Trypanosoma brucei brucei: Tb11.03.0400
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Entry
Tb11.03.0400 CDS
T01013
Name
(RefSeq) DNA repair protein, putative
KO
K15083
DNA repair protein RAD16
Organism
tbr
Trypanosoma brucei brucei
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbr03400
]
Tb11.03.0400
DNA repair and recombination proteins [BR:
tbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
Tb11.03.0400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-PARP
zf-RING_2
ResIII
ERCC3_RAD25_C
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
3665848
NCBI-ProteinID:
XP_828168
UniProt:
Q387H5
LinkDB
All DBs
Position
11
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AA seq
984 aa
AA seq
DB search
MTSKHSAVLTITEKGDWRTAKNGEKVWRYMVQTAPTMRARCRKCSQPILKGDLKWGTPIR
HSHGAYGWITAWHHVGCTRIAERKGFSDIVHGIDLLPPEKRAQVVAEVTSDSMPEHLLPL
NPDDLVKKPLLPETEAPAELLRPLLRYQKEGLGWMVSQELSQVKGGILADEMGMGKTIQM
ISLFLARRLVGPTLVVCPVSSMLQWESEVKDHVVSGSLSVVVVSRTKNVRRDDIQNADVV
LTTYPMLEQSWRELVNKKRVPCPYCQQLYLPRQLVVHNRYFCGPHAKKTSKQAKREKRQG
GTGSSPTRKVQAKETIMKGLRTLRVDVDDNAEEGEDSVFEEGPRGVVGPMGLYRELMVEA
GRKVRSRWDPAYVGSDSSGDTNNSTTESSTSSERDDSEEVLSKEEVADDKLSSFRCLHCG
FQLLRYPFCPKIGQCHVLSDYMKQIIETDDGSDGVDLSQSVFHSVTWSRIVLDEAHRIKG
SNTSTSRAAFALVGEHRWCLTGTPLQNRVGDVYSLVRFLRLAPYARYYCGTEGCSCSSFS
HPFSGNDLRHCIFCGHGPVQHYAYFNRHILNPIIRYGYVGDGRRGMMMLSNEILQKCMLR
RTKAERASDLHLPPMTVETFQVKLTDEERSFYESLYKKSTAAFDTFVEKGTVLHNYAHIF
QLLSRLRQALDHPLIVINSMNVGGSSCSKGMCGICTESCGENSVQVDPCKHTFHRICLSQ
FVESQPLKEYNCPVCYVAINIDLRSLHSGWDEDGAQPVLPPELVHSDNESDENNVEEESK
GRKLDDSAEGKSARARSVKKRGILSRIDSSKPLRGTKLDAITEYICSIPEEEKVIVFSQF
GDTLDLIQLWLQKVKVKTVKLVGSLMLSQRQAVLRAFLHDKSVRAILISLKAGGEGLNLQ
IANHVVLVDPWWNPAVEMQAAQRAHRIGQTRPVRVVRFVTERSVEERMLELQEKKMLVIE
GTIDGKVSSLQSLSEDDLQFLFTR
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcaaacatagtgctgtattaactataaccgaaaagggtgattggagaactgcg
aaaaatggcgagaaggtatggcggtatatggtgcaaacggcaccgacgatgagagctcgc
tgcagaaaatgttcacaacctattttaaaaggtgacctgaaatggggaactcctatacgt
cattcccatggagcgtatgggtggattaccgcctggcatcatgtggggtgtacgagaatt
gctgaacgtaagggctttagtgacatagtacatggaatagacttacttccacctgagaaa
cgggcgcaggtcgttgcggaggtgacatccgactcgatgcctgagcatttactacctttg
aatcctgacgatttagtaaaaaaacctcttcttcccgaaactgaagcaccagctgagttg
ctaagaccacttcttcgttatcaaaaggagggtcttggctggatggtgtcacaggagttg
tctcaagttaaggggggaatattggctgatgaaatgggtatgggtaaaacaatccagatg
atcagtctttttctcgcccgtcgcctcgtgggacctacactggttgtttgcccagttagt
