KEGG   Trypanosoma brucei brucei: Tb10.70.6450
Entry
Tb10.70.6450      CDS       T01013                                 
Name
(RefSeq) transcriptional regulatory protein NOT1
  KO
K12604  CCR4-NOT transcription complex subunit 1
Organism
tbr  Trypanosoma brucei brucei
Pathway
tbr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tbr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Tb10.70.6450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tbr03019]
    Tb10.70.6450
Messenger RNA biogenesis [BR:tbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Tb10.70.6450
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     Tb10.70.6450
SSDB
Motif
Pfam: Not1 CNOT1_CAF1_bind CNOT1_TTP_bind DUF3819
Other DBs
NCBI-GeneID: 3662742
NCBI-ProteinID: XP_822408
UniProt: Q38C90
LinkDB
Position
10:complement(405760..412740)
AA seq 2326 aa
MLYEHTTDIGSSRGAAARYLIASATKSSLQTTLQALEKIAGQSVELYRFVVSAAVSSIWT
PPQTEEKNLLVSKLVSTALEKSNALTLVSAAVDESPVTVTKESLVTLMTRDLKLTPPQQL
QFAMGLLAGSKKGKEAAAEFLNGISVAQYTVKEDVASLWSYSVLARQLGDVQALETQLSA
AAAGAAGGANDRVTVLPHDGVVDMHVSLSRIIDELGTACVATPADCRELLSLFPRPVTQV
DVADVVGFFASQGSAPTDTNTYNALMASAGREPTKVQQNAAISPFPLLELLQERVQEPVD
WDTVLRMLDKSNEGPFVRKHVSIVFDAYCKFKGTGTPGVYPPITIFLGRWSNVGRQRTVL
EYILKHPEKVSMQGLSCDQMAPIELVEVDAADAASSPTTSGASASPSTVPESRAGEVELW
RYFPFLEAAVHVASRDGAFDAETLRPAALRYPLLMLYSLLFGSFPGTMKNFSTAKLILRD
SRLPLERVATTIIPEAERRGKLNTVISLLSELTIVVPSRTIDVMEAVLKTKNAVRAFLAV
GGNPRLVTAIAMCMDESNEGGGGGANCGVSGGAGDSWISKALEGKLHFRAHAAENRFAVA
TSIVEVAEQLLDKQKYVPKATAALNTFLASSLKDLLRDVAEQARILLASTDSLFPTDVEN
DATEFYRRMYKAGDPTISASLAFIEQLLKSSKSRDKQLCACIVSIMFEECNAIGCYPHKE
LQLFATLYGQMIARELLPPNQQQRAWTLLLPVIVKPTDHLVEEYGIIALEQIKPRLAEWP
QYGRALRHVKDLDIRIPGIMAAINRGIKAEEAARQSQSRAQNQEKTTQQQKEVESLLSDP
AVLALSTERRDNMLAAEQQKDRVAAATLHQHDIGTLLSKKNITAPPRVIQEQINFIIGNT
DLHNVENNARELAKQLRPEYYEFFAEYFVVKRAALEPNYHPTYLNLLNNLQSKQLEKAIR
SATVSSIKLLLSSDKIRADPGERSLLKNLGYWLGLLTLAKNIPITAQELCFKDLIILGLR
EGKLMAVVSCIARVLHHCMDSRFFCPPNPWTMRQLCLLWEMYNLRNLRVTLRFEVDLLCK
HMNVKLEEIEQYYNMHPIHSSTQLCISDVYREINIHQSADFRVDKMELQDVVQQPHKQVQ
QPQQAAQPQLQTQAARANRPLQANAEPFKPKDSMVPSGGALAFEAVGPRRPPIVITPETV
RVSEEEASLFGERLAVYKGYLAKTLERVTQELKPTVQRSGTIAAVTACHITTKDFLFDRD
IKAQLRAADAMARSLASNLCTVAIRDALPEPFNVQVGDLISRLIDVNVPSYTERRERLKG
LIRENNMDLCVRALEWQAAEEGAKRLHEKLDKIIKEKIDQITAREPPRAPKEYHDVRDLL
MHMGEVLRPPHNLPPLQRAVYEEFNNSVPVVGLLTAYVRTLEDATVQHYSTGDAKVLSLT
SPEFANGHFGESHDVIRTRVIGISNIINAETAIYCVGPMLRKLFVLAGAMKRADSGTAAS
NDLTTARHRNVCNLLNEVYLFVLQTCYERGGDIIREELTQLYLQAEQRWSYTDLAVNLLR
IKVLNVSRFDAALSKALLAEGMGRQGVVDFAGATLSRVIVNEKLLSAKELRDTVSQLESI
ASKQDNQTPRQQQNQPKQQRHQPQSQQLPASGQDSGAMGGAQMAPGGAAPTNAMRASPAL
SNLVEQHVRRLVVPTLAPQNQEDAEKIRGLFEEWLIVNARRMHSSSSESNQASGAATNAP
