Thiocapsa bogorovii: LT988_22990
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Entry
LT988_22990 CDS
T07840
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LT988_22990 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbog03400
]
LT988_22990 (uvrC)
DNA repair and recombination proteins [BR:
tbog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LT988_22990 (uvrC)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
UHD16080
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Position
5156608..5158491
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AA seq
627 aa
AA seq
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MNDTTANESTAAPDAEDGRLGLDAPARALLERIPQSPGVYRMLDADGTVLYVGKAKNLKR
RVSSYFSRALTRRLQVMVSQIADIEVTVTRTEGEALLLESNLIKSLRPRFNVLLRDDKSY
PFIYLSTQDDFPRLAFYRGPRKSKGRLFGPYPSAWAVRETLQLLQKLFPVRQCEDSFFNN
RSRPCLQYQIKRCSGPCVGLVSREEYAEDVAHTIQFLDGRAEEAIADLGRGMEQAAAALE
FERAAVLRDQIATLSRIQQRQYVSGEGGDLDIIACAQAGGTSCVQVFFIRSGRNLGNKAF
FPKTPDDTDDATLLAGFLAQFYADKQIPPELVVSVEPEERVLLETALSQRAERRVHIKWR
VRAERARWLEMARGNAEVALKSRLGSQAGYGRRIEALRDALDLPERPQRMECFDISHTQG
ERTVASCVVFDGEGPRKSDYRRFNIEGITPGDDYAALHQALTRRYTRVKQGEYPIPDILF
IDGGRGQIRSVGDALQELGIAGVQVVGISKGPDRRPGTELLWLLDVESPLILPSDSPAMH
LVEQIRDEAHRFAITGHRQRRAKARTTSTLEGLAGIGPRRRQRLLKQFGGIRGLARAGVE
DIACVDGIGRQLAQQIYDAFHEEAAGP
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaccaccgcgaacgaatcgactgccgctccggatgcagaggacggtcggctc
gggctcgacgccccggcgcgagccctcctcgaacgcatcccccaaagccccggcgtctac
aggatgctcgatgccgatggcaccgtgctctatgtcggcaaggccaagaacctcaagcgc
cgggtctcgagctatttcagtcgggcactgacacgtcgtcttcaggtgatggtgagccag
atcgccgacatcgaggtcacggtgacccgcaccgagggcgaggcgttgctgctcgagagc
aacctcatcaagtccttgcgcccgcgtttcaacgtcctgctgcgcgacgacaagagctat
cccttcatctacctcagcacgcaagacgactttccgagactcgccttctatcgagggccg
cgcaaatccaaaggccgcctctttggcccctatccgagcgcctgggccgtgcgcgagacc
cttcagctgctgcagaagctgttcccggtgcgccagtgcgaagacagcttcttcaacaac
cgctcccgaccctgtctgcaatatcagatcaaacgctgcagcggcccttgtgtcggactg
gttagccgcgaggaatacgccgaggacgttgcccacaccatccagttcctcgacgggcgc
gccgaggaggcgatcgccgatctcggacgcggcatggagcaggccgccgccgcgctcgag
ttcgagcgcgccgccgtcctgcgtgaccagatcgcgaccctgagccgcatccagcagcgc
caatacgtgagcggggagggtggcgacctcgacatcatcgcctgcgcccaagcgggcggg
acgagctgcgtacaggtcttctttatccggtccgggcgcaacctcggcaacaaggccttc
tttccgaagacacccgacgacaccgacgatgcgaccctcctggccggattcctggcccaa
ttctatgccgacaagcagatcccccccgagctggtggtcagcgtcgagccggaggagcgc
gtgctcttggagacggcgctctcgcaacgcgccgagcggcgcgtgcacatcaaatggcga
gtgcgtgccgagcgtgcccgctggctcgagatggctcgcggcaatgccgaggtcgcgctc
aagtcgaggctcggcagccaggccggttacgggcgccgcatcgaggcactgcgcgatgcg
ctggatctacccgagcggccccagcgcatggagtgcttcgacatcagtcacacccaaggc
gagcgcaccgtcgcctcgtgtgtggtcttcgacggcgaagggccgcgcaagtccgattac
cgacgcttcaatattgagggcatcacccccggcgacgactacgcggcgctccaccaggcc
ctaacacggcgctatacccgggtcaagcagggcgagtacccgatcccggatatcctcttc
atcgacggcggacgcggccagatccgctcggtcggcgatgcgctccaagagctcggtatc
gccggcgtacaggtcgtgggcatttcgaaggggcctgatcgtcgccccggaaccgagcta
ctttggttgttggacgtggagtcgccgcttatactgccgagcgattcccccgccatgcat
ctggttgagcagatccgcgacgaggcccatcgattcgccatcaccggtcatcggcagcgc
cgtgccaaggcacgcacgacctcgacgctggaagggctcgccgggatcgggccgcgtcgt
cgccagcgtcttctgaagcagttcggcggcatccgcggtctggcccgtgcaggggtcgag
gacattgcctgcgtggacggcatcggccgacaattggcacaacagatctacgacgccttt
cacgaggaggccgcggggccctga
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