctgaagaaggatttcttcctgactcattcatcg
tgtgcacgctccgagacattcattaacctgcgagaggtgagcacacggctgcgtctgccc
ccaggggaatacctaatcgtcccctccacctttgaggctagtcaggaggcggactttgtc
ctcagagtcttcactgagaagcaatcggaaacagaagaactggatgatgaaatctctgca
gattttggagaggaagaagaagtaactgaagatgacattgatgactcttttaagtccatg
ttcgcacagctggcaggagaggacatggagatttctgtccacgagcttcggaccattctc
aacagagtcgttacccggcacaaagatctgaagactgatggcttcagtatggaatcatgc
aggagcatggtcaacctgatggacaaagacggtagtgcccgtttagggctggtggagttt
cagatcctctggaacaagatccgaaagtggctggtcattttcagagattttgacctggac
aagtccggggccatgagctcatatgagatacgtcttgctgtagagggagcaggtttcaaa
ctgaataacaaactgaaccagattctggtagcccggtatgcggagaacgagatggtcgac
tttgacaacttcatctgctgcttggtcaagctggaagctatgttcaggtctttccagcac
ttcgacaaggatggatcaggacaggctgagatgaatgtaacggagtggctttacctgaca
atgtgtggttga
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integrated database retrieval system
