Tigriopus californicus (tidepool copepod): 131880081
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Entry
131880081 CDS
T09700
Name
(RefSeq) sodium leak channel NALCN-like
KO
K21863
sodium leak channel non-selective protein
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131880081
Ion channels [BR:
tcf04040
]
Voltage-gated cation channels
Sodium leak channel, non-selective
131880081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
YfbR-like
Motif
Other DBs
NCBI-GeneID:
131880081
NCBI-ProteinID:
XP_059082571
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All DBs
Position
5:7834830..7842010
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AA seq
1720 aa
AA seq
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MLTRKLSVTGEFSTALADYGPDETLSEGNNIVWTNRSVVRKVIRLLSLASLISVMLNTPK
TFEQCPPLLYVTYLTDWVCALVFLLEMITKIREKGLLYRDSAYLKDRWCQFDSTMLFFLF
TSIILQTLEIWGVAHRYSPLSIIRAPRPLIMIRFIRVFLKFSMPKSRINQIFKRSSQQIY
NVTIFFLFFMSLYGLLGVQFFGELNYHCVRAGVKAELVTINDLTIPDSYCNPKPDSDEGN
KCPPGFDCIKLSNLGKVITGFTGFGEFLTSVFTVYQAASQEGWVYIMYRAADSVAPWKAV
FYFTTMIFFLAWMVRNVFIAVITETFNEIRVQFQEMWGERESLEETDHNQVLNGNAKAWK
LVTVYENENQGFAPSFCQAILTSPVYHIFIMIVTLTNAAITASISFKHTRDEKPREYFFE
DQKYLEFWFTMLYNFEVVFKMFCLGVQGYFIRTIHKFEFLLAVTTTIHILPFDGLFLSWL
SIFQVLRVVRLIKASPMLEDFVYKIFGPGRKLGSLIIFTMCLLVITSSISMQLFCSLRGL
DKFETFPYAFMSMFQILTQEAWPEVMSRTMEMVDSRLTFVVAVYFILYHLFVTLIVMSLF
VAVILDNLELDEDAKKIKQLKMREESSDIKEDLPLRLRIFERFPQRPRFCLLNRTPSEYS
TPKVRESFVTKFVYDSENSADILDITTAHENGYDENQTSLRFRKKCNPCLLSSPIRRTFN
SSVIKKSSVSNIIWSVRRSLRGSQLFNKRGGTYRINDSSKENGFIPGMNTIATSNRPQNI
DIKLLHAKKQQAEMRRNQKEEDLRENHPYFDRPLFAVPRESTFRKICQMLKNAQYDATLK
DPVTGKERKVRFKTFHKLMGLVTYVDWTMIIITTLTTLSMTAETPEYRVMDNMLLQIMDY
VFVMGMGLELTLKVLAEGMLFTPKALVKDVSGILDLFIFSVSFLWICWMPTKVEQNSIAQ
VVMILRCCRPLRIFILVPHMRKVVQELCRSFKEIFLVGVLLLVLIFIFASYGVNLYGMRF
ASCNDVNIKTRDECTGIFRAEVFVTKMNIPNTPNCPGPGLYTPRVWMNPRRFNFDNIRNS
MLALFEVLSFKGWVDLRDVIITRMGLSSATYIHMYVFLGSMIGLTLFVGVVIANYRENKG
TALLTVDQMRWSDLKKRLKIAQPLHVPPRPETSRFQSFIYDIVQHLYFKRLIAALVLFNS
FLLCVKWEEEEDIPQTGFDTVEQANSTSSPMVGQMLIRQSLATASSSLTICFVIEVIMKM
IAFTPYGYWQSRRNRGDLLVTVLGVIWIILNHAIYNEYTLTLGYVVIILRFFTITGKHAT
LKMLMQTVFVSMFKSFFIIMGMFLLITVYALAGVILFGSVKYGEAINRQANFRTAWYGMA
MLFRTVTGEDWNRVLHDCMLYPPYCTHQPGASFWETDCGNVVAGIVYFCSFYVIITYIVL
NLLVAIIMENFSLFYSNEEDALLSYADIRNFQNTWNIVDVNQRGMIPVRRVKFILRLLKG
RLEVDPQKDNLLFKHMCYELERLHNGEDVTFHDVLSMLSYRSVDIRKALQLEELLAREEL
EYLIEEEVAKITIRNWLDGCLRRIRDKEQSLIAGLRAMNDPVLSALKPLEELEQENDDDW
VSQNRTTITALETEEKWLGNKDGVQEDEYPQQQSQPQMKVQKTAMVQSSQTKTFLSSESS
SRVKAASPLKTPSIDPCLSKAHISELQSWWQSEIDQDDSE
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atgctgactcgaaagttaagtgttaccggagagttctccacagccttggctgattatggc
