Tigriopus californicus (tidepool copepod): 131885605
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Entry
131885605 CDS
T09700
Name
(RefSeq) protein PALS2-like isoform X1
KO
K28619
MAGUK p55 subfamily member 6
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
131885605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tcf04990
]
131885605
Domain-containing proteins not elsewhere classified [BR:
tcf04990
]
PDZ domain-containing proteins
MAGUK family proteins
131885605
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
PDZ
SH3_1
L27
PDZ_6
SH3_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
131885605
NCBI-ProteinID:
XP_059089683
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All DBs
Position
8:719211..761018
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AA seq
693 aa
AA seq
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MSTSSPSLVSSSSSATEKLASNNHHNGHHRRNGRNPAGGGEDEGGGTSTEEEVEPGEAEG
EDEEDDDEEGETTALHVQNGRHSAPLASSTTALISKATIMMPKIPTGVVRRRESGLTRML
GSMTKLLGKNLARSTDLLFLKTLTGSNSVIRQPPKVTSEQEAPPSYLPVTHDSLRLIEQA
KTICEQRIYLDEAKELFSLISSKWLQAVLEIHDEVAAQIQNYCEGVEYIDGVSSIEEDDE
DDDLKSRLSSLPEDKDGETKVEEEEEEVKVDTFRVIGVRRKAGQCLGLTVRLEGIRIKVA
RILIDSVIDRQGLLQTGDIILQANGKDVKNPEELQKAIEDSGEFIVFKIMPNPEESPTTE
TEPTKFGKDKFFVRAMFDYNPGGDNLLPCQDIGLPFRHGDIMEIVNWSDPSWWQARKVNS
KERPGLVPSQDLEERRQCFVKNGFVAPTTCCGTTGRREKRKYEYHVRKNLDFDKAELMLY
EAVEKMPPFSRKTLVLVSPQGLPKQSLIHKLVDSNPDMYGTTVPLTSRPMGDYEIDGESC
WFVDHERMLDGLENNEFLDVGEHDNYLFGTTLESIRGVMSENKLCVLDVRPEALKLLHNS
TEFLPFVIYLNPPPPDDYKALIYNGRASQNIELADSRAKRMAEESEQIKREFQKYFDLEF
DYEDPESTLDKILGSLQKLMSETQWVPRNWVYS
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtccacatcctcgccttcactagtctcatcttcctcttcggccacggagaaattggcc
tcgaataatcatcataatggacaccatcgccgcaatgggcgtaatccagccggaggcggg
gaggacgagggaggtggaacttcaacggaggaagaggtggaacctggagaggccgaggga
gaagacgaggaggacgacgacgaggagggtgaaaccacggcccttcacgttcaaaatggc
cgccattccgcccctctggcttcgtccaccactgccctcatatcaaaagccacgatcatg
atgccaaaaatacccacgggcgtagtgcgaaggcgagagtcgggtctgacccgaatgcta
gggagcatgaccaagttgctaggcaagaatctggcccgatccacggatctcttgttcctg
aagacgctcacagggtccaacagtgtcatccgacaaccacctaaagtaaccagcgaacaa
gaggcgcccccttcgtatctgcccgtgactcacgactccttgcgattgatcgagcaagcc
aaaaccatttgtgaacaacgcatctacctcgatgaagccaaggagctgttctcgctcata
tccagcaaatggctacaggccgtcttggagatccatgacgaagtggcagcccagattcag
aactattgcgaaggagtcgaatacattgacggagtgagttccatcgaggaggacgacgag
gacgacgacctcaagagccgattgtcctcattacccgaggacaaggatggcgagaccaaa
gtggaggaggaggaagaagaagtcaaagtggatacgttcagagtcattggcgtgcggcgg
aaggcaggacagtgtctgggactgacggtgcggttggaaggaatacggatcaaagtggct
cgcattctcattgacagtgtgatcgaccgtcaaggtctgcttcaaaccggtgatatcatc
ctccaagccaacggcaaggacgtcaaaaaccccgaggaacttcaaaaggccattgaggat
agcggggagttcatagtattcaaaatcatgcccaatccagaggagagtccaaccaccgag
accgagcccactaagttcggcaaagataagttctttgtacgtgccatgtttgattacaat
cctggtggtgataaccttcttccttgtcaagatattggccttccattcaggcacggagac
atcatggagattgtcaattggtcggatcccagttggtggcaagctcgcaaagtcaattcc
aaagagagacctgggctggttccatcgcaagatctcgaagagcgtcggcaatgcttcgtc
aagaacggattcgtggcacccaccacgtgttgcgggacaacaggtcgccgtgagaagcgc
aagtatgagtaccacgtacgcaagaatctggactttgacaaggccgagctaatgttgtac
gaggccgtggagaagatgcctccgttcagtcggaagactttggtgctcgtgtcgccccag
ggattacccaagcaatcacttatccacaagttggtggattccaatccagacatgtatggg
accaccgtgccattgacgagtcgtcccatgggagactacgagatcgatggcgagtcttgc
tggtttgtggatcatgagcgaatgctcgatgggctggaaaacaacgaattcctggatgtc
ggggaacatgacaattatctgtttggaaccaccctcgaatccattcgaggggtgatgtcc
gagaataaactgtgcgttttggacgtgagacctgaggctctgaagcttttgcacaattcc
accgagttcttaccgtttgtgatatatttgaaccctcctccaccggacgattacaaggcc
ctcatttataacggccgcgccagccagaacattgaacttgccgactctcgagcgaaacgg
atggccgaggagagtgaacagattaagcgcgagttccaaaagtactttgaccttgaattt
gactacgaagacccggaatccacgttggacaagatccttggctcgcttcaaaaattgatg
tcagagacccaatgggttccgcgcaattgggtctattcttga
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