Trypanosoma brucei gambiense: TbgDal_X1760
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Entry
TbgDal_X1760 CDS
T06526
Name
(RefSeq) hypothetical protein, conserved
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TbgDal_X1760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbg03019
]
TbgDal_X1760
Messenger RNA biogenesis [BR:
tbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TbgDal_X1760
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TbgDal_X1760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
Motif
Other DBs
NCBI-GeneID:
23864998
NCBI-ProteinID:
XP_011777361
UniProt:
D0A1F3
LinkDB
All DBs
Position
10:complement(355997..362968)
Genome browser
AA seq
2323 aa
AA seq
DB search
MLYEHITDIGSSRGAAARYLIASATKSSLQTTLQALEKIAGQSVELYRFVVSAAVSSIWT
PPQTEEKNLLVSKLVSTALEKSNALTLVSAAVDESPVAVTKESLVTLMTRDLKLTPPQQL
QFAMGLLAGSKKGKEAAAEFLNGISVAQYTVKEDVASLWSYSVLARQLGDVQALETQLSA
AAAGGANDRVTVLPHDGVVDMHVSLSRIIDELGTACVATPADCRELLSLFPRPVTQVDVA
DVVGFFASQGSAPTDTNTYNALMASAGREPTKVQQNAAISPFPLLELLQERVQEPVDWDT
VLRMLDKSNEEPFVRKHVSIVFDAYCKFKGTGTPGVYPPITIFLGRWSNVGRQRTVLEYI
LKHPEKVSMQGLSCDQMAPIELVEMDAADAASSPTTSGASASPSTVPESRAGEVELWRYF
PFLEAAVHVASRDGAFDAETLRPAALRYPLLMLYSLLFGSFPGTMKNFSTAKLILRDSRL
PLERVATTIIPEAERRGKLNTVISLLSELTIVVPSRTIDVMEAVLKSKNAVRAFLAVGGN
PRLVTAIAMCMDESNEGGGGGANCGVSGGAGDSWISKALEGKLHFRAHAAENRFAVATSI
VEVAEQLLDKQKYVPKATAALNTFLASSLKDLLRDVAEQARILLASTDSLFPTDVENDAT
EFYRRMYKAGDPTISASLAFIEQLLKSSKSRDKQLCACIVSIMFEECNAIGCYPHKELQL
FATLYGQMIARELLPPNQQQRAWTLLLPVIVKPTDHLVEEYGIIALEQIKPRLAEWPQYG
RALRHVKDLDIRIPGIMAAINRGIKAEEAARQSQSRAQNQEKTTQQQKEVESLLSDPAVL
ALSTERRDNMLAAEQQKDRVAAATLHQHDIGTLLSKKSITAPPRVIQEQINFIIGNTDLH
NVENNARELAKQLRPEYYEFFAEYFVVKRAALEPNYHPTYLNLLNNLQSKQLEKAIRSAT
VSSIKLLLSSDKIRADPGERSLLKNLGYWLGLLTLAKNIPITAQELCFKDLIILGLREGK
LMAVVSCIARVLHHCMDSRFFCPPNPWTMRQLCLLWEMYNLRNLRVTLRFEVDLLCKHMN
VKLEEIEQYYNMHPIHSSTQLCISDVYREINIHQSADFRVDKMELQDVVQQPHKQVQQPQ
QAAQPQLQTQVARANRPLQANAEPFKPKDSMVPSGGALAFEAVGPRRPPIVITPETVRVS
EEEASLFGERLAVYKGYLAKTLERVTQELKPTVQRSGTIAAVTACHITTKDFLFDRDIKA
QLRAADAMARSLASNLCTVAIRDALPEPFNVQVGDLISRLIDVNVPSYTERRERLKGLIR
ENNMDLCVRALEWQAAEEGAKRLHEKLDKIIKEKIDQITAHEPPRAPKEYHDVRDLLMHM
GEVLRPPHNLPPLQRAVYEEFNNSVPVVGLLTAYVRTLEDATVQHYSTGDAKVLSLTSPE
FANGHFGESHDVIRTRVIGISNIINAETAIYCVGPMLRKLFVLAGAMKRADSGTAASNDL
TTARHRNVCNLLNEVYLFVLQTCYERGGDIIREELTQLYLQAEQRWSYTDLAVNLLRIKV
LNVSRFDAALSKALLAEGMGRQGVVDFAGATLSRVIVNEKLLSAKELRDTVSQLESIASK
QDNQTPRQQQNQPKQQRHQPQSQQLPASGQDSGAMGGAQMAPGAAAPTNAMRASPALSNL
VEQHVRRLVVPTLAPQNQEDAEKIRGLFEEWLIVNARRMHSSSSESNQASGAATNAPSQE
GATAPTTSSPASATAASTSTTSAALPGNKPPPQYEYMMKLRDNKQLDGPQLRTFLTTSLR
FCVEHYATKSLELERSNPAVLGRALTAEWKPGNAPPHRYQYDDGLFTHVDALSDLVTVLL
