Tepidiforma bonchosmolovskayae: Tbon_02475
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Entry
Tbon_02475 CDS
T06308
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
tbh
Tepidiforma bonchosmolovskayae
Pathway
tbh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tbh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tbon_02475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tbh03021
]
Tbon_02475
03400 DNA repair and recombination proteins [BR:
tbh03400
]
Tbon_02475
Enzymes [BR:
tbh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tbon_02475
Transcription machinery [BR:
tbh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tbon_02475
DNA repair and recombination proteins [BR:
tbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tbon_02475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
QFG02207
UniProt:
A0ABX6BYZ2
LinkDB
All DBs
Position
complement(479423..483304)
Genome browser
AA seq
1293 aa
AA seq
DB search
MTTTRDVVPGGTIAPLTVKTYGRIPDVLELPNLIRIQLDSFDWFLREGLRELFDELSPIQ
DFTGSRMDLIFGDYELRAPKASMEECRERDMTYAAPLFVDVELRVKESGEIKEQRLFFGD
FPLMTDRGTFIINGAERVVVSQLVRSPGVYYTIETDQATGKRLCHGKLIPARGAWLEFET
SNRDVLYVKVDRKRKVPVTTFIRAIDVPGLVPGDRDNPRFEKYWKAVDSGDERAREAALR
DLEQELGTAERILAMFEAVDTSDIRQYVRATLEKEPRDPGVQNKHDALLDFYRKIRPGDP
PTTDNARNLLKQLFFDPRRYDLGRVGRHKLNKRLELEDPTDQRWLRPYDLVAIIREQINI
NNGRGHHDDIDHLGNRRVRAVGELIQQQFRVGLLRMERVVRERMTITDPEEATPSALINI
RPVVAAMKEFFGGSQLSQFMDQTNPLSELNHKRRLSALGPGGLSRDRAGFDVRDVHHSHY
GRICPIETPEGPNIGLIGSLATYARLNKFGFIETPYRRVYREMVSDNPNLVGRILREDAL
DRDGNVIAPRGTRIDAALAEKLAAAGRTVAIQPWVSNEIVYLTADEEDKFKVGQANTRID
NDGHFIDERVEIRLFEKFMTVPPIEVDYIDVSPKQMVSVASALIPFLEHDDANRALMGAN
MQRQAVPLVRPEVPLVGTGMERRAAVDSGHVILADGPGEVLEATGTHIKIRYDDPALNTD
DGGACRTYRLTKFTRSNQGTCLNQRPIVFRGERVAAGQPIIDSSSTQGGDLALGQNILCA
FMSWEGYNFEDAIILSENLVREDKFTSIHIEKHEVEARQTKLGDEEITRDIPNVGDDALA
QLDEDGIIRIGAEVREGDILVGKVTPKGETELTAEEKLLRAIFGEKARETKDTSLRVPHG
ERGKVIDVKVFDRNNHDGLPAGVNKLVRVSIAQRRKISEGDKMAGRHGNKGVISRILPRE
DMPYLEDGTPVDIILNPIGVPSRMNIGQVLETHLGWAANTLGFRAISPVFDGARDYEIDD
ALALAWMAHEAGAYYYVDPRDRGFDPERLKAWIAEQGYDPDAIYTSPEDGAPARACLEIW
LNRHRKETGQPPIEPGRYSREELDELAKEVYRDTNVPPPLFGKMRLYDGRTGEPFDQPVT
VGYIYMLKLIHLVEDKIHARSTGPYSLITQQPLGGKAQFGGQRFGEMEVWALEAYGAAHI
LQELLTVKSDDVVGRVKTYEAIVKGEDVLEPGVPESFKVLVKELQSLGLAVEVSNDEGSS
VSFIDDSANDLPELGLNLTGFEREEDFFNARGE
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaacgcgcgacgtggtcccggggggcaccattgccccgctcaccgtcaaaacg
tacggccgcatcccagacgtcctagagctccccaacctcatccgcatccagctcgattcc
ttcgactggttcctccgcgaaggcctccgcgagctgttcgatgagctctcccccatccag
gacttcaccggcagccggatggacctcatcttcggcgactacgaactgcgcgcccccaag
gcctccatggaagagtgccgggagcgcgacatgacctacgccgcccccctcttcgtcgat
gtcgagctccgcgtcaaagaatccggcgaaatcaaagaacagcgcctcttcttcggcgac
ttccccctcatgaccgaccggggcaccttcatcatcaacggcgccgagcgcgtcgtcgtc
tcccagctcgtccgctcccccggcgtttactacaccatcgaaaccgaccaggccaccggc
aagcgcctctgccacggcaagctcatccccgcacgcggtgcctggctcgaattcgaaacc
tcgaaccgcgacgtcctctacgtcaaagtcgaccggaagcgcaaggtccccgtcaccacc
ttcatccgcgccatcgacgtccccggcctcgtccccggcgaccgcgacaacccccgcttc
gaaaagtactggaaggccgtcgattccggtgatgagcgtgcccgcgaagccgccctccgc
gacctcgaacaggagctcggcaccgccgaacgcatcctcgccatgttcgaggccgtcgac
acgagcgatatccgccagtatgtccgcgctaccctcgaaaaagagccgcgcgaccccggc