SQEGATAPTTSSPASATAAPTSTTSAALPGNKPPPQYEYMMKLRDNKQLDGPQLRTFLTT
SLRFCVEHYATKSLELERSNPAVLGRALTAEWKPGNAPPHRYQYDDGLFTHVDALSDLVT
VLLYYCSLKNESRTLLTLLRRVLDAFQWALIDNHQAVVVRLQQAQNPNHLGNAKSELPAG
TAYAPMFQQQPYVRFFSNLFTTLVRADSPKRETMEQITSAFADTLHNLPPLKYPAFTFGW
LELVSHRIFLNRCLRSPVPWPSYVALLVQGLEFIERFTREGNISKNVLVFYKAFFKLMLV
LTHDYSRFLITYHYQLCDAIPPYCVQLLNTVLCSFPSGVKLPEFFARVPDDGSEMRKHPA
TDNQVKCIEESFKQHHFDGNALSEKLQDDRPMSESYMQSIVEKLQSLHNWRLMNAIVLHV
CIVYLQVNDHAVKPNFPESNAMRFYRHLAGSLDHEHRYYFICSCANHLRYPNCQTNFFVK
VISNLFLPHRSIRNAVVQQCIQEQITRVAVEKTLIIQPHPWGVLSTFMELMRAPEYGFWE
KSFICSTSFLESMFTKLRRSVESRNAQQQVQQSTGSASTSATQGKK
NT seq 6981 nt   +upstreamnt  +downstreamnt
atgttgtatgagcatactactgacatcgggagctcccgtggtgctgcggcgcggtacctc
atagcgtctgcgacgaagagttccctccagacaacgctgcaggctctagaaaagatagcc
gggcagtctgtagagttgtataggtttgttgtgtctgcagctgtctcttctatatggacg
cccccgcagacagaggaaaaaaatctccttgtctctaaacttgtgtcgacggcccttgaa
aagagtaacgcgcttacgcttgtgtcggcggctgttgatgagtcgccggtgactgtaacg
aaggagtctctggtgaccctcatgacgcgggacttgaagctcacgcccccgcagcagctg
cagtttgcgatgggtcttctggcaggcagcaaaaagggaaaggaggcggctgcggagttc
ctcaatggcatcagtgtggcgcaatacacagtgaaggaggacgtcgcaagtctttggtcc
tacagtgtcctcgcacgacaactgggtgatgtgcaagctttggagactcaactctctgcc
gcagccgcaggtgccgcaggtggcgcaaatgacagggttacagtattgccacatgatggt
gttgtcgatatgcatgtcagcctgtcaaggatcattgatgaattaggcacggcttgtgtg
gcgacgccggcagactgtcgtgagttgctcagcttgttcccccgtcccgtcacccaagtc
gatgtggcggatgtggttggtttcttcgcctcgcaagggagtgcgccaacggacacgaac
acgtataacgctctcatggcttcagccgggcgtgaaccaacaaaggtacagcaaaacgct
gccatttcaccgtttccacttttggagttacttcaggagagagtgcaggagccggtggat
tgggataccgtccttcgtatgcttgataagagtaacgagggaccgttcgtgcggaagcat
gtgtccatcgtgtttgatgcgtattgtaagttcaagggtaccggcacacccggtgtgtat
cccccgattaccatattcctcgggagatggagcaacgtcggccggcagcgcaccgtgtta
gaatatatacttaagcacccagagaaagtttcgatgcaggggctgtcgtgcgaccaaatg
gcaccaatcgagctggtagaagtggacgctgcggatgcggcttcaagtcccacgacttcc
ggtgccagtgcgtcaccgtcgacagttccggaaagccgcgcgggagaagtagagttgtgg
cgctatttccctttcctcgaagcagctgtacacgttgcaagccgcgacggtgcctttgat
gccgagacgttgcggccggcggcgctgcgctatccacttctcatgctgtattccttgctc
tttggctcgttcccaggtacgatgaaaaacttcagcaccgcgaaactgattttgagggac
tctcggcttccgcttgaacgcgttgcaactaccatcatccccgaggcagaaaggcgcgga
aagttgaacaccgtcatttctctactgtctgagctaactattgtggtcccgagtcgtaca
attgacgtaatggaggcagtgcttaagacaaagaacgctgttagggcgttccttgcggtt
ggtggcaacccgcggttggttactgctattgcaatgtgcatggatgagtccaatgaggga
ggcggcggcggagccaactgcggtgtgagtggtggtgctggtgactcttggattagtaag
gcacttgagggaaagttgcactttcgggctcacgccgcagaaaaccgctttgcagtggcc
acgtctattgttgaggtagcggagcagctgctggataaacagaagtacgtcccaaaggct
actgccgcactcaacactttccttgcttcttcactgaaggatctgctccgtgacgttgcc
