Theobroma cacao (cacao): 18604822
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Entry
18604822 CDS
T02994
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcc03400
]
18604822
Enzymes [BR:
tcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
18604822
DNA repair and recombination proteins [BR:
tcc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
18604822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
ResIII
Helicase_C
AAA_22
AAA_30
T2SSE
DUF4600
Motif
Other DBs
NCBI-GeneID:
18604822
NCBI-ProteinID:
XP_017973203
LinkDB
All DBs
Position
3:complement(23368781..23407877)
Genome browser
AA seq
2099 aa
AA seq
DB search
MLVQLPRLTNSLREPFDIDQAYLQRKIFLQSRNKATNGNQLDESDLARKIVHQWEEASVE
VRQLYKQFIGAVVELIDGELLPEGFREVALTAYRIFSGTVEGDEVAKNINEKKVELQKVI
GHGVSYANVQKVACLAQKLSQSQPRDSGDTLVFEKHVNGSDDGSEFGADLIFKAPARFLV
DVSLEDVELLGEENTAPSSAFVEGCYDKNGTINYHNAADSVNFNLSWLRDSCERIVRGST
SQLSRDDLAMAICRVLDSDKPGEEIAGDLLDLVGDSAFETVQDLILHRKELVDAIHHGLS
VLKSDKVNPNSRSRMPSYGTQVTVQTESEKQIDKLRRREEKRHRRGTDYAAESDMSAASF
SSLLEASERKSPFDDLIGSGQGPNSLAATALPQGTMRKHFKGYEEVIIPPTPTAQMKPGE
KLIEIKELDDFAQAAFRGYKSLNRIQSRIFQTVYCTNENILVCAPTGAGKTNIAMISILH
EIGQHFKDGYLHKDEFKIVYVAPMKALAAEVTSAFSHRLSPLNMCVKELTGDMQLSKNEL
EETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVE
STQTMIRIVGLSATLPNYLEVAQFLRVNPETGLFYFDSSYRPVPLLQQYIGISEQNFVAR
NELLNEICYKKVVDSLRQGHQAMVFVHSRKDTAKTAEKLVELARKYEDLELFKNDAHPQF
SLLKKEVVKSRNKDLVQLFEFGVGVHHAGMLRADRGLTERLFSDGILKVLVCTATLAWGV
NLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYY
LRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRLNPLAYGIG
WDEVIADPSLSLKQRALVADAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVE
TYNEMLRRHMNDSEVIEMVAHSSEFENIVVREEEQNELEMLARTSCPLEVKGGPSNKHGK
ISILIQLYISRGSIDTFSLVSDAAYISASLARIMRALFEICLRRGWCEMSLFMLEYCKAV
DRQIWPHQHPLRQFDKDLSPEILRKLEERGADLDRLHEMEEKDIGALIRYGPGGRLVKQY
LGYFPWIQLSATVSPITRTVLKVDLVISPDLIWKDRFHGAAQRWWILVEDSENDHIYHSE
LFTLTKKMARGEPQKLSFTVPIFEPHPPQYFIRAVSDSWLYAEAFYTISFHKLALPEART
THTELLDLKPLPVTSLGNSTYESLYNFSHFNPIQTQIFHVLYHTDNNVLLGAPTGSGKTI
SAELAMLRLFNTQPDMKVIYIAPLKAIVRERMHDWRKRLVSQLGKEMVEMTGDYTPDLMA
LLSADIILSTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYIS
SQTERAVRFVGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKYYCPR
MNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDENPRQFLSMPEEALQ
MVLSQVTDQNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPA
HLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFL
YEPFPVESSLREQLHDHINAEIVSGTICHKEDAVHYLTWTYLFRRLMVNPAYYGLESAED
ETLSSYLSRLVHSTFEDLEDSGCIKMTEDNVEPMMLGTIASQYYLSYMTVSMFGSNIGPD
TSLEVFLHVLSGASEYNELPVRHNEENYNEALSKRVRYMVDQNHLDDPHVKANLLFQAHF
SQLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLTSSIACMHLLQMVMQGLWFDQD
SALWMLPCMNNELAGALSEGGISSVQQLLDLPKATLQTVIGNFPASKLCQDLQYFPHIQM
KLKLLKKGPESEKSLQLNIRLEKTNLRRNASRAFAPRFPKLKDEAWWLILGNTFTSELYA
LKRVSFSDRLVTHMELPSDVTTFQGMKLIIVSDCYLGFEQEHSIQKLAAQCLEVGTKTV
NT seq
6300 nt
NT seq
+upstream
nt +downstream
nt
atgttggttcagctccctcggttgacaaattctttgagggaacccttcgacatcgaccaa
gcttatctccagcgcaagattttccttcaaagccgcaacaaagctaccaatggaaaccaa
cttgatgagtcagatcttgcaaggaagatagttcatcaatgggaagaagcttcagtagaa
gtgagacaactgtacaaacagtttattggggcagtggttgagctgattgatggagagttg
