Theobroma cacao (cacao): 18610698
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Entry
18610698 CDS
T02994
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18610698
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tcc01009
]
18610698
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcc03041
]
18610698
Protein phosphatases and associated proteins [BR:
tcc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
18610698
Spliceosome [BR:
tcc03041
]
Common components
Common spliceosomal components
SR proteins
18610698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_DEAH11
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
18610698
NCBI-ProteinID:
XP_017978212
UniProt:
A0AB32WF88
LinkDB
All DBs
Position
1:complement(502027..504907)
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AA seq
223 aa
AA seq
DB search
MADSPRKRNSKSPSPWREQSRSRSRSRSRSRSRSRSRSWSRPRHGSRSHSRGRSRSRSRG
RVDAGNPGNTLYVTGLSQRVSERDVEEHFSKEGKVVSCFLVVEPRTRISRGFAFVTMDNV
EDANRCIKYLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKNTRDYGRGDRGRYRGGRD
DNGYRRSPRRSPYRGRDYSPRYSPHAGRSRRERSCSPYSRGSR
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctcctcgtaaaaggaattctaagtccccctccccatggagagagcagtcc
aggtcacgatccagatctagatccaggtctagatctaggtcaagatcccgctcctggtca
aggccaaggcatgggtccaggtcacatagtcggggcaggtcaaggtcaagaagtcgtggc
agggttgatgctggaaatcctggaaacacactttacgtgactggtctatctcaaagggtc
tcagagagggacgttgaagaacacttctcaaaggagggaaaggttgtatcatgttttctt
gttgtggaacctcgtactcgcatatctcgtggttttgcttttgttactatggacaatgtt
gaggatgccaaccgttgcattaagtatctcaaccaatcagttttagagggtcgatacata
actgtggagaggtcacgtaggaaacgtccaagaactccaactccggggcactatcttggg
ctgaaaaataccagggactatggtcgtggtgaccgtggcaggtaccgtggtggtcgtgat
gacaatggatatcgtcgatctccaagacgctcaccatatagaggtcgtgattattctcca
agatattctcctcatgctggaagatcaaggagggagcgttcttgttcaccttattcacgt
ggatctaggtga
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