YYCSLKNESRTLLTLLRRVLDAFQWALIDNHQAVVVRLQQAQNPNHLGNAKSELPAGTAY
APMFQQQPYVRFFSNLFTTLVRADSPKRETMEQITSAFADTLHNLPPLKYPAFTFGWLEL
VSHRIFLNRCLRSPVPWPSYVALLVQGLEFIERFTREGNISKNVLVFYKAFFKLMLVLTH
DYSRFLITYHYQLCDAIPPYCVQLLNTVLCSFPSGVKLPEFFARVPDDGSEMRKHPATDN
QVKCIEESFKQHHFDGNTLSEKLQDDRPMSESYMQSIVEKLQSLHNWRLMNAIVLHVCIV
YLQVNDHAVKPNFPESNAMRFYRHLAGSLDHEHRYYFICSCANHLRYPNCQTNFFVKVIS
NLFLPHRSIRNAVVQQCIQEQITRVAVEKTLIIQPHPWGVLSTFMELMRAPEYGFWEKSF
ICSTSFLESMFTKLRRSVESRNAQQQVQQSTGSASTSATQGKK
NT seq
6972 nt
NT seq
+upstream
nt +downstream
nt
atgttgtatgagcatattactgacatcgggagctcccgtggtgctgcggcgcggtacctc
atagcgtctgcgacgaagagttccctccagacaacgctgcaggctctagaaaagatagcc
gggcagtctgtagagttgtataggtttgttgtgtctgcagctgtctcttctatatggacg
cccccgcagacagaggaaaaaaatctccttgtctctaaacttgtgtcgacggcccttgaa
aagagtaacgcgcttacgcttgtgtcggcggccgttgatgagtcgccggtggctgtaacg
aaggagtctctggtgaccctcatgacgcgggacttgaagctcacgcccccacagcagctg
cagtttgcgatgggtcttctggcaggcagcaaaaagggaaaggaggcggctgcggagttc
ctcaatggcatcagtgtggcgcaatacacagtgaaggaggatgtcgcaagtctttggtcc
tacagtgtcctcgcacgacaactgggtgatgtgcaagctttggagactcaactctctgcc
gcagccgcaggtggtgcaaatgacagggttacagtattgccacatgatggtgttgtcgat
atgcatgtcagtctgtcaaggatcattgatgaattaggcacggcttgtgtggcgacgccg
gcagactgtcgtgagttgctcagcttgttcccccgtcccgtcacccaagtcgatgtggcg
gatgtggttggtttcttcgcctcgcaagggagtgcgccaacggacacgaacacgtataac
gctctcatggcttcagccgggcgtgaaccaacaaaggtacagcaaaacgccgccatttca
ccgtttccacttttggagttacttcaggagagagtgcaggagccggtggattgggatacc
gtccttcgtatgcttgataagagtaacgaggaaccattcgtgcggaagcatgtgtctatc
gtgtttgatgcgtattgtaagttcaagggtaccggcacacccggtgtgtatcccccgatt
accatattcctcgggagatggagcaacgtcggccggcagcgcaccgtgttagaatatata
cttaagcacccagagaaagtttcgatgcaggggctgtcgtgcgaccaaatggcaccaatc
gagctggtagaaatggacgctgcggatgcggcttcaagtcccacgacttccggtgccagt
gcgtcaccgtcgacagttcctgaaagccgcgcgggagaagtagagttgtggcgctatttc
cctttcctcgaagcagctgtacacgttgcaagccgcgacggtgcctttgatgccgagacg
ttgcggccggcggcgctgcgctatccacttctcatgctgtattccttgctctttggctcg
ttcccaggtacgatgaaaaacttcagcaccgcgaaactgattttgagggactctcggctt
ccgcttgaacgcgttgcaactaccatcatccccgaggcagaaaggcgcggaaagttgaac
accgtcatttctctactgtctgagctaactattgtggtcccgagtcgtacaattgacgta
atggaggcagtgcttaagtcaaagaacgctgttagggcgttccttgcggttggtggcaac
ccacggttggttactgctattgcaatgtgcatggatgagtccaatgagggaggcggcggc
ggagccaactgcggtgtgagtggtggtgctggtgactcttggattagtaaggcacttgag
ggaaagttgcactttcgggctcacgccgcagaaaaccgctttgcagtggccacgtctatt
gttgaggtagcggagcagctgctggataaacagaagtacgtcccaaaggctactgccgca
ctcaacactttccttgcttcttcactgaaggatctgctccgtgacgttgccgaacaagcg
cgcatactcttggcatcaactgattctcttttccccactgacgtggagaacgatgcaacg
