KEGG   Theobroma cacao (cacao): 18590608
Entry
18590608          CDS       T02994                                 
Name
(RefSeq) transcription elongation factor B polypeptide 1
  KO
K03872  elongin-C
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    18590608
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tcc04121]
    18590608
   03400 DNA repair and recombination proteins [BR:tcc03400]
    18590608
Ubiquitin system [BR:tcc04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Adoptor protein
     18590608
   Cul5 complex
     18590608
DNA repair and recombination proteins [BR:tcc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     18590608
SSDB
Motif
Pfam: Skp1_POZ
Other DBs
NCBI-GeneID: 18590608
NCBI-ProteinID: XP_007016290
UniProt: A0A061GZZ8
LinkDB
Position
9:complement(35916251..35918395)
AA seq 98 aa
MKKEDTVKLISAEGMEFVIDKEAAMVSQTIRNMLTSPGSFAETEHGEVTFPEISAVILEK
ICQYFYWSLQYSRGKETEFYIEPELTLELMMAANYLHT
NT seq 297 nt   +upstreamnt  +downstreamnt
atgaagaaagaagacacagtgaagctcatcagcgctgaagggatggaatttgttatcgat
aaggaagctgccatggtttctcaaaccatacgtaacatgcttacttctccaggtagtttt
gcggagacggagcatggggaggtgacttttccggagataagtgctgtcattcttgagaag
atctgtcaatatttttattggtctcttcaatattccaggggtaaagagactgagttctac
attgaacctgaactgactctggagctgatgatggctgctaattatctccatacttga

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