ccggacgagaccttgtccgaaggcaacaacattgtgtggacgaatagatccgtggttcgg
aaagtgatcagacttctgtccttagccagtctcatctcagtcatgttgaacacgcccaaa
acattcgagcaatgtcctccattgttgtatgtgacgtatctaacggattgggtgtgtgcc
ttggtattcctcttagaaatgatcactaagatacgagagaagggcttgttatatcgagat
tcggcctatttgaaagatagatggtgccaatttgactccaccatgcttttctttttgttt
acctccatcatccttcaaacactagaaatatggggagtagcacatcgatattcaccactt
tcaatcatccgagcacctcgaccccttatcatgatccgattcattcgtgtcttcctgaag
ttttccatgcccaaatcaaggattaatcagatcttcaagagatccagccaacagatatac
aatgtcaccattttctttcttttcttcatgtccctctacggtctgttgggtgttcaattc
tttggtgagcttaactaccactgcgtccgcgctggagtcaaggcggaattggtcaccatc
aacgatctaactattcctgactcttattgcaatcccaaaccggactcggatgaaggaaac
aagtgtcctcccgggttcgactgcataaaactgagtaacttggggaaagtcattaccgga
ttcactggatttggcgaattcctcactagcgttttcacagtctatcaagccgctagtcaa
gaggggtgggtttatatcatgtatcgagccgcggactcggttgctccctggaaagcagtg
ttttacttcacgaccatgatctttttcctcgcgtggatggtgaggaacgtctttatcgcc
gtgattacggagactttcaacgagattcgggtccaattccaagagatgtggggtgaacgt
gaaagcctcgaagaaaccgatcataatcaggtgttaaatggcaatgcaaaagcgtggaaa
ctcgtcaccgtttacgagaacgagaatcaaggatttgctccgagtttctgccaagcaatt
ctaacatcgccagtttatcacatattcataatgatagtcactttgaccaatgcagccatc
acagccagcatttcattcaagcatacccgggacgagaaaccgagggaatacttctttgaa
gatcaaaagtatctcgagttttggttcaccatgttgtacaactttgaagtggtgttcaag
atgttctgtctgggcgttcagggttatttcattcgaactattcataagtttgaatttctt
ttggcggtcaccacaacgattcatattcttcctttcgatggtctattcttatcgtggctc
tccatcttccaagtgctccgcgttgtccggttaatcaaggcatcaccaatgttggaggac
ttcgtgtacaaaatatttggtccaggaagaaagttgggaagcttaatcatcttcacgatg
tgtcttttggtcatcacatcgagtatatcaatgcaactcttttgctctctaaggggtttg
gacaaatttgagacctttccatatgcttttatgtctatgtttcaaattctgacccaagaa
gcgtggccggaggtgatgtccaggacaatggaaatggtggactcaagactgaccttcgtt
gtggctgtttatttcatcttatatcatttgtttgtcacacttattgtgatgtctctcttt
gtggctgttattttggacaacttggagttggacgaggatgccaagaaaatcaagcaatta
aagatgagggaggaatcgtcagatatcaaagaagatctaccattaaggttgcgcatattt
gaaaggtttccacaaaggcccagattctgtctcctcaatcgaactccttcagaatattcc
acaccaaaagtgcgtgagagctttgtcaccaagtttgtatacgactccgaaaactcggcc
gacatcctggatatcaccacggctcatgagaatggatacgacgaaaatcaaacgtcactt
cgatttcgcaagaaatgtaatccatgtcttttgtcatctcctatacgaaggacttttaac
tcgtcagtaatcaagaaatcttcggtctccaacatcatttggtcggttcgtcgctccctc
agaggctctcaactcttcaacaaacggggaggaacttatcgtatcaacgacagctccaaa
gaaaatgggttcataccgggcatgaacacgattgccacctcgaaccgccctcaaaacatt
gatatcaaactacttcacgccaaaaaacaacaagctgagatgagacgcaaccagaaggag
gaagatctgcgagaaaatcacccgtactttgaccgacctctcttcgccgttcctagagag
tctacttttcgaaaaatttgccaaatgttaaaaaacgcccaatacgatgctactctgaag
gatcccgtcacagggaaggagcgcaaggttcgattcaaaacatttcataagctaatggga
ttggttacttacgtggattggactatgatcatcattaccacactcaccacactttcgatg
