Tribolium castaneum (red flour beetle): 663570
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Entry
663570 CDS
T01046
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
663570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
663570
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
663570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_19
TPR_8
TPR_14
TPR_12
TPR_17
TPR_CcmH_CycH
TPR_11
ANAPC3
TPR_7
TPR_6
ARM_TT21_C
TPR_10
ARM_TT21_5th
SRP_TPR_like
ChAPs
TPR-S
Alkyl_sulf_dimr
Fis1_TPR_C
NRBF2_MIT
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
663570
NCBI-ProteinID:
XP_008195456
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All DBs
Position
LG7:complement(3801223..3809525)
Genome browser
AA seq
1267 aa
AA seq
DB search
MKDSKLVLKEARDAIKNKNYETALKLCKQILKEEKNNYMALVFLGVSLQETGQNAKALKA
FQEAIEANPSNPLAWNGLINYYEKIDTKETKLDLINAYISLIGIETGEKKILECVQKLAN
LCEFGDLAKIVTAIFSVLKEGKCDSAECAVCLINILSKIENLAPDLVPIYEETLKLALNN
QKTVCTKYFSDYLNLLYKQDKAGELLQQAKKMHEMFESDWISLRWICKIFNEVYVESGTL
IESVENMANYSESLSKLEAPSATGLFTQSILLVEQKKIIEAKDVLEQVVGVLPGLVHAWV
LLLKCCMQLLLYDEAINAANKLEKLLQNKKILKKSVNVLMVEVLSRSEEEADLRKALQLF
ENIETEVKSACNQHLIRANINLKKFTEAKSLLQEFNSTDKTHILLKAQLLHKQEKFSEAL
EILERENCESCEWWLEIGSLYWDCGHFDKSLIPFLKATKLDPNNYKCFLFLGHFYKRNND
FDKARRCYEKAFKINKRCAEAGIELSKIYRKLKNWDANLNLLQALTSGIINAKNSWAWMQ
LGLHHLEQLDYDKAVTNLRFVIRIDENNAHCWESLADAYLAKGAYTSALKCYEKTSSLVS
EAWYPMLQKGHIKQILGEFAEARLEFEEILKFNKFYVPALKGMAETCLLQARHCYKDQRL
GTSRDHAQVATDHLIRALSQRGDLSCLWKLLGNGCLFVANLPEKHSCLLIAKKFVEGRDV
VGDTVLEKSDLFALAARCFFKSLGLVEDNFLIWHDLAVCYLSHGLSSGSSELITKAQTIL
QHCTANNPTYWPHWNLLGNVAMHLNPPNYKFAQHCFIKAVIADSHSAVSWTNLGTLYFLL
GDFKLANQAFSQAQRSDPNYVNSWIGQALLAETLAHEDAMDLFRHSTQLRVHKQGALGYA
HWVCKTLKESPVDTVVYSIHNMHAVPVACDVITWYTEHDPMNATAWNMLGILKERMGLKL
GALEAFKNALTLSDKKQRDLARVNYGRLLAALGKYQQAVDSFTKVEAATFNSGSGLALAL
FKDKLYKESYEVYESTLHWLSDDSNLQSNLLVALASMAYMFEGPEAAKTLLFQSIQLENP
SPWGFYAISSLGLLHDDFNLTDLVLSELKKIISRSCGPHFAVLASYFHLLQGKNKQSVCE
VSKIVFMYPDQAPVWATLSSVLIRVGKDAKAAANCAQIAMKLGQATNTNVTKILCLVALS
FLIVGDTAKALLMAQKAIHCYPNLAEGWAVFIAALVRSKRTNRVPEFLKIAQQLNPCEKL
KLWMDKI
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgaaagactcaaaattagtgttgaaggaggcacgagatgccatcaaaaacaagaattat
gaaactgccttgaaactatgcaagcaaatactgaaagaagaaaagaacaattacatggcc
cttgtcttcctgggagtctcattacaggaaaccggtcaaaacgccaaagctttgaaagct
ttccaggaggcaatcgaagcaaacccttcaaatcccttggcttggaacggtcttataaat
tattacgaaaaaatcgacactaaagaaactaaacttgatttaattaatgcttacatttcg
ctaattggcattgaaacaggcgagaaaaaaatcctcgaatgtgtccaaaaactggcaaat
ttgtgcgaattcggcgacttggctaaaatcgtaacagcgattttttcagtcctgaaagag
ggcaagtgtgacagtgcggaatgtgcagtttgtttgattaatattttatcaaaaattgaa
aatctcgcaccggatttggtcccaatttacgaagaaacgttaaaactcgccttaaacaac
caaaaaaccgtatgtacgaaatatttcagcgattatttaaacctgttgtataagcaagac
aaagcgggtgaattattacaacaggcgaaaaaaatgcacgaaatgtttgaatcagactgg
atttctttgcgttggatttgtaagattttcaatgaggtttacgtcgagtccggcactttg
atcgaatcggtcgaaaacatggccaattacagcgaaagtctctctaaattggaggcacct
tcagctacgggtctattcacccaaagcattttactagttgaacagaaaaaaattatcgaa
gcgaaagatgttttagagcaagttgtgggggttttacccgggttggtacacgcgtgggta