gaacaagcgcgtatactcttggcatcaactgattctcttttccccactgacgtggagaac
gatgcaacggagttttacaggcgtatgtacaaggcgggcgacccgaccatctcagcatca
ctcgctttcattgagcagcttttgaaaagtagcaagagtcgtgataagcagctctgtgcg
tgcatcgtgagcatcatgtttgaagagtgcaacgctattggttgctatccccacaaggaa
ctacaactgttcgccacactttacggtcagatgatagcacgggagttgcttccgccgaac
caacaacaacgcgcgtggaccctcctgttaccggttattgtaaagcccactgaccacctg
gtggaggagtatggaatcatagcgttggaacaaatcaaacctaggctggcagagtggccg
cagtacgggcgtgctctgcgtcatgtgaaggacctcgacataagaatacctggcatcatg
gccgccattaaccggggtatcaaggcagaggaggcggctcgccagtcgcagagccgtgca
cagaatcaagagaagacgacacaacaacagaaggaagtggaatcgttgctctctgacccg
gcggtcctggctctcagcacggaacgtcgcgacaatatgttggcagcggagcagcagaag
gatcgcgtggctgcagcaacgttgcatcagcacgacatagggacgctgctgtcgaagaag
aatattacagcaccgccgcgtgttatccaggagcagatcaacttcataattggtaacacg
gatttgcacaacgttgaaaataatgcccgtgagttagcgaaacagctacgtccggagtac
tacgagttctttgctgagtatttcgtggtgaaacgtgcggcgttggagccgaattatcat
cctacttacctgaacctcctcaacaacctgcagtcgaagcagttggagaaggcgatacgc
agcgctaccgtttcttccatcaagctgctgcttagcagtgacaagatacgcgccgatcct
ggggagcgctcactgctcaagaatcttggctattggcttgggctcctaaccctagccaag
aacattcccattacggctcaggaactatgcttcaaggatttgattatcctcgggttgcgc
gagggaaaacttatggcagtagtttcatgtattgcaagagtgttgcatcattgcatggac
tcacgcttcttctgcccacccaatccgtggacgatgcggcaattatgtctcctgtgggaa
atgtataacctcagaaacctgcgggtgacactcaggtttgaggtggatcttctttgcaaa
cacatgaatgtgaaactggaggaaatcgagcagtactacaacatgcatcccatccactcc
agcacacagttgtgcatatctgatgtgtatagagaaataaacattcaccagagtgccgac
ttccgtgtggataagatggaactccaggatgtcgttcaacaaccgcataagcaagttcaa
caaccacaacaggcagcgcagccgcaattgcaaacccaggctgcccgtgccaaccgccct
cttcaggccaacgcggagccctttaagccaaaggattctatggttccgtcgggtggagca
cttgcttttgaggctgtgggcccgcgtaggcctcccatcgttatcacacctgaaacggtg
cgggtaagtgaggaagaggcgagcctttttggcgaacggcttgctgtgtacaagggatac
ctggccaaaacgcttgaaagggttacgcaggaactcaagccgacggtgcagcgttccggc
acaattgccgctgtaacagcctgccacattaccactaaggactttcttttcgaccgcgac
attaaggcgcaactccgggcagcggatgcgatggctcgttctctggcttccaacttgtgc
acagtggccatccgtgacgcacttccagagccatttaacgtgcaggttggtgatctcatc
agccgtttgattgatgttaacgtgcccagctacacggagcgccgtgagcggctgaaaggg
ctaatccgtgaaaataacatggatttgtgtgtacgtgcgcttgaatggcaggcggcagag
gaaggagcgaagcgcctgcatgagaagttagacaagattatcaaggaaaagattgatcaa
attaccgcccgtgaacccccacgagccccaaaggagtatcacgatgtgcgggatctgttg
atgcatatgggtgaggtgttgcgaccgcctcacaatttgccaccgctgcagcgggcagtc
tatgaggaattcaacaacagtgtgcccgttgttgggctgcttactgcgtatgtgcgtacg
ttggaggacgccacagtccaacactactctacgggcgacgctaaggtgctatcgctgaca
agccccgagtttgcgaacggacactttggcgaaagccacgatgttatccgcactcgggta
atcggtatttcaaacatcatcaatgccgaaacagccatctactgcgtcggcccaatgctt
cgcaagttgtttgtgcttgcaggtgcgatgaagcgtgccgatagtgggacagccgcaagc