acggctgaaacaccagagtatagagttatggacaatatgctccttcaaatcatggactac
gtcttcgtcatgggcatgggattggaactgacactcaaggtcttggccgagggaatgctc
ttcactcccaaggccttggtcaaggatgtcagcggtattctggacttgttcatattcagc
gtaagcttcttgtggatctgttggatgcccaccaaggttgaacaaaattcaatcgcccaa
gtggttatgatcctgaggtgttgtcgacctttgagaatcttcattctcgtaccgcatatg
cggaaagtggtacaagaactttgccgtagttttaaggagatcttcctcgttggggtcttg
ctcttggttctaattttcatctttgccagttatggcgtgaacttgtatggaatgcggttt
gcctcatgtaacgacgtgaacatcaaaacccgagacgagtgcacgggcatcttccgagcc
gaggtcttcgtaacaaagatgaacatccccaacacacccaattgtccgggaccagggctc
tacacaccacgggtttggatgaatcctcgtagattcaatttcgataacatccggaactcg
atgctggctttatttgaggtcctgtcattcaaaggatgggtggatttacgggacgttatc
atcaccagaatgggactatcctccgctacttacatacacatgtacgtgtttctgggcagt
atgattggactgacactctttgtgggtgtagttatcgccaattaccgcgaaaataaaggc
acagcgcttctcaccgtggatcaaatgcgatggagcgatcttaagaagcgattaaaaatc
gctcaaccacttcatgttcctccgcgtccagaaacttccaggtttcaatcgttcatctac
gacattgtccaacatctctacttcaaacgactgattgctgccctggtattgttcaacagt
tttttgctctgtgtcaaatgggaagaggaagaagatattccgcaaacgggttttgatacg
gtcgaacaggccaattccacctcatcccctatggtgggacaaatgttgatccgtcaatcc
ctggctacagctagttcatcattgaccatttgctttgtcattgaagtgatcatgaaaatg
atcgctttcaccccctatggatactggcaatctcgtcgaaacagaggcgatcttctggtc
accgtactcggtgtgatttggatcatcttgaatcacgccatctacaatgagtacaccttg
accttgggctatgtggtgattattctgcgcttcttcacgatcacgggtaaacatgcaacg
ttgaagatgttaatgcagactgtatttgtgtccatgttcaagagcttcttcatcatcatg
ggaatgttcctgctaattacggtgtatgccttagcgggagttattctgtttggatccgtc
aaatatggggaggccatcaatcgacaagccaacttccggacagcttggtacggcatggcc
atgctcttccgaacggtgactggcgaagattggaaccgcgtgcttcatgattgtatgctc
tatcctccctattgtactcatcaacccggagccagtttttgggagacggattgtggcaat
gttgtggctggcattgtttatttctgcagtttttatgtcattatcacctatattgtttta
aaccttttggtagccatcatcatggaaaacttttcgttgttctattccaacgaagaggat
gccctcttgtcgtatgctgatattcgcaacttccagaatacgtggaacatagtcgatgtg
aaccaacgcggcatgattccagtcagaagagtcaagttcatcctccgtcttctcaagggc
cgattggaagtcgatccacagaaggacaaccttttattcaagcacatgtgttacgagttg
gagaggcttcacaatggtgaagatgtcacgttccatgatgttctgagtatgttatcttac
cgttctgtggatatccgaaaagcattgcaactagaggagcttttagcccgagaggaactg
gagtatctaatcgaggaagaagtggccaaaatcaccatcagaaattggttggatggctgc
ttgcgacgcattcgggacaaggaacaaagtcttatcgctggattgagagccatgaacgat
cccgtcttgagtgcgctgaaaccattggaagaattggagcaagagaacgatgacgattgg
gtcagtcagaatcgcacaactatcaccgccttggagacagaagaaaaatggttgggcaac
aaagacggggtgcaagaagacgaatacccacaacaacagagtcaaccacaaatgaaggtc
cagaagaccgcaatggttcaatcctcacagaccaaaacatttctaagtagtgagtcatct
tcccgagtcaaagccgcttcaccgttgaaaactccatccattgatccctgcttgtccaaa
gcccacatcagcgagcttcaaagttggtggcagtcagaaattgatcaagatgattctgaa
tag
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integrated database retrieval system