cttttgctaaaatgttgtatgcaactcctgttgtacgacgaagccataaatgcggcaaac
aaactcgagaaactgttacaaaataagaagattttgaagaaaagtgttaatgttttgatg
gttgaggttttgtcccggtcggaggaggaggccgaccttcgcaaagcgttacaattattt
gaaaatattgaaactgaggtgaaatctgcgtgcaatcaacacttgattcgtgcaaacatc
aatctaaaaaaattcaccgaagctaaatcgttactccaagaattcaattctactgataaa
acacacattttgctcaaagcccagttgctccacaagcaggaaaaattttccgaagctctg
gaaattctagaaagggaaaattgcgagtcttgtgaatggtggctcgaaatcggttcgctt
tattgggattgtggccactttgacaaaagtctgatcccatttttgaaggccaccaaattg
gacccaaataactacaagtgtttcctgtttttgggccatttctacaagagaaacaacgac
tttgataaagctagacgatgttacgagaaagctttcaaaattaataagcgatgtgcggag
gccgggatcgaactaagcaaaatctaccgcaagttaaaaaattgggacgccaacttgaac
ttgttacaagccctcacaagtggaataattaacgctaaaaattcctgggcttggatgcag
ctagggctacaccacttggaacaattagattacgataaagccgttacgaacttgcgattc
gtcatacgaattgacgaaaacaatgctcactgctgggaatccctggctgacgcctacttg
gccaaaggtgcctacacttccgctttgaaatgttacgagaaaacgtcgagtttggtgtcg
gaagcgtggtatccgatgttacaaaaagggcacattaagcagattttgggcgaatttgcc
gaagcgcggctcgagtttgaggaaattttaaaatttaacaagttttacgtcccggctttg
aaaggcatggctgagacttgtctgcttcaagcgaggcattgttacaaggatcagagactg
gggacgagtcgggaccatgctcaggtggccaccgatcacttgattcgggctctgagccaa
cgtggcgacctctcgtgtttgtggaaattgttagggaacgggtgtttgttcgtggccaat
ttacctgaaaaacattcgtgtcttttgattgcgaaaaagttcgttgaagggagggacgtt
gtgggtgatacggttctagagaaaagtgatttattcgcgttggctgcgcgctgttttttc
aaaagtttgggtctagttgaggataattttttgatttggcacgatttggccgtttgttat
ttatcgcacgggcttagtagcggttcaagcgagttaattactaaagctcaaactattttg
caacattgcacggctaataatccgacgtattggccacactggaatttattaggcaatgta
gcgatgcatctaaaccctccaaattataaattcgcgcaacattgtttcattaaagccgtt
atcgctgatagtcacagtgccgtctcgtggacgaatttaggcactttgtattttctcctc
ggtgattttaagctggcaaatcaggcgttttcgcaagctcaaagatcggaccctaactac
gttaacagttggataggacaggcacttttagccgagactttggcacacgaagacgctatg
gatttgtttaggcacagcacccagttaagggtccacaaacagggggctttggggtacgca
cattgggtgtgcaaaacgttgaaggagtcgccggtggacaccgtcgtctattcgatacac
aacatgcatgcggtccctgtggcttgtgatgtaatcacctggtatacggaacatgatcca
atgaacgccacagcgtggaacatgctgggaattctcaaagaacgaatgggtctcaaactg
ggtgctttggaggctttcaaaaacgccctaactttatccgataaaaaacagagagacttg
gcccgagtcaactacggccgattactggccgctttgggcaaataccagcaagcagtcgat
agttttacaaaagtcgaagctgcgactttcaacagcggaagcggcctagcgctcgcgctc
ttcaaagacaaactttacaaagaatcgtacgaagtgtacgaatccactttacattggctg
tctgacgattctaatttacagtcgaatttattggtggctttggcctcaatggcctacatg
ttcgaggggcctgaagcggccaaaactctgttgtttcaaagtattcagcttgagaatccg
tcaccgtgggggttttacgcgatttcgtctttgggtttgctccatgatgatttcaatctg
actgacttggttttaagtgagttgaaaaaaattatttcgaggagttgtgggccacatttt
gccgttttggcgagttatttccacttgttacaaggtaaaaataagcaaagtgtgtgtgag
gtgagcaaaattgtgtttatgtacccggaccaagcgccagtttgggcaactctttcgtcg
gttttgattcgagtggggaaagatgccaaagcggctgccaattgcgcccaaattgccatg
aaattaggccaagcgactaatacaaacgttactaaaattttgtgtctcgtggctttgtcg
tttcttatcgtaggtgacacggcaaaagcgctcttaatggcccagaaagccattcattgt
tacccgaatttggccgaaggttgggcggtttttatagcggccttggtgcgctccaaacga
accaatcgagtcccagagtttttaaaaatcgcacagcagttgaatccttgtgaaaaatta
aaactctggatggataagatttga
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