Trypanosoma brucei gambiense: TbgDal_IX7210
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Entry
TbgDal_IX7210 CDS
T06526
Name
(RefSeq) DNA-repair protein, putative
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TbgDal_IX7210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbg03400
]
TbgDal_IX7210
DNA repair and recombination proteins [BR:
tbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
TbgDal_IX7210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
BHD_1
Rad4
BHD_2
Motif
Other DBs
NCBI-GeneID:
23860766
NCBI-ProteinID:
XP_011776911
UniProt:
C9ZYZ6
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Position
9:1533118..1535424
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AA seq
768 aa
AA seq
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MGQQKKDAAQSVAAVAAQNVDSYLRGVTSRARVPSATGGRGTRRRLASQAEVAAAKIKEQ
PKSLDDFADADNGDDEWEEVMLPTSFTPSSSTKPEVKVKDEKNGIVETPEFGATGPNPGQ
GGVKAELVDLTDEENRHNRILASVTPMGGQQSSSPSSGQWRQRDPAYEQMLEQQQLLAAK
RRSERTKRAVEEISTLLFALLRGRKIVQQARHPKLVRGLLRLYVVEDATSKTYPLLRAVL
QAKGLYAKAMNPAVSTPSLAPCWVTANKDSVNNYTSASISALLRGIECVFVLDGGIEHAA
LSNWAAPIQPGYLFEQLRKYRYSIGSPGCRIVLPHSLYICAVFLSLAAVSNVSCRLVVAV
ERMRRGDMSEKSGSDGGSPPKEAMSLFGSGKKRKRGDDAGAKQNTPKRLPSSCFWLEVWC
PQRQSYISVNPCGGCATLFAAPYTFSVGGDAIMDVTPRYSIKYSSAFTHRLGRCDRYRHI
WKDLQWNDNREASEVIVDLFRRDVGKYTEAQMQREKKQLHSLTYAEEVPKTLTALQKHPL
FILENGLSRYEGIYPKDSTTMVGSVKGHIVFKRSAVVSLRSRDGWLREGRTVSGEEEPYK
VIPPPPSRPFSKSSALFGVWQTKPFAPEPLGEDGSIPKHGNTQWYILLDKPAPIGLVHMQ
QPNIIRVARRMNIDFGIVVTGYRRRRLNEARSSGWEVVTDGIIVKETNTGSLVKAYEEWK
QLTEEQEAAKRKQRAYRWWMHFVQHRLAYLRIRQQYLEGATHGHLSSH
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggggcagcagaaaaaagatgcggctcaatctgtagctgccgttgctgctcagaatgtt
gacagttaccttcgcggtgtgacgagtcgagcccgagttccttcggcaactggcggaaga
ggtacgcgtcgtaggctggcctcccaggcagaagtcgctgcagccaagatcaaggagcaa
cctaagtctcttgatgacttcgctgacgctgataatggtgatgatgagtgggaggaagtg
atgttacccacctcatttacaccgtctagcagcacaaaacccgaggtaaaggtgaaagat
gagaaaaatggcatcgtggaaaccccagaatttggtgcaacaggaccgaaccccggacag
ggaggtgtgaaggcggagctagtggatctcactgacgaggaaaacagacacaataggata
ttggcgagtgtaacgccaatggggggtcaacaatcttcctccccctcctccgggcaatgg
cggcagcgtgatcccgcctatgagcaaatgcttgaacagcaacaacttcttgccgcgaag
cgccgctcggaacgcacaaaacgtgctgtggaagaaatttcaaccttgttatttgccttg
ttgcggggaaggaaaattgtgcaacaggcgcgtcacccaaagttagttcgtggtcttctg
cgcttatatgtagttgaggatgcgacatccaagacgtacccgcttttgcgtgccgttctt
caagcgaaaggtttgtatgcaaaggcgatgaatcctgctgtgagtaccccgtcccttgca
ccttgttgggtaaccgctaataaggacagtgtcaacaattacacttctgcttctatttcc
gcgttgcttcgtggtatagaatgtgtttttgtactggatggcggtatagaacatgcggct
ctatctaactgggctgctcccatacaacctgggtatctttttgagcagctgcgtaagtac
cgctactccattggatcacctgggtgtagaatcgttctcccccatagtttgtatatttgc
gctgtgtttctttctctcgcagctgtttctaatgtttcctgccgtctggtggtggcggtg
gaacgaatgcggcggggagacatgtcggaaaaaagcgggagcgacggaggatcgccgccg
aaagaagcaatgagtttgtttggttctggaaagaagcgcaaacggggcgatgatgctggt
gcgaagcaaaatactccgaaaagactgccatcttcttgcttctggttggaagtttggtgc
ccgcagcggcagtcgtacatttcagttaatccatgtgggggttgcgccacactttttgcc
gctccatacaccttttctgtgggcggagatgcgattatggacgtcaccccccgttactcc
attaagtacagcagtgctttcactcacaggttaggccgatgtgataggtatcgccacatc
tggaaagaccttcagtggaacgataacagggaggcgtctgaagtcatcgtcgacttgttt
cgcagggatgttggtaaatatacggaggcgcagatgcagcgggagaagaagcagctgcat
tccctcacgtacgcggaggaggtgccgaagaccctcacggcactgcagaagcatccgctt
ttcattctcgaaaatggtctcagtcggtacgagggcatataccccaaagacagcaccacc
atggttggcagcgttaagggccatattgtgttcaagcgctctgcagttgtgagccttcgc
agtcgcgatggttggctgcgggagggtcgcacggtgtccggtgaagaagaaccatacaaa
gtaataccaccgccaccctcacgtcccttctcgaagtcgagtgctttatttggtgtttgg
caaacgaaaccattcgctccggagccgttaggtgaggatggtagtattcccaagcacggc
aatacgcagtggtatattctgttggataaaccagcaccaatcggattggtgcatatgcag
caaccgaatattattcgggtggcaaggcgtatgaacattgattttggtatcgttgttact
ggatataggcggcggcgtttgaatgaagcgcgttcctcaggatgggaagtggtgactgac
ggtatcattgtgaaggaaactaacacaggaagtcttgtcaaggcttatgaggagtggaag
caattaacggaggaacaggaggcagcgaaaaggaagcagagggcgtaccggtggtggatg
cattttgtgcagcatagactggcatacttgcgtattcgtcagcagtatttggagggagct
acacatggacatctttcctctcactga
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