aatgacctcactactgctcgtcacagaaatgtctgcaacctgctcaacgaggtctacctc
tttgtattgcaaacgtgttatgagcgcgggggagatattattcgcgaagaattgacgcag
ttgtatttgcaggcggagcagcgctggagctacacggaccttgcggttaatctcttgcgt
attaaggtgctcaacgtctccagattcgacgcggcgctctctaaggcactgttggctgag
gggatggggcggcaaggtgtagtagacttcgctggcgcaacattatccagggtaatcgtg
aatgagaagctccttagtgcaaaggaattgagggacacagtgtcccagctagagagcatt
gccagtaaacaggacaaccaaacgccccgccagcagcagaatcagcccaagcagcagcgg
caccagccacagtcccagcaacttcctgcgagtggacaggattcgggagcaatgggtggg
gctcagatggcgccgggaggcgcagcaccaaccaacgccatgcgagcttcccctgcgctc
tccaacttggtagagcagcatgtacggcggcttgttgtgcctacgcttgcaccccaaaat
caagaagatgcagagaaaattcgaggattgtttgaagagtggttgattgttaacgcacgg
agaatgcacagctcgtccagcgagtctaaccaggccagtggtgccgcgaccaatgctccg
tcacaggagggcgcaacagcaccgactacatcgtcccccgcttctgccaccgctgctcct
acgtctacaacatcagcggcgttaccgggtaacaaaccaccaccacagtatgagtacatg
atgaagttacgagacaacaagcagcttgacggcccgcaacttaggacgttcctcactacg
tcactacgcttctgtgttgaacactacgccaccaagtcgttggagttggagcgctccaac
ccggcggtactcggccgtgctttgaccgctgaatggaagccaggcaacgctccaccccat
cgttaccagtacgatgacgggcttttcacacatgtggatgccttgtctgacctagtgaca
gtgttgttatattactgctcgttgaagaacgagtcgcggacacttcttacgttactcagg
cgggttctggatgcgttccaatgggcgctcatagataatcatcaggcggtcgttgtacgt
ttacaacaggctcagaaccccaatcaccttggaaatgcaaagtctgagcttcccgctggc
accgcctacgcaccgatgttccaacaacaaccctacgtgcgcttcttcagtaatctcttt
accacgctcgtgcgtgcggattcgccaaagcgtgagacgatggagcaaatcacaagtgct
tttgctgatactcttcataacctcccgccactcaaatatcctgcgttcacttttggatgg
ctggagcttgtgagtcaccgtatattcctcaaccgctgtctacgttcgcctgtgccctgg
ccctcctatgttgcgctgttagttcaggggctcgagtttattgagcgcttcacgcgtgaa
ggaaatatttccaaaaacgtactcgtgttctacaaggcgttcttcaagctgatgttggta
ctcacacacgactactcacgctttcttattacgtatcactaccagttgtgtgacgccatc
ccaccgtactgtgtgcagttgctaaacactgttttgtgctccttcccgtcgggtgtgaag
ttaccggagttctttgcgcgtgtgccagacgatggctcggagatgcggaagcaccctgcg
accgacaatcaagtaaagtgtattgaggagagtttcaaacagcaccacttcgatggaaac
gctttgtccgagaaattgcaggatgaccgaccaatgtccgagtcttacatgcaaagtatt
gtggagaagttgcagtcgttgcacaactggcggctgatgaatgccatcgtactgcacgtt
tgcattgtgtacttgcaggtaaacgatcatgctgtgaagcccaactttcctgaatccaac
gctatgcgtttctaccgccaccttgcgggctcattggaccacgaacaccgctattacttt
atctgttcctgcgctaaccatctgcgttacccgaactgtcaaacgaacttcttcgtgaag
gttatatccaacctcttccttccccaccgatccattcgcaacgccgtggttcagcagtgc
atccaagagcaaatcactcgtgtggcggtggaaaaaacactcatcattcaaccgcatccg
tggggagtactcagtacattcatggagctcatgagggccccagagtatggtttctgggag
aagagttttatatgcagtacatctttcttagagagtatgttcacaaaactgcgacgctca
gtggagtcccgaaacgcccagcaacaggtgcagcaatcgaccggatctgcttccacctcc
gcaactcaaggcaagaagtag

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