tcaatgctccagtgggaatctgaggtgaaagaccatgtggtgtccggttccctttcggtg
gtagtggtgagccgtaccaaaaatgtgagaagggatgatattcaaaatgctgatgtggtt
ttgactacgtatccgatgctcgaacagtcttggagggagctagtcaacaagaaaagagtt
ccatgcccttactgccaacagctttatttgccgcggcagcttgttgtgcacaatcggtat
ttttgcgggcctcatgcaaagaaaacttctaaacaggcgaagcgtgaaaaacgacaaggt
ggcactggttcttctcccactcgaaaagttcaagcaaaagaaacgattatgaaggggctt
cgtacgttgcgtgtcgatgttgacgataacgcggaggaaggggaggattctgtgttcgag
gaaggaccacggggtgttgttggaccaatgggcttgtatcgtgagctcatggttgaggcc
gggcgcaaagttaggagccgttgggaccccgcgtacgtgggaagtgacagcagtggggat
accaacaattctaccacagaaagttccacctcatcggaacgggatgactcagaggaggtg
ttgtcgaaagaggaggtggccgatgacaagcttagctcgttccggtgcttgcactgcggg
tttcagttgctacgatacccgttttgccctaagatagggcaatgtcacgttctctctgat
tatatgaaacaaataattgagactgacgacggtagtgacggcgttgacctatctcaatca
gttttccactcggtaacctggagtcggattgttctggacgaagctcatagaataaaaggt
agcaacacaagtacgtcaagggctgcctttgccttggtaggtgagcacaggtggtgcctc
acgggaacccctctacaaaatcgtgtaggggatgtgtacagcctggttcgttttctacgg
ttggcgccttatgcaaggtattattgtggaactgaggggtgctcctgctcgtccttttct
catccattttctggaaatgatttacgacactgtatattttgtggtcatggaccggtccaa
cattatgcttattttaatcgccatattttaaatcctataatacgttatggttacgttggc
gacggcaggcggggaatgatgatgctctctaatgaaatcctccagaagtgtatgctgagg
aggacgaaggccgaaagagcaagcgacttgcacttgccgccaatgaccgtggaaacgttc
caagtaaagctgaccgatgaggagagaagcttctatgagtcgttgtacaaaaaaagcact
gccgcttttgatacctttgttgagaaaggaacggtgcttcataactatgcccacatcttt
caacttttgagtcgtttgaggcaggctttggatcacccactgattgtcattaattctatg
aatgtcggtggctcgtcgtgctcgaaggggatgtgtggaatttgcactgagagttgtgga
gagaactcagtacaggttgacccttgtaagcataccttccaccggatttgtctttcgcaa
tttgtcgaaagccaacctttaaaggaatataattgccctgtgtgttatgtggctatcaac
atcgacctgcggagtctacactcagggtgggacgaagacggtgcccaacctgttcttcct
ccagagttagttcactcagacaacgaaagcgatgaaaacaacgttgaggaggaaagtaaa
gggaggaaactagatgattctgcggaggggaaatccgctcgagcgagatcggtcaagaaa
cgaggcatactctcccggattgattcatcaaaacctcttcgagggacgaaactggatgcc
ataacagaatacatttgcagcattccagaggaggaaaaggtaattgtgttttctcaattt
ggggatactctggacctcattcagttgtggttacagaaggtgaaagtaaagacggtgaaa
cttgtggggtcgctcatgttatcgcagcggcaagcggttctcagggctttcttgcatgat
aagagcgttcgagccatccttatttctctcaaggccggtggggagggtttaaatttacaa
attgctaaccatgttgtacttgttgatccttggtggaatcccgcggttgaaatgcaggcg
gcgcagcgagcccatcgtattgggcagacgcgacccgttcgcgtggtccgttttgtcact
gaacgttctgtagaggagcgcatgttggagttacaagaaaagaagatgctggttattgag
gggactatcgatggtaaggtaagttcgctgcagagtcttagcgaggatgatcttcagttt
ctgttcacgaggtag
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