KEGG   Trypanosoma brucei gambiense: TbgDal_III3440
Entry
TbgDal_III3440    CDS       T06526                                 
Name
(RefSeq) katanin, putative
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
tbg  Trypanosoma brucei gambiense
Pathway
tbg03250  Viral life cycle - HIV-1
tbg03272  Virion - Hepatitis viruses
tbg04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:tbg00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    TbgDal_III3440
   03272 Virion - Hepatitis viruses
    TbgDal_III3440
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    TbgDal_III3440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tbg04131]
    TbgDal_III3440
   03400 DNA repair and recombination proteins [BR:tbg03400]
    TbgDal_III3440
Membrane trafficking [BR:tbg04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    TbgDal_III3440
DNA repair and recombination proteins [BR:tbg03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    TbgDal_III3440
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 AAA_16 AAA_5 AAA_22 AAA_14 AAA_2 USP8_dimer RuvB_N DUF815 Viral_helicase1 TIP49 AAA_24 Ribosomal_60s AAA_25 AAA_17 NPHP3_N AAA_7 RNA_helicase AAA_33 IstB_IS21 AAA_18 Parvo_NS1 AAA_28 nSTAND_NTPase5 CTX_RstB Mg_chelatase nSTAND3 PPV_E1_C Sigma54_activat PhoH bpMoxR
Other DBs
NCBI-GeneID: 23859134
NCBI-ProteinID: XP_011772296
UniProt: C9ZKZ7
LinkDB
Position
3:complement(<765283..>766617)
AA seq 444 aa
MSVDFTSKAVELFKKAARHDEQGEYREAYHWYMEAIEVFITAIKYETKNVTKRDLLRKKT
MEITERAEKIKEYLENCDANRSGGQASSAVGQKTASSAKKAKEDEEDDKRLKSGLDNAII
RVKPNVQWSQIAGLEAAKEALKEAVILPVRFPQLFTGNRKPWKGILLYGPPGTGKSYLAK
AVATEADGTFLSVSSADLMSRWLGDSEKLVRNLFEKAREAYREGGKPAIIFIDEIDSLCS
ARSDGENDASRRIKTEFLVQMQGVGHDDEGVLVLGATNIPWALDSAVRRRFERRIYIPLP
QAHARCQMIKIHLGDTQHSLTDEDCNALAKMTEMYSGSDISIVVRNAMMECVRSVQLATH
FKRVTGPDPKDPTRTVNDRLVPCSPGDPNAIPMTMNDITESEKLMPLPVTMQDFIKALRT
ARPSVSSEDITQHVKFTEEFGQEG
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgtccgttgatttcacgtccaaggcagtggaattattcaagaaagctgccaggcacgat
gagcaaggggagtacagggaagcataccactggtacatggaggcgattgaggtttttatt
actgccattaagtacgagaccaagaacgtgacaaagagggatttgctgagaaagaaaacg
atggagataacggagcgggcagaaaagatcaaagaatacctcgaaaactgcgatgcaaac
cgtagtggcggtcaagcttccagtgctgtggggcagaagacagcttcatccgcgaagaag
gccaaggaggatgaagaagacgataagcggctgaaaagtgggttagataatgcgattatc
cgtgtgaagcccaacgtacagtggtctcagattgcggggttggaggctgcaaaggaggct
ttgaaagaggctgttattctccccgttcgtttcccacaactgttcactggaaacagaaaa
ccatggaagggaattttattgtatggtccaccaggtacagggaagtcgtatcttgcaaag
gctgtggcgacagaagcagacggcacattcttgagcgttagtagtgcagatttgatgtcc
cgctggctgggtgattcggaaaaattggtgcggaacctcttcgagaaggcccgtgaggcg
tacagggagggggggaaacccgctattatttttattgatgagattgactctctttgctca
gcgaggtctgatggtgagaatgacgcctcccgtcgtatcaaaacggaattccttgtacag
atgcaaggagtaggccacgacgacgaaggtgtcttagtgctgggcgcaacgaatatacca
tgggcccttgacagtgcggtacggcgacgcttcgagcgccgtatatacataccgcttccg
caagcccatgcccgatgtcaaatgattaagattcatctcggtgacactcagcattccctc
acggatgaggactgcaacgctttggcaaaaatgacagaaatgtactcgggcagtgatatc
agcatcgtcgtgcggaatgccatgatggagtgcgttcggtcagtgcagttagcgactcac
ttcaaacgtgtaacgggaccggacccgaaggatccaacgcggaccgtcaacgatcggctt
gtgccgtgctcgccgggtgaccccaatgccattcccatgacaatgaatgatattacggag
tctgagaaactgatgccgcttccagtgaccatgcaggactttatcaaggcactgcgcaca
gcccgtccttccgtatcgagtgaagacattactcagcatgttaaattcactgaagagttt
gggcaggagggataa

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