Trinickia caryophylli: U0034_01700
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Entry
U0034_01700 CDS
T09722
Symbol
lpxB
Name
(GenBank) lipid-A-disaccharide synthase
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00540
Lipopolysaccharide biosynthesis
tcar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
U0034_01700 (lpxB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tcar01005
]
U0034_01700 (lpxB)
Enzymes [BR:
tcar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
U0034_01700 (lpxB)
Lipopolysaccharide biosynthesis proteins [BR:
tcar01005
]
Lipid A
U0034_01700 (lpxB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LpxB
Epimerase_2
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
WQE12167
LinkDB
All DBs
Position
1:complement(383191..384360)
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AA seq
389 aa
AA seq
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MASPTSALRVAMVAGEPSGDLLAAALLGGLARRLPADTRYYGIGGPRMAAQGFDAHWPME
KLAVRGYVEALRHIPEILRIRRDLRHQLLAERPHVFVGVDAPDFNFGLEEPLRAAGIPTI
HFVCPSIWAWRGGRIKKIARAVDHMLCVFPFEIELLEKAGVAATYVGHPLADEIPLVPDV
AGARRLLGLPDSGPVIAVLPGSRRSEIELIGPTFFAAMAIMQQREPGLRFVMPAATPALR
ALLQPLAQAHPHLALTLTDGDAQRAMTAADAVLVKSGTVTLEAALLKKPMVISYKVPWLT
GQIMRRQGYLPYVGLPNILAGRFVVPELLQHFATPEALADATLTQLHDEANRRTLVDVFT
QMHETLRRNTAECAAEAVECVIEARKPRS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcccaccagtgccttgcgtgtcgcaatggtggcgggcgagccgtcgggcgat
ctgctcgcggccgctctgctgggcgggctcgcgcggcggttgcccgcggatacgcgttac
tacggcatcggcgggccgcgtatggccgcgcagggcttcgatgcgcactggccgatggaa
aagctcgccgtgcgcggctatgtcgaggcccttcggcacattcccgagattttgcgcatc
cggcgcgatctgcggcatcaactgctagccgagcggccgcacgtgttcgtgggcgtcgat
gcgcccgatttcaacttcggtctcgaagagccgctgcgcgcggcaggtatcccgacgatc
catttcgtctgcccctcgatctgggcatggcgcggcggccgtatcaaaaagatcgcacgg
gccgtggatcatatgctgtgcgtgttcccgttcgagatcgagctgctcgaaaaggcgggg
gtggcggccacctatgtgggccatccgctcgccgacgagatcccgctcgtgcccgacgtt
gcgggtgcccgtcgcttgctcggcctgcccgactcggggcccgtgatcgcggtgctgccc
ggcagccggcgttcggagatcgaactcatcggcccgacgttttttgcggcaatggcgatc
atgcagcagcgtgagccgggcttgcgcttcgtgatgccggccgccacgccggcgttgcgg
gcattgctgcagccgctcgcgcaggcgcacccgcatctcgcgttgacccttaccgatggg
gacgcgcagcgtgccatgaccgcggcggacgccgtgctcgtgaagagcggcacggtgacc
ctcgaggcggcgctgctcaaaaaaccgatggtcatctcctacaaggtgccttggctcacg
gggcagatcatgcgccggcagggttatctgccctatgtgggattgcccaacattctggct
gggcgcttcgtcgtgcccgagttgctgcagcacttcgccacgcccgaggcactcgccgat
gccacgctaacgcagttgcacgacgaggcgaatcggcgcacgctcgtggacgtcttcacg
cagatgcacgagacgctgcgccgcaacacggccgagtgcgcggccgaagccgtcgaatgc
gtcatcgaggcgaggaaaccgcgctcatga
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