gtccagaacaagcacgacgccctgctcgatttctaccgcaaaatccgccccggcgacccg
cccacaaccgacaacgcccgcaacctcctcaagcagctcttcttcgacccccgccgctac
gacctcggccgggtcggccgccacaagctcaacaagcgcctcgagctcgaagaccccacc
gaccagcgctggctccgcccctacgacctcgtcgccatcatccgcgagcagatcaacatc
aacaacggccgcggccaccacgacgatatcgaccacctcggcaaccgccgcgtccgcgca
gtcggcgaactgatccagcagcagttccgggtcggcctcctccgcatggagcgcgttgtc
cgcgaacggatgaccatcaccgaccccgaagaggcaacccccagcgccctcatcaacatc
cggcccgtcgtcgcggccatgaaggagttcttcggcggcagccagctctcccagttcatg
gaccagacgaacccgctctccgagctcaaccacaagcgccgcctctcagcgctcggcccc
ggcggcctctcccgcgaccgggccggcttcgacgtccgcgacgtccaccacagccactac
ggccgcatctgccccatcgaaacccccgaaggcccgaacatcggcctcatcgggtccctc
gcgacctacgcccggctgaataagttcggcttcatcgagaccccctaccgccgcgtctac
cgcgaaatggtctccgataacccgaacctcgtcggccgcatcctccgcgaagacgccctc
gaccgcgacggcaatgtcatcgcgccccgcggcacgcgcatcgatgccgccctcgccgag
aagctcgccgccgccggccgaacggtggcgatccagccgtgggtctcgaacgagatcgtc
tacctcaccgccgacgaagaggacaagttcaaggtcggccaggccaacacccgcatcgac
aacgacggccacttcatcgatgagcgcgtcgaaatccgcctcttcgaaaagttcatgacc
gtcccgcccatcgaggtcgactacatcgacgtctcccccaagcagatggtctccgtcgct
tccgcgctcatccccttcctcgagcacgacgacgcaaaccgcgcgctcatgggcgccaac
atgcagcggcaggccgtccccctcgtccgtcccgaggtgccgctcgtcggcaccggcatg
gagcgccgcgccgctgtcgactccggccacgtcatcctcgccgatggccccggcgaagtc
ctcgaagccaccggcacccacatcaaaatccgctacgacgaccctgccctgaataccgac
gacggcggtgcctgccgcacctaccgcctcaccaagttcacccgctccaaccagggcacc
tgcctcaaccagcggccgatcgtcttccgcggcgaacgcgtcgccgccggccagcccatc
atcgatagctccagcacccagggcggcgacctcgcgctcggccagaacatcctctgcgcc
ttcatgagctgggagggctacaacttcgaggacgccatcatcctctccgaaaacctcgtc
cgcgaagacaagttcacctccatccacatcgagaagcacgaggtcgaagcccgccagacc
aagctcggcgacgaagaaatcacccgcgacattcccaacgtcggcgacgacgccctcgcc
cagctcgacgaagacggcatcatccgcatcggcgccgaagtccgcgaaggtgacatcctc
gtgggcaaggtcactcccaagggcgaaaccgaactcaccgccgaagaaaagctgctccgc
gccatcttcggcgaaaaagcccgcgaaacgaaggacacctccctccgcgtcccccacggc
gagcgcggcaaggtcatcgacgtcaaggtcttcgaccgcaacaaccacgatggcctgccc
gccggcgtcaacaagctcgtgcgcgtctccatcgcccagcgccgcaaaatctccgagggc
gacaagatggccggccgccacggcaataagggcgtcatcagccgcatcctcccccgcgag
gacatgccctacctcgaagacggcaccccggtcgatatcatcctcaatcccatcggtgtc
cccagccgcatgaacatcgggcaggtcctcgaaacccacctcggctgggccgccaatacc
ctcgggttccgcgcgatcagcccggtcttcgatggcgcccgcgactacgagatcgatgac
gccctcgccctcgcctggatggcccacgaggccggcgcctactactacgtcgacccccgc
gaccgcggcttcgaccccgaacgcctcaaggcctggatcgccgagcagggctacgacccc
gacgccatttacaccagcccggaggacggggcacccgcccgcgcctgcctcgaaatctgg
ctcaaccgccaccgcaaagaaaccggccagccccccatcgagcccggccgctactcccgc
gaggagctcgatgagctcgccaaagaggtctaccgcgacaccaacgtgccgccgcccctc
ttcggcaagatgcgcctctacgacggccgcaccggcgaacccttcgaccagccggtcacc
gtcggctacatctacatgctcaagctcatccacctcgtcgaagacaaaatccacgcccgc
agcaccggcccctacagcctcatcacccagcagcccctgggcggcaaggcccagttcggc
ggccagcgcttcggcgaaatggaggtctgggccctcgaagcctacggtgccgcccacatc
ctccaggagctcctcaccgtcaaatccgacgacgtcgtcggacgcgtcaaaacctacgag
gccatcgtcaagggcgaggacgtcctcgaaccgggcgtccctgagtccttcaaggtcctc
gtcaaagaactccagagcctcggcctcgccgtcgaggtctccaacgacgaaggcagctcc
gtctccttcatcgacgactccgccaacgacctgcccgagctcggcctcaacctgaccggt
ttcgaacgcgaggaggatttcttcaatgctcgaggtgaatga
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