Trinickia caryophylli: U0034_00510
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Entry
U0034_00510 CDS
T09722
Name
(GenBank) sugar ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
tcar
Trinickia caryophylli
Pathway
tcar02010
ABC transporters
tcar02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
U0034_00510
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
U0034_00510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_00510
Transporters [BR:
tcar02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
U0034_00510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
NYN
dGTP_diPhyd_N
Tad_C
Motif
Other DBs
NCBI-ProteinID:
WQE11948
LinkDB
All DBs
Position
1:complement(115339..116307)
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AA seq
322 aa
AA seq
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MNRRIRRRLIAAAAVLAAVAATPFSVGDAVAQSAKKPKVALVMKSLANEFFLTMEEGAKD
YQKHNANKFDLITNGIKNETDTAAQINIVEQMINSKVDAIVLAPADSKALVPVVKKAIDA
GIIVVNIDNRLDPEVVKSKGVKVPFVGPDNRKGARKVGEALARRLKAGDQVGIIEGVSTT
TNAQQRTAGYKDAMEKAGAKVVSVQSGDWEIDKGNAIAAAMLNQYPDLKALLCGNDNMAI
GAVSAVRAAGKQGKVYVVGYDNINAVKPMLKSGRVLATADQFAAKQAVFGIDVALKALEE
HKKQGELSDVVETPVELVTKGK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtcgtattcgtcgtcgcctgatcgccgcggcggccgttttggccgccgtcgcc
gccacgccgttttcagtcggcgacgctgtggcgcaaagtgccaaaaagccgaaggtggcg
ctcgtcatgaaatcgctcgccaacgaattcttcctgacgatggaagagggcgccaaggac
taccagaaacacaacgcgaacaagttcgatctgattacgaatggaatcaagaacgaaacg
gacaccgccgcgcagatcaacatcgtcgagcagatgatcaattcgaaggtcgatgcgatc
gtcctcgcaccggcagactcgaaggcgctcgtgcccgtcgtcaagaaggccatcgacgca
ggcatcatcgtcgtgaacatcgacaatcgtctcgatcccgaggttgtgaagtcgaagggc
gtaaaagtaccgttcgtcggtccggacaatcgcaagggcgcgcgcaaggtgggcgaagcg
ctcgccaggaggctgaaggcgggcgaccaggtgggcatcatcgagggggtctccacgacg
acgaacgcgcagcagcgcacggcagggtacaaggacgccatggagaaggcaggggcgaag
gtcgtttccgtccaatcgggcgattgggaaatcgacaagggcaatgccatcgccgccgcc
atgctcaaccagtatccggacctgaaggcgctcctgtgcggcaacgacaacatggcgatc
ggtgccgtgtcggccgtccgggcggccggcaagcaaggcaaagtctacgtggtcggctac
gacaacatcaatgccgtaaagccgatgctcaagagcgggcgggtactcgccacggccgat
cagttcgccgcgaagcaggcggttttcggaatcgacgttgcgctgaaggcgctcgaggag
cacaagaaacagggtgaattgtccgacgtcgtcgagacgcccgtcgaactcgtcacgaag
ggcaagtaa
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