ctgcctgaagggttccgtgaggttgcattgactgcttaccgtatttttagtgggacagtg
gaaggtgatgaagttgctaaaaatataaatgagaagaaggtagaattgcagaaagttatt
ggtcatggagtttcatatgctaatgtgcagaaagtggcctgtttggcacaaaagctttct
cagtctcaaccaagagacagcggggacacgcttgtttttgagaagcatgtaaatggaagt
gacgatggttcagaatttggagctgacctcatctttaaagcaccagcccggtttctggtg
gatgtttctttggaggatgtggagttactgggtgaggaaaacactgcaccttcttctgca
tttgttgaaggatgctatgataaaaatggcactattaattatcacaatgctgctgatagt
gtaaacttcaatttgagttggttaagagattcctgtgaacggatagtcagagggagtact
tcacaactttcacgagatgacctggcaatggctatctgtcgagtacttgattcagacaaa
cctggtgaagagatagctggtgacttattggaccttgtcggggatagtgcatttgaaact
gttcaagaccttatattgcaccgaaaggagcttgttgatgctatccatcatggattatcg
gtactgaaatctgacaaagtgaatccaaattctcgatcacgcatgcccagctatgggact
caggttactgtccaaacagagtctgagaagcaaattgataaactacggcgcagggaggaa
aagcgtcatagacgtggaactgattatgcagctgagagtgatatgtcagctgcaagcttt
tcttctttacttgaagcaagtgagaggaaaagtccatttgatgatttgattgggtctggc
caagggcccaattctctggcagcaactgcccttccacaagggaccatgaggaagcatttt
aaggggtatgaggaggtcattattcccccaacaccaactgctcaaatgaaacctggggaa
aagctgattgagataaaggagttggatgactttgctcaagctgctttccgggggtacaag
tctctgaatcgtattcagagtcggatatttcaaactgtttattgcactaatgagaatata
ttagtttgtgcaccaaccggagcaggcaagacaaatatagccatgatatctattctacat
gagattggacagcatttcaaggatggctacttgcataaagatgaatttaagatagtttat
gtcgcccctatgaaggcactagctgctgaggtgacttcggcatttagccatcgcttatct
ccattgaatatgtgtgtgaaagaacttaccggagacatgcaactttctaagaatgaactt
gaagaaactcagatgatagttacaacccctgagaaatgggatgttattactcgcaaaagt
agtgacatgtcactctcaatgctggtgaagctcttgattattgatgaagtgcatcttctg
aatgatgacagaggtccagtgatagaagcactagtagctagaactcttcgtcaggtggag
tcaacacagacaatgatacgaattgtgggcctttcagctactctacctaattacttagag
gttgcacagttccttagagtgaatccagagacaggccttttttactttgattctagttac
cgtccagttcctcttttacaacaatatattggaattagtgagcagaactttgttgctcgc
aatgaattgttgaatgaaatatgctataagaaggttgttgattccttaaggcaaggtcat
caggcaatggtgtttgttcattcacggaaggatactgcaaaaacagctgagaaattggtt
gagcttgctcgaaagtatgaagatcttgagcttttcaagaatgatgcccatccccagttt
tccttactcaagaaggaagttgttaagtcaagaaacaaagatcttgtccagctttttgaa
ttcggggttggtgtccatcatgctggcatgttacgtgctgatagagggcttactgagagg
cttttttctgatggaatcttgaaggtacttgtttgcacagctactttggcctggggtgtt
aatcttcctgctcatacagttgtcatcaagggcactcaattatatgatccaaaggctggt
gggtggcgagacctaggcatgctagatgttatgcagatatttggaagggcaggtcgaccg
cagtttgacaaaagtggtgagggcatcataattacatctcatgacaaactagcctactat
ctccgattactgacaagtcagctccctatcgaaagtcagtttattagctcgttgaaagat
aatttaaatgcagaggtggcattgggtactgtaactaatgttaaggaggcttgcgcatgg
cttgggtacacctatctatttatcaggatgaggttgaatcccctggcatatggcattgga
tgggatgaggttatagcagatccttctctgagtttaaagcaaagagctctagtggcagat
gcagcacgtgcactagacaaagctaaaatgatgcgttttgatgagaaaagtgggaatttc
tattgtacagagcttggtcgtattgcaagtcacttctatattcaatattctagtgttgaa
acttacaatgaaatgctgagacgccatatgaatgatagtgaagtaattgaaatggttgcc
cattcttctgaatttgaaaacattgttgttcgagaagaggagcagaatgaattagagatg
ctggcacgcacgtcatgcccattagaagttaagggcggtccttcaaacaaacatggaaaa
atttcaattctcattcagctatacatatcgcgtggctccattgatactttttcattagta
tctgatgctgcctatataagtgctagtttggctcgtatcatgcgtgctttatttgaaata
tgcttgcgcagaggctggtgtgagatgtcattattcatgttggaatattgcaaggccgtg
gatcgccaaatttggccccatcaacatcctctcagacaatttgataaggatctttcacca
