KEGG   Trueperella bialowiezensis: NCTC13354_01183
Entry
NCTC13354_01183   CDS       T05959                                 
Symbol
ygbT
Name
(GenBank) CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI
  KO
K15342  CRISP-associated protein Cas1
Organism
tbw  Trueperella bialowiezensis
Brite
KEGG Orthology (KO) [BR:tbw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tbw03400]
    NCTC13354_01183 (ygbT)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tbw02048]
    NCTC13354_01183 (ygbT)
DNA repair and recombination proteins [BR:tbw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     NCTC13354_01183 (ygbT)
Prokaryotic defense system [BR:tbw02048]
 CRISPR-Cas system
  Universal Cas proteins
   NCTC13354_01183 (ygbT)
SSDB
Motif
Pfam: Cas_Cas1
Other DBs
NCBI-ProteinID: VEI13468
UniProt: A0A3S5EW33
LinkDB
Position
1:complement(1274218..1275156)
AA seq 312 aa
MASGPSSKPIDRLLLTRMENRLSFLYVERAVINRDGNALTIQDERGIVHVPATQIGVVLM
GPGTKVTYAAMALLGDAGTSVVWVGEKGVRYYAHGRPAAKTAKFAEAHAKIWSNQRSRLR
CARRMYAKRFPGENIKTFTMAQLRGREGARMKTIYAVEAQRTGVPWTKRSYDPNDFDSGD
PINRALTEASAALYGIAHAVIVGLGCIPSLGIIHSGTDRSFVFDIADLYKAEIAIPAAVE
AVAASAEGDDLNVRRRVRDKVVSARLMQRMTRDLQELMELPEEDSYADVDLFLWSELEPV
PAGTNWDFGALQ
NT seq 939 nt   +upstreamnt  +downstreamnt
atggcatcaggcccgagcagcaaaccgatcgatcgccttcttctcacaagaatggagaac
cggctttccttcctttacgttgaacgggccgtgatcaaccgagacggtaatgcgcttact
atccaagacgagcgcggaatcgtccacgtaccggccacccagatcggcgtcgtcctcatg
ggccctggaaccaaggtgacctatgcggcgatggcgttgctgggtgacgccggtacgtcg
gtggtgtgggtaggcgagaagggggtgcgatattatgcgcacgggcgccccgccgcgaaa
accgcgaagtttgctgaagcccacgcaaaaatctggtcgaatcagcgttcgagattgcgg
tgtgctcggcggatgtacgcaaaacgctttcccggcgagaacatcaaaaccttcacgatg
gctcagcttcgcggccgagaaggcgctcggatgaagacgatctatgcggtagaagcgcag
cgcacgggagttccctggacgaagcgttcctacgatcccaatgatttcgattcgggagac
cccatcaaccgcgcactgacggaagcatccgctgctttgtacggcatcgcgcatgccgtg
attgtagggctcggttgtattccctcgttgggaatcattcactcgggcacggatcgctct
ttcgttttcgacattgccgatctttacaaggcagagatcgctataccggctgcggttgaa
gcggtggctgcgtctgcagaaggcgacgatctgaatgtacgacgccgggtacgagacaag
gttgttagtgctcggctgatgcagcgaatgactcgggatttgcaggaactcatggagctg
ccagaagaagattcgtatgcggacgtagatctgtttttgtggagcgaactcgaacctgtt
cccgctggaacgaattgggatttcggggcgctgcaatga

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