gagttttacaggcgtatgtacaaggcgggtgacccgaccatctcagcatcactcgctttc
attgagcagcttttgaaaagtagcaagagtcgtgataagcagctctgtgcgtgcatcgtg
agcatcatgtttgaagagtgcaacgctattggttgctatccccacaaggaactacaactg
ttcgccacactttacggtcagatgatagcacgggagttgcttccgccgaaccaacaacaa
cgcgcatggaccctcctgttaccggttattgtaaagcctactgaccacctggtggaggag
tatggaatcatagcgttggaacaaatcaaacctaggctggcagagtggccgcagtacggg
cgtgctctgcgtcatgtgaaggacctcgacataagaatacccggtatcatggccgccatt
aacaggggtatcaaggcagaggaggcggctcgccagtcgcagagccgtgcacagaatcaa
gagaagacgacacaacaacagaaggaagtggaatcgttgctctctgacccggcggtcctg
gctctcagcacggaacgtcgcgacaatatgttggcagcggagcagcagaaggatcgcgtg
gctgcagcaacgttgcatcagcacgacatagggacgctgctgtcgaagaagagtattaca
gcaccgccgcgtgttatccaggagcagatcaacttcataattggtaacacggatttgcac
aacgttgaaaataatgcccgtgagttagcgaaacagctacgtccggagtactacgagttc
tttgctgagtatttcgtggtgaaacgtgcagcgttggagccgaattatcatcctacttac
ctgaacctcctcaacaacctgcagtcgaagcagttggagaaggcgatacgcagcgctacc
gtttcttccatcaagctgctgcttagcagtgacaagatacgcgccgatcctggggagcgc
tcactgctcaagaatcttggctattggcttgggctcctaaccctagctaagaacattccc
attacggctcaggaactatgcttcaaggatttgattatcctcgggttgcgcgagggaaaa
cttatggcagtagtttcatgtattgcaagagtgttgcatcattgcatggactcacgcttc
ttctgcccacccaatccgtggacgatgcggcaattatgtctcctgtgggaaatgtataac
ctcagaaacctgcgggtgacactcaggtttgaggtggatcttctttgcaaacacatgaat
gtgaaactggaggaaatcgagcagtactacaacatgcatcccatccactccagcacacag
ttgtgcatatctgatgtgtatagagaaataaacattcaccagagtgccgacttccgtgtg
gataagatggaactccaggatgtcgttcaacaaccgcataagcaagttcaacaaccacaa
caggcagcgcagccgcaattgcaaacccaggttgcccgtgccaaccgccctcttcaggcc
aacgcggagccctttaagccaaaggattctatggttccgtcgggtggagcacttgctttt
gaggctgtgggcccgcgtaggcctcccatcgttatcacacctgaaacggtgcgggtaagt
gaggaagaggcgagcctttttggcgaacggcttgctgtgtacaagggatacctggccaaa
acgcttgaaagggttacgcaggaactcaagccgacggtgcagcgttccggcacaattgcc
gctgtaacagcctgccacattaccactaaggactttcttttcgaccgcgacattaaggcg
caactccgggcagcggatgcgatggctcgttctctggcttccaacttgtgcacagtggcc
atccgtgacgcacttccagagccatttaacgtgcaggttggtgatctcatcagccgtttg
attgatgttaacgtgcccagctacacggagcgccgtgagcggctgaaagggctaatccgt
gaaaataacatggatttgtgcgtacgtgcgcttgaatggcaggcggcagaggaaggagcg
aagcgcctgcatgagaagttagacaagattatcaaggaaaagattgatcaaattaccgcc
catgaacccccacgagccccaaaggagtatcacgatgtgcgggatctgttgatgcatatg
ggtgaggtgttgcgaccgcctcacaatttgccaccgctgcagcgggcagtctatgaggaa
ttcaacaacagtgtgcccgttgttgggctgcttactgcgtatgtgcgtacgttggaggac
gccacagtccaacactactctacgggcgacgctaaggtgctatcgctgacaagccccgag
tttgcgaacggacactttggcgaaagccacgatgttatccgcactcgggtaatcggtatt
tcaaacatcatcaatgccgaaacagccatctactgcgtcggcccaatgcttcgcaagttg
tttgtgcttgcaggtgcgatgaagcgtgccgatagtgggacagccgcaagcaatgacctc
