KEGG   Trypanosoma brucei brucei: Tb927.3.1920
Entry
Tb927.3.1920      CDS       T01013                                 
Name
(RefSeq) hypothetical protein, conserved
  KO
K12580  CCR4-NOT transcription complex subunit 3
Organism
tbr  Trypanosoma brucei brucei
Pathway
tbr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tbr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Tb927.3.1920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tbr03019]
    Tb927.3.1920
Messenger RNA biogenesis [BR:tbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Tb927.3.1920
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     Tb927.3.1920
SSDB
Motif
Pfam: Not3 NOT2_3_5_C ATG17_like
Other DBs
NCBI-GeneID: 3656130
NCBI-ProteinID: XP_843786
UniProt: Q57ZB9
LinkDB
Position
3:complement(505714..507528)
AA seq 604 aa
MTNNKKSQQEIERLLRRTQEEINSYDSVYTKFNNSTSPQREKLEAELRREARKLQRSYDL
IKATCPPSDSKDSKGSVEPWMQKLHERIETFKMCEQAMKTKGSGKDGLGTGALSEAQQEG
VKDVEAWLKNTTDSLRKQVQLSESDAERSGRGNHGRNKNSVSATTSTRTQKLKFHVARLE
LLLKGIANGDVNPESVYGIKERVEAIKRGDTNGSDDDDNNEDEDLYAQFGFDEQLVSERR
RGGSTVGEDEDAASPNSRNPNNKLSPVRMGGTKSNTPSSSAKMSGPTSSDARKGPGSATA
NRMDGAKRLGSGSPSPHKGNTSITSTVGGRDGLHDNWDENADFPEDDMDKMNDDTFGDDA
MAMVGTGSLADMARATSTGSRLGDWEKGRPASLVSPPSTTSKKSNLEQPAAAAPSQASGM
ASMSPSSANTAATGETRQLSAAPASHVSPAPVSTAHDDFLDRNTMLQLIDMSLANLPHTQ
DVDRQRPFEPSNPTVHVPFFPQQVLPALASPEIYRTFELETLFFIFYYHQNTYQQYCAAG
QIKERSFRYHTQLNTWFKRNGPPKESLEGSERGSFQFFNFEEGWNLEEKEDFVFDYKYLE
NELR
NT seq 1815 nt   +upstreamnt  +downstreamnt
atgacaaataataaaaagagtcaacaggagatcgagcggctccttcgccgtacacaggag
gaaattaacagctacgatagtgtttacacgaagttcaacaacagtacgtcaccccagagg
gagaaactagaggccgaactcagaagggaggctaggaagcttcaacgcagctatgactta
ataaaggccacttgcccaccttcggactccaaggactcgaaagggagcgttgagccgtgg
atgcaaaaacttcacgagaggatcgaaacgtttaagatgtgtgagcaggcgatgaaaacg
aagggatctgggaaagatgggttaggcactggtgccttgagcgaggcgcagcaggaagga
gtaaaggatgtggaggcatggctcaagaacacaacagatagtttgcggaagcaagtgcag
ctctccgagtcggatgcggaacgcagtgggcgtggaaaccacggacgtaataagaattct
gtgtctgcaaccacttcgacccgtacgcaaaaacttaaatttcacgtagcacgccttgag
ttgctcctcaaaggtatcgcaaacggagatgtaaaccccgaaagtgtttacggaatcaaa
gagcgtgtagaggcaatcaaacgtggtgataccaacggcagcgacgatgatgacaacaat
gaagatgaagacctgtacgcccaatttggtttcgacgagcagttagtttcagagaggcga
cggggtggtagcacggttggggaggatgaggatgcggcttctcctaattcccgcaaccca
aataacaaactgagtccggtgagaatgggagggacaaaatccaatacaccttcttccagt
gcgaagatgagcggtcccacttcctctgatgccaggaaaggccccggttccgcaacggca
aacagaatggatggggcgaagcggttgggttccggaagcccgagcccacacaagggaaac
acctcaataacatcgacggtaggtggcagggacgggttgcacgacaactgggacgaaaac
gcagattttccggaagacgacatggacaaaatgaacgacgacaccttcggcgacgatgcg
atggccatggttgggaccggttctttagcagatatggcgagggcaacgagcaccggttca
cggctgggtgattgggagaagggccgacctgcaagtctcgtgtcgccaccttccactaca
agtaagaagtcaaaccttgagcaacctgcggcagcggctccatctcaggcatccgggatg
gcttccatgtctcccagcagtgccaacaccgccgctactggagaaacgaggcaactcagc
gctgcacccgcttcccatgtttcccccgcaccggtttcaacagcacacgatgattttttg
gacaggaacaccatgctgcagcttattgacatgtccttagcaaacttgccacatacgcag
gacgttgaccggcaacgtccatttgagccctccaatccaacagtgcacgttccttttttt
ccacagcaggttctcccagcgttagcttctccggagatttaccggacatttgagcttgag
acccttttctttatcttttactatcaccagaacacgtatcagcagtattgtgccgcggga
caaattaaggagcgttccttccgttaccacactcaactcaacacttggtttaagcgaaat
ggtcccccaaaagaatctctggaggggagcgagcgcgggtcgtttcagttcttcaacttt
gaggaaggctggaatttggaagaaaaagaagacttcgtttttgattacaaatacctcgag
aatgagctgcgttga

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