Trypanosoma brucei brucei: Tb927.3.1920
Help
Entry
Tb927.3.1920 CDS
T01013
Name
(RefSeq) hypothetical protein, conserved
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tbr
Trypanosoma brucei brucei
Pathway
tbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tb927.3.1920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbr03019
]
Tb927.3.1920
Messenger RNA biogenesis [BR:
tbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Tb927.3.1920
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
Tb927.3.1920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
ATG17_like
Motif
Other DBs
NCBI-GeneID:
3656130
NCBI-ProteinID:
XP_843786
UniProt:
Q57ZB9
LinkDB
All DBs
Position
3:complement(505714..507528)
Genome browser
AA seq
604 aa
AA seq
DB search
MTNNKKSQQEIERLLRRTQEEINSYDSVYTKFNNSTSPQREKLEAELRREARKLQRSYDL
IKATCPPSDSKDSKGSVEPWMQKLHERIETFKMCEQAMKTKGSGKDGLGTGALSEAQQEG
VKDVEAWLKNTTDSLRKQVQLSESDAERSGRGNHGRNKNSVSATTSTRTQKLKFHVARLE
LLLKGIANGDVNPESVYGIKERVEAIKRGDTNGSDDDDNNEDEDLYAQFGFDEQLVSERR
RGGSTVGEDEDAASPNSRNPNNKLSPVRMGGTKSNTPSSSAKMSGPTSSDARKGPGSATA
NRMDGAKRLGSGSPSPHKGNTSITSTVGGRDGLHDNWDENADFPEDDMDKMNDDTFGDDA
MAMVGTGSLADMARATSTGSRLGDWEKGRPASLVSPPSTTSKKSNLEQPAAAAPSQASGM
ASMSPSSANTAATGETRQLSAAPASHVSPAPVSTAHDDFLDRNTMLQLIDMSLANLPHTQ
DVDRQRPFEPSNPTVHVPFFPQQVLPALASPEIYRTFELETLFFIFYYHQNTYQQYCAAG
QIKERSFRYHTQLNTWFKRNGPPKESLEGSERGSFQFFNFEEGWNLEEKEDFVFDYKYLE
NELR
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgacaaataataaaaagagtcaacaggagatcgagcggctccttcgccgtacacaggag
gaaattaacagctacgatagtgtttacacgaagttcaacaacagtacgtcaccccagagg
gagaaactagaggccgaactcagaagggaggctaggaagcttcaacgcagctatgactta
ataaaggccacttgcccaccttcggactccaaggactcgaaagggagcgttgagccgtgg
atgcaaaaacttcacgagaggatcgaaacgtttaagatgtgtgagcaggcgatgaaaacg
aagggatctgggaaagatgggttaggcactggtgccttgagcgaggcgcagcaggaagga
gtaaaggatgtggaggcatggctcaagaacacaacagatagtttgcggaagcaagtgcag
ctctccgagtcggatgcggaacgcagtgggcgtggaaaccacggacgtaataagaattct
gtgtctgcaaccacttcgacccgtacgcaaaaacttaaatttcacgtagcacgccttgag
ttgctcctcaaaggtatcgcaaacggagatgtaaaccccgaaagtgtttacggaatcaaa
gagcgtgtagaggcaatcaaacgtggtgataccaacggcagcgacgatgatgacaacaat
gaagatgaagacctgtacgcccaatttggtttcgacgagcagttagtttcagagaggcga
cggggtggtagcacggttggggaggatgaggatgcggcttctcctaattcccgcaaccca
aataacaaactgagtccggtgagaatgggagggacaaaatccaatacaccttcttccagt
gcgaagatgagcggtcccacttcctctgatgccaggaaaggccccggttccgcaacggca
aacagaatggatggggcgaagcggttgggttccggaagcccgagcccacacaagggaaac
acctcaataacatcgacggtaggtggcagggacgggttgcacgacaactgggacgaaaac
gcagattttccggaagacgacatggacaaaatgaacgacgacaccttcggcgacgatgcg
atggccatggttgggaccggttctttagcagatatggcgagggcaacgagcaccggttca
cggctgggtgattgggagaagggccgacctgcaagtctcgtgtcgccaccttccactaca
agtaagaagtcaaaccttgagcaacctgcggcagcggctccatctcaggcatccgggatg
gcttccatgtctcccagcagtgccaacaccgccgctactggagaaacgaggcaactcagc
gctgcacccgcttcccatgtttcccccgcaccggtttcaacagcacacgatgattttttg
gacaggaacaccatgctgcagcttattgacatgtccttagcaaacttgccacatacgcag
gacgttgaccggcaacgtccatttgagccctccaatccaacagtgcacgttccttttttt
ccacagcaggttctcccagcgttagcttctccggagatttaccggacatttgagcttgag
acccttttctttatcttttactatcaccagaacacgtatcagcagtattgtgccgcggga
caaattaaggagcgttccttccgttaccacactcaactcaacacttggtttaagcgaaat
ggtcccccaaaagaatctctggaggggagcgagcgcgggtcgtttcagttcttcaacttt
gaggaaggctggaatttggaagaaaaagaagacttcgtttttgattacaaatacctcgag
aatgagctgcgttga
DBGET
integrated database retrieval system