actactgctcgtcacagaaatgtctgcaacctactcaacgaggtctacctctttgtattg
caaacgtgttatgagcgcgggggagatattattcgcgaagaattgacgcagttgtatttg
caggcggaacagcgctggagctacacggaccttgcggttaatctcttgcgtattaaggtg
ctcaacgtctccagattcgacgcggcgctctctaaggcactgttggctgaggggatgggg
cggcaaggtgtagtagacttcgctggcgcaacattatccagggtaatcgtgaatgagaag
ctccttagtgcaaaggaattgagggacacagtgtcccagctagagagcattgccagtaaa
caggacaaccaaacgccccgccagcagcagaatcagcccaagcagcagcggcaccagcca
cagtcccagcaactgcctgcgagtggacaggattcgggagcaatgggtggggctcagatg
gcgccgggagccgcagcaccaaccaacgccatgcgagcctcccctgcactctccaatttg
gtagagcagcatgtacggcggcttgttgtgcctacgcttgcaccccaaaatcaagaagat
gcagagaaaattcgaggattgtttgaagagtggttgattgttaacgcacggagaatgcac
agctcgtccagcgagtctaaccaggccagtggtgccgcgaccaatgctccgtcacaggag
ggcgccacagcaccgactacatcgtcccccgcttctgccaccgctgcttctacgtctaca
acatcagcggcgttaccgggtaacaaaccaccaccacagtatgagtacatgatgaagtta
cgagacaacaagcagcttgacggcccgcaacttaggacgttcctcactacgtcactacgc
ttctgtgttgaacactacgccaccaagtcgttggagttggagcgctccaacccggcggta
ctcggccgtgctttgaccgctgaatggaagccaggcaacgctccaccccatcgttaccag
tacgatgacgggcttttcacacatgtggatgccttgtctgacctagtgacagtgttgtta
tattactgctcgttgaagaacgagtcgcggacacttcttacgttactcaggcgggttctg
gatgcgttccaatgggcgctcatagataatcatcaggcggtcgttgtacgtttacaacag
gctcagaaccccaaccaccttggaaatgcaaagtctgagcttcccgctggcaccgcctac
gcaccgatgttccaacaacaaccctacgtgcgcttcttcagtaatctctttaccacgctc
gtgcgtgcggattcgccaaagcgtgagacgatggagcaaatcacaagtgcttttgctgat
actcttcataacctcccgccactcaaatatcctgcgttcacttttggatggctggagctt
gtgagtcaccgtatattcctcaaccgctgtctacgttcgcctgtgccgtggccctcctat
gttgcgctgttagttcaggggctcgagtttattgagcgcttcacgcgtgaaggaaatatt
tccaaaaacgtactcgtgttctacaaggcgttcttcaagctgatgttggtactcacacac
gactactcacgctttcttattacatatcactaccagttgtgtgacgccatcccaccgtac
tgtgtgcagttgctaaacactgttttgtgctccttcccgtcgggtgtgaagttaccggag
ttctttgcgcgtgtgccagacgatggctcggagatgcggaagcaccctgccaccgacaat
caagtaaagtgtattgaggagagtttcaaacagcaccacttcgatggaaacactttgtcc
gagaaattgcaggatgaccgaccaatgtccgagtcttacatgcaaagtattgtggagaag
ttgcagtcgttgcacaactggcggctgatgaatgccatcgtactgcacgtttgcattgtg
tacttgcaggtaaacgatcatgctgtgaagcccaactttcctgaatccaacgctatgcgt
ttctaccgccaccttgcgggctcattggaccacgaacaccgctattactttatctgttcc
tgcgctaaccatctgcgttacccgaactgtcaaacgaacttcttcgtgaaggttatatcc
aacctcttccttccccaccgatccattcgcaacgccgtggttcagcagtgcatccaagag
caaatcacccgtgtagcggtggaaaaaacactcatcattcaaccgcatccgtggggagta
ctcagtacattcatggagctcatgagggccccagagtatggtttctgggagaagagtttt
atatgcagtacatctttcttagagagtatgttcacaaaactgcgacgctcagtggagtcc
cgaaacgcccagcaacaggtgcagcaatcgaccggatctgcttccacctccgcaactcaa
ggcaagaagtag
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integrated database retrieval system