gaaatattgaggaagcttgaagaacgaggggctgatttagatcgccttcacgagatggaa
gaaaaagacattggcgctctgattcgttatggacctggaggaaggttggttaagcaatat
ttaggatatttcccttggatccagttatcagctactgttagtccaataacaaggactgtt
ttaaaggtggatttggttatatctcctgacttaatttggaaagatcgttttcatggtgct
gcacagcgttggtggatacttgttgaggactctgagaatgaccacatctaccactcagaa
ctttttacactgacaaagaagatggctagaggagaacctcagaagctttcctttactgtg
ccgatatttgaaccacaccctcctcagtacttcattcgtgctgtttctgattcttggttg
tatgcggaggctttctacactatatcattccataagctagcactgccagaggctcgaacc
actcatacagagcttcttgatttaaagcctctgcctgtaacttcacttggcaacagcact
tatgagtccttgtataacttttcacattttaatccgatacaaacgcagatctttcatgtc
ctgtatcacacagataataatgttctattaggagctcctactggtagtgggaaaaccatt
tctgctgaacttgctatgcttcgcctcttcaatactcagcctgatatgaaggttatctac
atagcacctttgaaggccattgtacgtgaaaggatgcacgattggaggaagcgtcttgtc
tctcagcttgggaaagagatggttgaaatgaccggggattatactcctgatttgatggcc
cttttgtcagctgatataattctatctactccggagaagtgggatggaattagtcggaat
tggcatagtcgaagctatgtcacaaaggttggtcttatgatattggatgagattcacttg
ctgggagctgatcgtggacctatccttgaggttattgtttcaaggatgagatatatatca
tcacaaacagagcgtgcagtacgctttgttggcctttctacagctttggcaaatgcaggt
gatttggctgattggttgggtgttggtgaaattggactcttcaattttaagccaagtgtg
agacctgtacctcttgaagttcatatccagggatatcctggaaagtactactgcccaagg
atgaatagcatgaacaaaccagcatatgctgcaatatgcacccattcaccaacaaaacca
gttcttatttttgtttcatctcggcgtcagacaaggctcactgctttggaccttattcag
tttgcagcatcagatgaaaatccgaggcaatttttgagcatgccagaagaagctctgcag
atggtgctttcccaggtcactgatcagaacctgaggcacactttacagtttggcattggg
ttgcatcatgctggactgaacgacaaagatagatctctggttgaggaacttttcgcaaac
aacaagattcaggttttggtttgtacaagcacattggcgtggggtgtaaatcttccagcc
catttggtaattataaagggaacagagtattatgatgggaaaacaaaaagatatgtcgat
ttccctattacagatattttgcaaatgatgggtcgtgcaggtcgtccacaatatgatcaa
catgggaaggcagtcattcttgttcatgaacccaaaaagagcttctacaaaaagtttcta
tatgaaccatttccagttgagagtagcctgagggagcagttgcatgatcatataaatgca
gagattgtttctggaactatttgccataaagaagatgctgtgcattatcttacttggacc
tacttattccgcagactgatggttaatccagcctactatggcttggagagtgcagaagat
gaaacactaagttcttacttgtccagattggtgcatagcacctttgaggatctggaagat
agtgggtgcattaagatgactgaggacaatgtagagcctatgatgttgggtacaatagca
tctcagtattaccttagctacatgactgtatcaatgtttgggtcaaacattgggccagat
acatctcttgaagtgtttttgcacgttttgtctggtgcttctgagtataatgaacttcct
gtgcggcataatgaggaaaattataatgaagcattatctaagagagtccggtatatggtg
gatcagaatcaccttgatgatccacatgtcaaagcaaaccttctctttcaggcacatttt
tcgcagttggatttaccaatcagtgactatgtcactgacttaaaatcagtgttggatcaa
agcatacgcatcattcaagccatgatagatatatgtgccaatagtggatggcttacaagc
tcgattgcttgcatgcatcttttgcagatggtcatgcagggtttgtggtttgatcaggat
tctgccctgtggatgttgccgtgcatgaataatgaacttgctggtgcattgagcgaggga
ggaatttccagtgtgcaacaactattagatcttcctaaggcaacattgcaaactgtgatc
ggaaattttcctgcttcaaaattatgtcaggatctgcagtatttcccccatatacaaatg
aaattaaaactgctgaagaagggcccagagagtgaaaagtctctccaactgaacatcaga
ttggagaagacaaatttaaggcggaatgcatcaagggcatttgcccctcgattccctaag
cttaaagatgaagcatggtggttgattcttggtaacacctttacttccgaattatatgct
ctgaagagagtttctttctctgatcgcttagttacccacatggagttaccatcagatgtg
accacgtttcaggggatgaaactgattatagtttcagattgctatcttggttttgaacaa
gaacattccattcaaaaacttgctgcacaatgcttggaagttggaaccaagaccgtttaa
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integrated database retrieval system
